FFCP PHASE1:Hg19::chr19:35719568..35719596,-: Difference between revisions
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|id=chr19:35719568..35719596,-
|short_description=p1@FAM187B
|description=CAGE_peak_1_at_FAM187B_5end
|association_with_transcript=31bp_to_NM_152481,uc002nyk.1_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=148109 | |EntrezGene=148109 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26366 | |HGNC=26366 | ||
|TSSclassifier=strong | |||
|UniProt=Q17R55 | |UniProt=Q17R55 | ||
|association_with_transcript=31bp_to_NM_152481,uc002nyk.1_5end | |||
|cluster_id=chr19:35719568..35719596,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_FAM187B_5end | |||
|id=chr19:35719568..35719596,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!4.40e-34!41;UBERON:0001890!4.40e-34!41;UBERON:0006240!4.40e-34!41;UBERON:0003080!2.91e-33!42;UBERON:0001893!2.04e-27!34;UBERON:0001897!6.76e-26!2;UBERON:0002619!1.25e-25!22;UBERON:0001049!2.39e-24!57;UBERON:0005068!2.39e-24!57;UBERON:0006241!2.39e-24!57;UBERON:0007135!2.39e-24!57;UBERON:0000955!1.62e-23!69;UBERON:0006238!1.62e-23!69;UBERON:0002616!1.70e-23!59;UBERON:0001869!4.56e-23!32;UBERON:0003056!1.07e-22!61;UBERON:0000956!1.28e-22!25;UBERON:0000203!1.28e-22!25;UBERON:0007023!1.45e-22!115;UBERON:0002791!2.49e-22!33;UBERON:0001950!1.05e-20!20;UBERON:0001017!1.16e-19!82;UBERON:0005743!1.06e-18!86;UBERON:0000073!7.83e-17!94;UBERON:0001016!7.83e-17!94;UBERON:0002020!1.12e-16!34;UBERON:0003528!1.12e-16!34;UBERON:0003075!8.38e-16!86;UBERON:0007284!8.38e-16!86;UBERON:0002346!4.75e-15!90;UBERON:0001301!5.85e-14!1;UBERON:0002902!6.65e-14!1;UBERON:0009899!6.65e-14!1;UBERON:0007190!9.73e-14!1;UBERON:0002022!1.10e-13!1;UBERON:0002336!1.42e-13!1;UBERON:0001018!1.42e-13!1;UBERON:0002473!1.42e-13!1;UBERON:0005340!1.42e-13!1;UBERON:0002316!1.42e-13!1;UBERON:0003544!1.42e-13!1;UBERON:0001020!1.42e-13!1;UBERON:0005970!1.42e-13!1;UBERON:0002437!1.42e-13!1;UBERON:0002581!1.61e-13!1;UBERON:0000033!9.95e-13!123;UBERON:0000153!4.47e-12!129;UBERON:0007811!4.47e-12!129;UBERON:0003135!4.81e-11!11;UBERON:0001872!1.12e-10!5;UBERON:0000200!3.86e-09!6;UBERON:0004121!7.98e-09!169;UBERON:0000924!1.38e-08!173;UBERON:0006601!1.38e-08!173;UBERON:0001894!4.42e-08!7;UBERON:0006222!4.42e-08!7;UBERON:0001954!1.20e-07!2;UBERON:0003022!1.20e-07!2;UBERON:0002421!1.20e-07!2;UBERON:0002600!1.20e-07!2;UBERON:0000025!1.33e-07!194;UBERON:0005162!1.99e-07!2;UBERON:0000122!1.99e-07!2;UBERON:0000473!2.37e-07!8;UBERON:0001870!2.40e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p1@FAM187B | |||
}} | }} |
Latest revision as of 10:44, 17 September 2015
Short description: | p1@FAM187B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM187B_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 31bp_to_NM_152481, uc002nyk.1_5end |
EntrezGene: | FAM187B |
HGNC: | 26366 |
UniProt: | Q17R55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |