FFCP PHASE1:Hg19::chr4:171011055..171011076,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51166 | |EntrezGene=51166 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17929 | |HGNC=17929 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N5Z0 | |UniProt=Q8N5Z0 | ||
|association_with_transcript=41bp_to_ENST00000337664_5end | |association_with_transcript=41bp_to_ENST00000337664_5end | ||
|cluster_id=chr4:171011055..171011076,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_6_at_AADAT_5end | |description=CAGE_peak_6_at_AADAT_5end | ||
|id=chr4:171011055..171011076,- | |id=chr4:171011055..171011076,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000228;1.78e-16;1!CL:0002372;1.78e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.21e-16,1;CL:0002372,1.21e-16,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!1.37e-15!34;UBERON:0002791!6.57e-15!33;UBERON:0001869!1.98e-14!32;UBERON:0002020!3.03e-14!34;UBERON:0003528!3.03e-14!34;UBERON:0003056!5.50e-14!61;UBERON:0005743!2.30e-13!86;UBERON:0000073!2.50e-13!94;UBERON:0001016!2.50e-13!94;UBERON:0002780!9.33e-13!41;UBERON:0001890!9.33e-13!41;UBERON:0006240!9.33e-13!41;UBERON:0003080!2.90e-12!42;UBERON:0000956!4.07e-12!25;UBERON:0000203!4.07e-12!25;UBERON:0002616!2.09e-11!59;UBERON:0000955!2.18e-11!69;UBERON:0006238!2.18e-11!69;UBERON:0002619!4.36e-11!22;UBERON:0001017!5.88e-11!82;UBERON:0001950!6.83e-11!20;UBERON:0003075!7.72e-11!86;UBERON:0007284!7.72e-11!86;UBERON:0000033!1.27e-10!123;UBERON:0001049!4.22e-10!57;UBERON:0005068!4.22e-10!57;UBERON:0006241!4.22e-10!57;UBERON:0007135!4.22e-10!57;UBERON:0002346!7.50e-10!90;UBERON:0000153!1.73e-09!129;UBERON:0007811!1.73e-09!129;UBERON:0000475!4.83e-09!365;UBERON:0004121!1.17e-07!169;UBERON:0000924!3.70e-07!173;UBERON:0006601!3.70e-07!173 | |ontology_enrichment_uberon=UBERON:0001893!1.37e-15!34;UBERON:0002791!6.57e-15!33;UBERON:0001869!1.98e-14!32;UBERON:0002020!3.03e-14!34;UBERON:0003528!3.03e-14!34;UBERON:0003056!5.50e-14!61;UBERON:0005743!2.30e-13!86;UBERON:0000073!2.50e-13!94;UBERON:0001016!2.50e-13!94;UBERON:0002780!9.33e-13!41;UBERON:0001890!9.33e-13!41;UBERON:0006240!9.33e-13!41;UBERON:0003080!2.90e-12!42;UBERON:0000956!4.07e-12!25;UBERON:0000203!4.07e-12!25;UBERON:0002616!2.09e-11!59;UBERON:0000955!2.18e-11!69;UBERON:0006238!2.18e-11!69;UBERON:0002619!4.36e-11!22;UBERON:0001017!5.88e-11!82;UBERON:0001950!6.83e-11!20;UBERON:0003075!7.72e-11!86;UBERON:0007284!7.72e-11!86;UBERON:0000033!1.27e-10!123;UBERON:0001049!4.22e-10!57;UBERON:0005068!4.22e-10!57;UBERON:0006241!4.22e-10!57;UBERON:0007135!4.22e-10!57;UBERON:0002346!7.50e-10!90;UBERON:0000153!1.73e-09!129;UBERON:0007811!1.73e-09!129;UBERON:0000475!4.83e-09!365;UBERON:0004121!1.17e-07!169;UBERON:0000924!3.70e-07!173;UBERON:0006601!3.70e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.61e-13;19!UBERON:0006925;2.61e-13;19!UBERON:0003688;4.60e-11;6!UBERON:0002358;4.60e-11;6!UBERON:0003684;4.60e-11;6!UBERON:0001178;4.60e-11;6!UBERON:0002423;3.47e-10;25!UBERON:0001876;6.67e-09;2!UBERON:0002365;3.37e-08;31!UBERON:0002330;3.37e-08;31!UBERON:0004457;1.13e-07;9!UBERON:0000042;1.13e-07;9!UBERON:0002368;5.86e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.45e-13,19;UBERON:0006925,2.45e-13,19;UBERON:0008836,2.45e-13,19;UBERON:0008835,1.47e-11,22;UBERON:0003894,1.47e-11,22;UBERON:0009854,4.54e-11,23;UBERON:0003688,6.24e-11,6;UBERON:0002358,6.24e-11,6;UBERON:0003684,6.24e-11,6;UBERON:0001178,6.24e-11,6;UBERON:0007499,3.31e-10,25;UBERON:0009497,3.31e-10,25;UBERON:0000015,3.31e-10,25;UBERON:0002423,3.31e-10,25;UBERON:0006235,3.31e-10,25;UBERON:0004161,3.31e-10,25;UBERON:0009856,7.99e-10,26;UBERON:0001876,5.08e-09,2;UBERON:0002417,6.06e-09,60;UBERON:0000916,6.06e-09,60;UBERON:0002365,2.80e-08,31;UBERON:0002330,2.80e-08,31;UBERON:0002368,2.34e-07,35 | |||
|phase1_expression=0.363356758541113,0,0,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.572471974262113,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.175669571386252,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0,0,0.423863802319124,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,0,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.310983165046111,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,10.1404027857465,0,5.90789906681404,0,0.368965315629341,0.857839051492628,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0.253991577168676,0,0,0,0.102827492703324,0,0.285826432630578,0.224262168690721,0,0.2933531432838,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,1.14861935834114,1.42636905040718,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02341449813341,0.160853921143607,0,0.462629081407967,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,10.0980191414768,0.183138929636687,0.330037999682352,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0,0,0,9.41438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,1.9882952955326,0.281338832821026,0.111308705022906,0,0.211125408127993,0,0.276283915531148,0,0.306806047506464,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0.520855522170466,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0.247127877893006,0.104421949505455,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0,0,0,0,0,0.0821154570532092,0,0.0882561266915003,0.225980740780532,0,0,0.379864775735272,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