FFCP PHASE1:Hg19::chr3:134044856..134044890,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:134044856..134044890,+ | |||
|coexpression_cluster_id=C393 | |coexpression_cluster_id=C393 | ||
|description=CAGE_peak_at_chr3:134044856..134044890,+ | |description=CAGE_peak_at_chr3:134044856..134044890,+ | ||
|id=chr3:134044856..134044890,+ | |id=chr3:134044856..134044890,+ | ||
|ontology_enrichment_celltype=CL:0002076!3.09e-22!43;CL:0002368!7.41e-18!13;CL:0000223!1.17e-17!59;CL:0000349!1.12e-16!3;CL:0002577!1.12e-16!3;CL:0002328!4.23e-16!3;CL:0002537!3.90e-10!5;CL:0000066!5.16e-10!254;CL:0002231!3.34e-07!3 | |ontology_enrichment_celltype=CL:0002076!3.09e-22!43;CL:0002368!7.41e-18!13;CL:0000223!1.17e-17!59;CL:0000349!1.12e-16!3;CL:0002577!1.12e-16!3;CL:0002328!4.23e-16!3;CL:0002537!3.90e-10!5;CL:0000066!5.16e-10!254;CL:0002231!3.34e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002577;1.55e-98;3!CL:0000349;1.44e-43;19!CL:0002537;2.72e-27;5!CL:0002328;2.59e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.55e-98,3;CL:0000349,1.44e-43,19;CL:0002537,2.72e-27,5;CL:0002328,2.59e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.22e-23!14;UBERON:0000158!8.22e-23!14;UBERON:0004815!4.23e-16!3;UBERON:0002031!4.23e-16!3;UBERON:0000478!9.34e-13!24;UBERON:0001987!1.26e-12!4;UBERON:0004340!1.26e-12!4;UBERON:0003124!2.52e-12!7;UBERON:0004923!2.78e-12!57;UBERON:0002185!3.37e-12!4;UBERON:0000305!3.86e-12!7;UBERON:0004871!1.25e-10!8;UBERON:0000485!3.65e-09!9;UBERON:0000065!2.45e-07!53;UBERON:0004119!4.27e-07!169;UBERON:0000925!4.27e-07!169;UBERON:0006595!4.27e-07!169 | |ontology_enrichment_uberon=UBERON:0005631!8.22e-23!14;UBERON:0000158!8.22e-23!14;UBERON:0004815!4.23e-16!3;UBERON:0002031!4.23e-16!3;UBERON:0000478!9.34e-13!24;UBERON:0001987!1.26e-12!4;UBERON:0004340!1.26e-12!4;UBERON:0003124!2.52e-12!7;UBERON:0004923!2.78e-12!57;UBERON:0002185!3.37e-12!4;UBERON:0000305!3.86e-12!7;UBERON:0004871!1.25e-10!8;UBERON:0000485!3.65e-09!9;UBERON:0000065!2.45e-07!53;UBERON:0004119!4.27e-07!169;UBERON:0000925!4.27e-07!169;UBERON:0006595!4.27e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;3.32e-74;4!UBERON:0000478;1.20e-34;24!UBERON:0000305;7.84e-20;7!UBERON:0005631;3.25e-14;10!UBERON:0000158;3.25e-14;10!UBERON:0004815;2.59e-12;3!UBERON:0002031;2.59e-12;3!UBERON:0000077;8.94e-12;27!UBERON:0002185;6.55e-08;5!UBERON:0000474;3.57e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.32e-74,4;UBERON:0004340,3.32e-74,4;UBERON:0005631,7.71e-59,14;UBERON:0000158,7.71e-59,14;UBERON:0003124,6.96e-43,7;UBERON:0000478,1.20e-34,24;UBERON:0000305,7.84e-20,7;UBERON:0004871,1.71e-17,8;UBERON:0000995,6.53e-15,21;UBERON:0005795,2.85e-14,22;UBERON:0003975,2.85e-14,22;UBERON:0004923,5.70e-13,66;UBERON:0004175,1.18e-12,25;UBERON:0004815,2.59e-12,3;UBERON:0002031,2.59e-12,3;UBERON:0000077,5.14e-11,29;UBERON:0003134,8.61e-09,37;UBERON:0000474,8.61e-09,37;UBERON:0003100,5.32e-08,41;UBERON:0002185,6.55e-08,5;UBERON:0006554,4.59e-07,47;UBERON:0003133,6.25e-07,48;UBERON:0001008,6.25e-07,48 | |||
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|short_description=p@chr3:134044856..134044890,+ | |short_description=p@chr3:134044856..134044890,+ | ||
}} | }} |
Latest revision as of 16:04, 29 July 2015
Short description: | p@chr3:134044856..134044890, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:134044856..134044890, + |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.55e-98 | 3 |
extraembryonic cell | 1.44e-43 | 19 |
amnion mesenchymal stem cell | 2.72e-27 | 5 |
bronchial epithelial cell | 2.59e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
placenta | 3.32e-74 | 4 |
allantois | 3.32e-74 | 4 |
extraembryonic membrane | 7.71e-59 | 14 |
membranous layer | 7.71e-59 | 14 |
chorion | 6.96e-43 | 7 |
extraembryonic structure | 1.20e-34 | 24 |
amnion | 7.84e-20 | 7 |
somatic layer of lateral plate mesoderm | 1.71e-17 | 8 |
uterus | 6.53e-15 | 21 |
embryonic uterus | 2.85e-14 | 22 |
internal female genitalia | 2.85e-14 | 22 |
organ component layer | 5.70e-13 | 66 |
internal genitalia | 1.18e-12 | 25 |
lower respiratory tract epithelium | 2.59e-12 | 3 |
epithelium of bronchus | 2.59e-12 | 3 |
mixed endoderm/mesoderm-derived structure | 5.14e-11 | 29 |
female reproductive organ | 8.61e-09 | 37 |
female reproductive system | 8.61e-09 | 37 |
female organism | 5.32e-08 | 41 |
bronchus | 6.55e-08 | 5 |
urinary system structure | 4.59e-07 | 47 |
reproductive organ | 6.25e-07 | 48 |
renal system | 6.25e-07 | 48 |