FFCP PHASE1:Hg19::chr4:48545952..48545965,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:48545952..48545965,- | |||
|coexpression_cluster_id=C361 | |coexpression_cluster_id=C361 | ||
|description=CAGE_peak_at_chr4:48545952..48545965,- | |description=CAGE_peak_at_chr4:48545952..48545965,- | ||
|id=chr4:48545952..48545965,- | |id=chr4:48545952..48545965,- | ||
|ontology_enrichment_celltype=CL:0000047!3.10e-12!8;CL:0002605!9.43e-09!3;CL:0000039!4.82e-08!7;CL:0000586!4.82e-08!7;CL:0002319!2.30e-07!25 | |ontology_enrichment_celltype=CL:0000047!3.10e-12!8;CL:0002605!9.43e-09!3;CL:0000039!4.82e-08!7;CL:0000586!4.82e-08!7;CL:0002319!2.30e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000047;3.29e-195;2!CL:0002319;6.71e-16;25!CL:0000048;3.52e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.99e-50,8;CL:0002319,6.71e-16,25;CL:0000133,9.44e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000133;3.42e-07;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002308!3.20e-15!9;UBERON:0000125!3.20e-15!9;UBERON:0002148!4.64e-12!2;UBERON:0009662!4.64e-12!2;UBERON:0001017!7.39e-12!82;UBERON:0000473!1.37e-11!8;UBERON:0002020!2.46e-11!34;UBERON:0003528!2.46e-11!34;UBERON:0005743!3.54e-11!86;UBERON:0000073!7.43e-10!94;UBERON:0001016!7.43e-10!94;UBERON:0001869!1.61e-09!32;UBERON:0000991!3.06e-09!21;UBERON:0009196!3.06e-09!21;UBERON:0009117!3.06e-09!21;UBERON:0005564!3.06e-09!21;UBERON:0001893!6.56e-09!34;UBERON:0004176!8.56e-09!22;UBERON:0003135!1.87e-08!11;UBERON:0000988!2.51e-08!3;UBERON:0006331!2.51e-08!3;UBERON:0005383!2.60e-08!3;UBERON:0005382!2.60e-08!3;UBERON:0001049!9.97e-08!57;UBERON:0005068!9.97e-08!57;UBERON:0006241!9.97e-08!57;UBERON:0007135!9.97e-08!57;UBERON:0009663!1.15e-07!7;UBERON:0002616!2.06e-07!59;UBERON:0000955!2.65e-07!69;UBERON:0006238!2.65e-07!69;UBERON:0001736!2.82e-07!1;UBERON:0006298!2.82e-07!1;UBERON:0002780!3.12e-07!41;UBERON:0001890!3.12e-07!41;UBERON:0006240!3.12e-07!41;UBERON:0002791!3.82e-07!33;UBERON:0003056!3.95e-07!61;UBERON:0003080!4.89e-07!42;UBERON:0001874!5.69e-07!1;UBERON:0003075!8.44e-07!86;UBERON:0007284!8.44e-07!86;UBERON:0006834!8.98e-07!1;UBERON:0004121!9.53e-07!169 | |ontology_enrichment_uberon=UBERON:0002308!3.20e-15!9;UBERON:0000125!3.20e-15!9;UBERON:0002148!4.64e-12!2;UBERON:0009662!4.64e-12!2;UBERON:0001017!7.39e-12!82;UBERON:0000473!1.37e-11!8;UBERON:0002020!2.46e-11!34;UBERON:0003528!2.46e-11!34;UBERON:0005743!3.54e-11!86;UBERON:0000073!7.43e-10!94;UBERON:0001016!7.43e-10!94;UBERON:0001869!1.61e-09!32;UBERON:0000991!3.06e-09!21;UBERON:0009196!3.06e-09!21;UBERON:0009117!3.06e-09!21;UBERON:0005564!3.06e-09!21;UBERON:0001893!6.56e-09!34;UBERON:0004176!8.56e-09!22;UBERON:0003135!1.87e-08!11;UBERON:0000988!2.51e-08!3;UBERON:0006331!2.51e-08!3;UBERON:0005383!2.60e-08!3;UBERON:0005382!2.60e-08!3;UBERON:0001049!9.97e-08!57;UBERON:0005068!9.97e-08!57;UBERON:0006241!9.97e-08!57;UBERON:0007135!9.97e-08!57;UBERON:0009663!1.15e-07!7;UBERON:0002616!2.06e-07!59;UBERON:0000955!2.65e-07!69;UBERON:0006238!2.65e-07!69;UBERON:0001736!2.82e-07!1;UBERON:0006298!2.82e-07!1;UBERON:0002780!3.12e-07!41;UBERON:0001890!3.12e-07!41;UBERON:0006240!3.12e-07!41;UBERON:0002791!3.82e-07!33;UBERON:0003056!3.95e-07!61;UBERON:0003080!4.89e-07!42;UBERON:0001874!5.69e-07!1;UBERON:0003075!8.44e-07!86;UBERON:0007284!8.44e-07!86;UBERON:0006834!8.98e-07!1;UBERON:0004121!9.53e-07!169 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr4:48545952..48545965,- | |short_description=p@chr4:48545952..48545965,- | ||
}} | }} |
Latest revision as of 05:31, 30 July 2015
Short description: | p@chr4:48545952..48545965, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:48545952..48545965, - |
Coexpression cluster: | C361_Neural_Astrocyte_Neurons_spinal_Chondrocyte_Fibroblast_sacrococcigeal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.99e-50 | 8 |
neural cell | 6.71e-16 | 25 |
neurectodermal cell | 9.44e-08 | 59 |