0.393915911536118,0.494495150286999,0.404421263125109,0.196854963029498,0,0,0.408610218334727,0,0,0.415440338029185,0,0,0.364497339948148,0,0.472834243795189,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,4.54311924402056,1.32506888912221,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0,0,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0,0.295710299979268,0.159296767163702,0,0,0.829412415681711,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0.970423302570136,0.314531883711793,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0.321146125482298,0,0.319267718114302,0.205116364240755,0.756215088665154,0.345786262321089,0.322951291263702,0,0.294443155503077,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.443910671357348,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.328863867814245,0,0,0.235479278551542,0.157115589916002,0,0,0.215927591218621,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0.22589216407792,0,0.603851374266694,0,0,0,0,0.235676547101626,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0.160482733378337,0,0,0.143339583151451,0,0.203974470572744,0.872701380680755,0,0,0,0,0,0.546327859818478,0.380095503034311,0.101988829741982,0,0.459474497674225,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,0,0,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.572471974262113,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.175669571386252,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0,0,0.423863802319124,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,0,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.310983165046111,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,10.1404027857465,0,5.90789906681404,0,0.368965315629341,0.857839051492628,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0.253991577168676,0,0,0,0.102827492703324,0,0.285826432630578,0.224262168690721,0,0.2933531432838,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,1.14861935834114,1.42636905040718,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02341449813341,0.160853921143607,0,0.462629081407967,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,10.0980191414768,0.183138929636687,0.330037999682352,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0,0,0,9.41438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,1.9882952955326,0.281338832821026,0.111308705022906,0,0.211125408127993,0,0.276283915531148,0,0.306806047506464,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0.520855522170466,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0.247127877893006,0.104421949505455,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0,0,0,0,0,0.0821154570532092,0,0.0882561266915003,0.225980740780532,0,0,0.379864775735272,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0.393915911536118,0.494495150286999,0.404421263125109,0.196854963029498,0,0,0.408610218334727,0,0,0.415440338029185,0,0,0.364497339948148,0,0.472834243795189,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,4.54311924402056,1.32506888912221,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0,0,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0,0.295710299979268,0.159296767163702,0,0,0.829412415681711,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0.970423302570136,0.314531883711793,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0.321146125482298,0,0.319267718114302,0.205116364240755,0.756215088665154,0.345786262321089,0.322951291263702,0,0.294443155503077,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.443910671357348,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.328863867814245,0,0,0.235479278551542,0.157115589916002,0,0,0.215927591218621,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0.22589216407792,0,0.603851374266694,0,0,0,0,0.235676547101626,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0.160482733378337,0,0,0.143339583151451,0,0.203974470572744,0.872701380680755,0,0,0,0,0,0.546327859818478,0.380095503034311,0.101988829741982,0,0.459474497674225,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@AADAT | |short_description=p6@AADAT | ||
}} | }} |
Latest revision as of 18:12, 16 September 2015
Short description: | p6@AADAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AADAT_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 41bp_to_ENST00000337664_5end |
EntrezGene: | AADAT |
HGNC: | 17929 |
UniProt: | Q8N5Z0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.21e-16 | 1 |
myotube | 1.21e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 2.45e-13 | 19 |
digestive gland | 2.45e-13 | 19 |
liver bud | 2.45e-13 | 19 |
hepatic diverticulum | 1.47e-11 | 22 |
liver primordium | 1.47e-11 | 22 |
digestive tract diverticulum | 4.54e-11 | 23 |
omentum | 6.24e-11 | 6 |
peritoneum | 6.24e-11 | 6 |
abdominal cavity | 6.24e-11 | 6 |
visceral peritoneum | 6.24e-11 | 6 |
epithelial sac | 3.31e-10 | 25 |
epithelium of foregut-midgut junction | 3.31e-10 | 25 |
anatomical boundary | 3.31e-10 | 25 |
hepatobiliary system | 3.31e-10 | 25 |
foregut-midgut junction | 3.31e-10 | 25 |
septum transversum | 3.31e-10 | 25 |
sac | 7.99e-10 | 26 |
amygdala | 5.08e-09 | 2 |
abdominal segment of trunk | 6.06e-09 | 60 |
abdomen | 6.06e-09 | 60 |
exocrine gland | 2.80e-08 | 31 |
exocrine system | 2.80e-08 | 31 |
endocrine gland | 2.34e-07 | 35 |