FFCP PHASE1:Hg19::chr5:164891824..164891866,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:164891824..164891866,- | |||
|coexpression_cluster_id=C133 | |coexpression_cluster_id=C133 | ||
|description=CAGE_peak_at_chr5:164891824..164891866,- | |description=CAGE_peak_at_chr5:164891824..164891866,- | ||
|id=chr5:164891824..164891866,- | |id=chr5:164891824..164891866,- | ||
|ontology_enrichment_celltype=CL:0001014!7.03e-19!2;CL:0001016!7.03e-19!2;CL:0000453!4.30e-08!5;CL:0000840!7.05e-07!5;CL:0001029!7.05e-07!5 | |ontology_enrichment_celltype=CL:0001014!7.03e-19!2;CL:0001016!7.03e-19!2;CL:0000453!4.30e-08!5;CL:0000840!7.05e-07!5;CL:0001029!7.05e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.65e-12;2!CL:0001016;1.65e-12;2!CL:0002178;1.21e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.65e-12,2;CL:0001016,1.65e-12,2;CL:0002178,1.12e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.42e-10!14;DOID:3151!3.40e-10!1;DOID:3149!3.40e-10!1 | |ontology_enrichment_disease=DOID:1749!2.42e-10!14;DOID:3151!3.40e-10!1;DOID:3149!3.40e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:3151;3.28e-23;1!DOID:3149;3.28e-23;1!DOID:1749;8.86e-15;14!DOID:3493;1.48e-12;2!DOID:3451;2.59e-12;2!DOID:4159;2.59e-12;2!DOID:0060122;2.59e-12;2!DOID:299;1.27e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,6.40e-23,1;DOID:3149,6.40e-23,1;DOID:1749,7.00e-15,14;DOID:3493,1.48e-12,2;DOID:3451,3.62e-12,2;DOID:4159,3.62e-12,2;DOID:0060122,3.62e-12,2;DOID:299,1.30e-08,25;DOID:305,1.73e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002110!3.37e-12!3;UBERON:0006242!3.37e-12!3;UBERON:0000997!2.59e-10!1;UBERON:0005056!2.59e-10!1 | |ontology_enrichment_uberon=UBERON:0002110!3.37e-12!3;UBERON:0006242!3.37e-12!3;UBERON:0000997!2.59e-10!1;UBERON:0005056!2.59e-10!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;3.28e-23;1!UBERON:0005056;3.28e-23;1!UBERON:0004176;3.28e-23;1!UBERON:0003127;2.59e-12;2!UBERON:0000014;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,3.28e-23,1;UBERON:0005056,3.28e-23,1;UBERON:0003127,2.90e-12,2 | |||
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|short_description=p@chr5:164891824..164891866,- | |short_description=p@chr5:164891824..164891866,- | ||
}} | }} |
Latest revision as of 12:39, 30 July 2015
Short description: | p@chr5:164891824..164891866, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:164891824..164891866, - |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.65e-12 | 2 |
immature CD1a-positive Langerhans cell | 1.65e-12 | 2 |
epithelial cell of stomach | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 3.28e-23 | 1 |
external female genitalia | 3.28e-23 | 1 |
open tracheal system trachea | 2.90e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 6.40e-23 | 1 |
keratoacanthoma | 6.40e-23 | 1 |
squamous cell carcinoma | 7.00e-15 | 14 |
signet ring cell adenocarcinoma | 1.48e-12 | 2 |
skin carcinoma | 3.62e-12 | 2 |
skin cancer | 3.62e-12 | 2 |
integumentary system cancer | 3.62e-12 | 2 |
adenocarcinoma | 1.30e-08 | 25 |
carcinoma | 1.73e-07 | 106 |