FFCP PHASE1:Hg19::chr4:3386868..3386907,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6002 | |EntrezGene=6002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9994 | |HGNC=9994 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000508158,uc010icu.1_5end | |association_with_transcript=0bp_to_ENST00000508158,uc010icu.1_5end | ||
|cluster_id=chr4:3386868..3386907,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_8_at_RGS12_5end | |description=CAGE_peak_8_at_RGS12_5end | ||
|id=chr4:3386868..3386907,+ | |id=chr4:3386868..3386907,+ | ||
|ontology_enrichment_celltype=CL:0000223!5.61e-13!59;CL:0000066!1.16e-10!254;CL:0000557!6.09e-10!71;CL:0000839!2.25e-09!70;CL:0000766!9.79e-09!76;CL:0002274!4.62e-08!5;CL:0000457!4.62e-08!5;CL:0002191!4.62e-08!5;CL:0000097!4.62e-08!5;CL:0000831!4.62e-08!5;CL:0002028!4.62e-08!5;CL:0002076!1.84e-07!43;CL:0000148!2.51e-07!10;CL:0000541!2.51e-07!10;CL:0002009!5.95e-07!65 | |ontology_enrichment_celltype=CL:0000223!5.61e-13!59;CL:0000066!1.16e-10!254;CL:0000557!6.09e-10!71;CL:0000839!2.25e-09!70;CL:0000766!9.79e-09!76;CL:0002274!4.62e-08!5;CL:0000457!4.62e-08!5;CL:0002191!4.62e-08!5;CL:0000097!4.62e-08!5;CL:0000831!4.62e-08!5;CL:0002028!4.62e-08!5;CL:0002076!1.84e-07!43;CL:0000148!2.51e-07!10;CL:0000541!2.51e-07!10;CL:0002009!5.95e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.52e-24;12!CL:0002567;1.76e-18;3!CL:0000148;1.78e-14;10!CL:0000147;2.77e-10;14!CL:0000710;3.96e-07;20!CL:0002327;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.19e-24,12;CL:0002567,1.98e-18,3;CL:0000148,2.00e-14,10;CL:0000541,2.00e-14,10;CL:0000223,2.09e-10,58;CL:0000147,3.00e-10,14;CL:0000066,1.59e-08,253;CL:0000710,4.19e-07,20;CL:0002327,9.11e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.20e-14;31!UBERON:0004161;6.98e-14;11!UBERON:0009497;1.04e-11;13!UBERON:0003918;6.84e-10;10!UBERON:0007687;6.84e-10;10!UBERON:0006242;2.44e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.37e-11!115;UBERON:0002365!1.53e-08!31;UBERON:0002330!1.53e-08!31;UBERON:0002371!5.86e-08!80;UBERON:0001474!1.43e-07!86;UBERON:0004119!1.70e-07!169;UBERON:0000925!1.70e-07!169;UBERON:0006595!1.70e-07!169 | |ontology_enrichment_uberon=UBERON:0002405!1.37e-11!115;UBERON:0002365!1.53e-08!31;UBERON:0002330!1.53e-08!31;UBERON:0002371!5.86e-08!80;UBERON:0001474!1.43e-07!86;UBERON:0004119!1.70e-07!169;UBERON:0000925!1.70e-07!169;UBERON:0006595!1.70e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.22e-19;19!UBERON:0006925;1.22e-19;19!UBERON:0002423;1.89e-18;25!UBERON:0002365;1.73e-17;31!UBERON:0002330;1.73e-17;31!UBERON:0002417;2.80e-11;58!UBERON:0000916;2.80e-11;58!UBERON:0005172;3.25e-11;52!UBERON:0005173;3.25e-11;52!UBERON:0002368;1.28e-09;33!UBERON:0000949;5.99e-09;43!UBERON:0001911;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.12e-19,19;UBERON:0006925,1.12e-19,19;UBERON:0008836,1.12e-19,19;UBERON:0005172,3.35e-19,54;UBERON:0005173,3.35e-19,54;UBERON:0009497,1.60e-18,25;UBERON:0000015,1.60e-18,25;UBERON:0002423,1.60e-18,25;UBERON:0006235,1.60e-18,25;UBERON:0004161,1.60e-18,25;UBERON:0002365,6.34e-18,31;UBERON:0002330,6.34e-18,31;UBERON:0002417,5.45e-17,60;UBERON:0000916,5.45e-17,60;UBERON:0008835,7.90e-17,22;UBERON:0003894,7.90e-17,22;UBERON:0009854,4.82e-16,23;UBERON:0007499,1.16e-14,25;UBERON:0009856,4.74e-14,26;UBERON:0005177,2.19e-10,101;UBERON:0002368,4.03e-10,35;UBERON:0000949,1.46e-09,45;UBERON:0002530,1.45e-08,59;UBERON:0009569,8.77e-08,112;UBERON:0003929,9.29e-08,54;UBERON:0001911,9.11e-07,4;UBERON:0005333,9.11e-07,4;UBERON:0008425,9.11e-07,4;UBERON:0005311,9.11e-07,4 | |||
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| ||
|short_description=p8@RGS12 | |short_description=p8@RGS12 | ||
}} | }} |
Latest revision as of 14:07, 17 September 2015
Short description: | p8@RGS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RGS12_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000508158, uc010icu.1_5end |
EntrezGene: | RGS12 |
HGNC: | 9994 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.19e-24 | 12 |
light melanocyte | 1.98e-18 | 3 |
melanocyte | 2.00e-14 | 10 |
melanoblast | 2.00e-14 | 10 |
endodermal cell | 2.09e-10 | 58 |
pigment cell | 3.00e-10 | 14 |
epithelial cell | 1.59e-08 | 253 |
neurecto-epithelial cell | 4.19e-07 | 20 |
mammary gland epithelial cell | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 1.12e-19 | 19 |
digestive gland | 1.12e-19 | 19 |
liver bud | 1.12e-19 | 19 |
abdomen element | 3.35e-19 | 54 |
abdominal segment element | 3.35e-19 | 54 |
epithelium of foregut-midgut junction | 1.60e-18 | 25 |
anatomical boundary | 1.60e-18 | 25 |
hepatobiliary system | 1.60e-18 | 25 |
foregut-midgut junction | 1.60e-18 | 25 |
septum transversum | 1.60e-18 | 25 |
exocrine gland | 6.34e-18 | 31 |
exocrine system | 6.34e-18 | 31 |
abdominal segment of trunk | 5.45e-17 | 60 |
abdomen | 5.45e-17 | 60 |
hepatic diverticulum | 7.90e-17 | 22 |
liver primordium | 7.90e-17 | 22 |
digestive tract diverticulum | 4.82e-16 | 23 |
epithelial sac | 1.16e-14 | 25 |
sac | 4.74e-14 | 26 |
trunk region element | 2.19e-10 | 101 |
endocrine gland | 4.03e-10 | 35 |
endocrine system | 1.46e-09 | 45 |
gland | 1.45e-08 | 59 |
subdivision of trunk | 8.77e-08 | 112 |
gut epithelium | 9.29e-08 | 54 |
mammary gland | 9.11e-07 | 4 |
mammary bud | 9.11e-07 | 4 |
mammary ridge | 9.11e-07 | 4 |
mammary placode | 9.11e-07 | 4 |