FFCP PHASE1:Hg19::chr2:43768420..43768427,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63892 | |EntrezGene=63892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19217 | |HGNC=19217 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_ENST00000462185_5end | |association_with_transcript=14bp_to_ENST00000462185_5end | ||
|cluster_id=chr2:43768420..43768427,- | |||
|coexpression_cluster_id=C116 | |coexpression_cluster_id=C116 | ||
|description=CAGE_peak_5_at_THADA_5end | |description=CAGE_peak_5_at_THADA_5end | ||
|id=chr2:43768420..43768427,- | |id=chr2:43768420..43768427,- | ||
|ontology_enrichment_celltype=CL:0002076!3.65e-20!43;CL:0002368!1.76e-19!13;CL:0000223!3.32e-13!59;CL:0002202!1.05e-10!9;CL:0002632!1.05e-10!9;CL:0002621!1.30e-09!3;CL:0000622!2.74e-09!5;CL:0002328!4.68e-09!3;CL:0002623!5.35e-09!3;CL:0002057!7.09e-08!42;CL:0000154!1.01e-07!6;CL:0002159!3.26e-07!13;CL:0000860!3.72e-07!45;CL:0002251!4.49e-07!21 | |ontology_enrichment_celltype=CL:0002076!3.65e-20!43;CL:0002368!1.76e-19!13;CL:0000223!3.32e-13!59;CL:0002202!1.05e-10!9;CL:0002632!1.05e-10!9;CL:0002621!1.30e-09!3;CL:0000622!2.74e-09!5;CL:0002328!4.68e-09!3;CL:0002623!5.35e-09!3;CL:0002057!7.09e-08!42;CL:0000154!1.01e-07!6;CL:0002159!3.26e-07!13;CL:0000860!3.72e-07!45;CL:0002251!4.49e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002621;2.94e-43;3!CL:0000307;7.86e-20;3!CL:0002202;8.86e-15;9!CL:0002632;8.86e-15;9!CL:0002368;2.03e-10;13!CL:0002159;1.02e-09;14!CL:0002076;1.84e-09;42!CL:0000317;2.07e-08;2!CL:1000448;2.07e-08;2!CL:0002308;2.07e-08;2!CL:0002140;2.07e-08;2!CL:0000362;3.14e-07;9!CL:0002251;5.12e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,4.55e-43,3;CL:0000068,6.50e-20,3;CL:0000069,6.50e-20,3;CL:0000307,6.50e-20,3;CL:0000377,6.50e-20,3;CL:0002202,8.67e-15,9;CL:0002632,8.67e-15,9;CL:0002076,6.55e-12,42;CL:0002368,2.00e-10,13;CL:0002159,1.14e-09,14;CL:0000223,1.52e-08,58;CL:0000317,2.00e-08,2;CL:1000448,2.00e-08,2;CL:0002308,2.00e-08,2;CL:0002140,2.00e-08,2;CL:0000362,2.95e-07,9;CL:0002251,5.45e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000377;7.86e-20;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;5.55e-16;1!DOID:0070004;5.55e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,5.56e-16,1;DOID:0070004,5.56e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0001949!1.30e-09!3;UBERON:0000165!4.63e-09!28;UBERON:0000930!4.63e-09!28;UBERON:0004815!4.68e-09!3;UBERON:0002031!4.68e-09!3;UBERON:0001004!1.02e-07!72;UBERON:0002090!1.65e-07!6;UBERON:0000166!4.99e-07!21;UBERON:0002185!7.24e-07!4;UBERON:0003102!8.82e-07!95;UBERON:0004119!9.76e-07!169;UBERON:0000925!9.76e-07!169;UBERON:0006595!9.76e-07!169;UBERON:0000075!1.00e-06!13;UBERON:0005944!1.00e-06!13;UBERON:0004288!1.00e-06!13;UBERON:0003089!1.00e-06!13 | |ontology_enrichment_uberon=UBERON:0001949!1.30e-09!3;UBERON:0000165!4.63e-09!28;UBERON:0000930!4.63e-09!28;UBERON:0004815!4.68e-09!3;UBERON:0002031!4.68e-09!3;UBERON:0001004!1.02e-07!72;UBERON:0002090!1.65e-07!6;UBERON:0000166!4.99e-07!21;UBERON:0002185!7.24e-07!4;UBERON:0003102!8.82e-07!95;UBERON:0004119!9.76e-07!169;UBERON:0000925!9.76e-07!169;UBERON:0006595!9.76e-07!169;UBERON:0000075!1.00e-06!13;UBERON:0005944!1.00e-06!13;UBERON:0004288!1.00e-06!13;UBERON:0003089!1.00e-06!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.94e-43;3!UBERON:0003929;5.56e-19;7!UBERON:0003350;1.08e-16;8!UBERON:0001828;1.08e-16;8!UBERON:0010371;7.19e-12;31!UBERON:0000486;2.44e-11;12!UBERON:0004807;1.15e-10;22!UBERON:0003729;1.64e-10;13!UBERON:0007196;4.18e-09;15!UBERON:0001558;4.18e-09;15!UBERON:0003126;4.75e-09;7!UBERON:0001005;4.75e-09;7!UBERON:0002419;2.07e-08;2!UBERON:0007771;2.07e-08;2!UBERON:0003297;2.07e-08;2!UBERON:0001821;2.07e-08;2!UBERON:0003487;2.07e-08;2!UBERON:0001820;2.07e-08;2!UBERON:0000161;2.32e-07;19!UBERON:0000166;2.32e-07;19!UBERON:0000344;5.12e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.55e-43,3;UBERON:0003350,1.27e-16,8;UBERON:0001828,1.27e-16,8;UBERON:0003729,1.81e-10,13;UBERON:0007196,4.13e-09,15;UBERON:0001558,4.13e-09,15;UBERON:0003126,4.39e-09,7;UBERON:0001005,4.39e-09,7;UBERON:0002419,2.00e-08,2;UBERON:0007771,2.00e-08,2;UBERON:0003297,2.00e-08,2;UBERON:0001821,2.00e-08,2;UBERON:0003487,2.00e-08,2;UBERON:0001820,2.00e-08,2;UBERON:0005089,2.00e-08,2;UBERON:0005088,2.00e-08,2;UBERON:0004807,2.16e-08,28;UBERON:0000344,5.45e-07,20 | |||
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| ||
|short_description=p5@THADA | |short_description=p5@THADA | ||
}} | }} |
Latest revision as of 08:30, 17 September 2015
Short description: | p5@THADA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_THADA_5end |
Coexpression cluster: | C116_myeloma_xeroderma_tonsil_CD19_spleen_lymph_trachea |
Association with transcript: | 14bp_to_ENST00000462185_5end |
EntrezGene: | THADA |
HGNC: | 19217 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 4.55e-43 | 3 |
duct epithelial cell | 6.50e-20 | 3 |
branched duct epithelial cell | 6.50e-20 | 3 |
tracheal epithelial cell | 6.50e-20 | 3 |
tracheoblast | 6.50e-20 | 3 |
epithelial cell of tracheobronchial tree | 8.67e-15 | 9 |
epithelial cell of lower respiratory tract | 8.67e-15 | 9 |
endo-epithelial cell | 6.55e-12 | 42 |
respiratory epithelial cell | 2.00e-10 | 13 |
general ecto-epithelial cell | 1.14e-09 | 14 |
endodermal cell | 1.52e-08 | 58 |
sebum secreting cell | 2.00e-08 | 2 |
epithelial cell of sweat gland | 2.00e-08 | 2 |
epithelial cell of skin gland | 2.00e-08 | 2 |
acinar cell of sebaceous gland | 2.00e-08 | 2 |
epidermal cell | 2.95e-07 | 9 |
epithelial cell of alimentary canal | 5.45e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.55e-43 | 3 |
epithelium of mucosa | 1.27e-16 | 8 |
gingiva | 1.27e-16 | 8 |
mouth mucosa | 1.81e-10 | 13 |
tracheobronchial tree | 4.13e-09 | 15 |
lower respiratory tract | 4.13e-09 | 15 |
trachea | 4.39e-09 | 7 |
respiratory airway | 4.39e-09 | 7 |
skin gland | 2.00e-08 | 2 |
epidermis gland | 2.00e-08 | 2 |
gland of integumental system | 2.00e-08 | 2 |
sebaceous gland | 2.00e-08 | 2 |
skin sebaceous gland | 2.00e-08 | 2 |
sweat gland | 2.00e-08 | 2 |
sweat gland placode | 2.00e-08 | 2 |
sebaceous gland placode | 2.00e-08 | 2 |
respiratory system epithelium | 2.16e-08 | 28 |
mucosa | 5.45e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 5.56e-16 | 1 |
myeloma | 5.56e-16 | 1 |