FFCP PHASE1:Hg19::chr5:170210042..170210086,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:170210042..170210086,- | |||
|coexpression_cluster_id=C393 | |coexpression_cluster_id=C393 | ||
|description=CAGE_peak_at_chr5:170210042..170210086,- | |description=CAGE_peak_at_chr5:170210042..170210086,- | ||
|id=chr5:170210042..170210086,- | |id=chr5:170210042..170210086,- | ||
|ontology_enrichment_celltype=CL:0002536!1.13e-23!2;CL:0002322!2.43e-20!5;CL:0000349!3.98e-16!3;CL:0002577!3.98e-16!3;CL:0000148!1.78e-10!10;CL:0000541!1.78e-10!10;CL:0000147!1.25e-07!14;CL:0000039!4.71e-07!7;CL:0000586!4.71e-07!7 | |ontology_enrichment_celltype=CL:0002536!1.13e-23!2;CL:0002322!2.43e-20!5;CL:0000349!3.98e-16!3;CL:0002577!3.98e-16!3;CL:0000148!1.78e-10!10;CL:0000541!1.78e-10!10;CL:0000147!1.25e-07!14;CL:0000039!4.71e-07!7;CL:0000586!4.71e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002536;5.96e-34;2!CL:0000349;4.52e-32;19!CL:0002577;3.66e-23;3!CL:0002537;1.40e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,5.04e-34,2;CL:0000349,4.52e-32,19;CL:0002577,4.09e-23,3;CL:0002537,1.40e-14,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4468!7.20e-07!2 | |ontology_enrichment_disease=DOID:4468!7.20e-07!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.00e-20!14;UBERON:0000158!3.00e-20!14;UBERON:0000305!2.84e-15!7;UBERON:0004871!1.94e-13!8;UBERON:0001154!1.96e-12!1;UBERON:0001153!1.96e-12!1;UBERON:0001987!2.47e-12!4;UBERON:0004340!2.47e-12!4;UBERON:0001301!3.08e-12!1;UBERON:0000478!8.65e-12!24;UBERON:0003124!2.02e-07!7;UBERON:0004175!2.48e-07!25 | |ontology_enrichment_uberon=UBERON:0005631!3.00e-20!14;UBERON:0000158!3.00e-20!14;UBERON:0000305!2.84e-15!7;UBERON:0004871!1.94e-13!8;UBERON:0001154!1.96e-12!1;UBERON:0001153!1.96e-12!1;UBERON:0001987!2.47e-12!4;UBERON:0004340!2.47e-12!4;UBERON:0001301!3.08e-12!1;UBERON:0000478!8.65e-12!24;UBERON:0003124!2.02e-07!7;UBERON:0004175!2.48e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.64e-38;7!UBERON:0005631;2.22e-27;10!UBERON:0000158;2.22e-27;10!UBERON:0000478;1.16e-25;24!UBERON:0001987;9.45e-18;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.85e-43,14;UBERON:0000158,4.85e-43,14;UBERON:0000305,1.49e-38,7;UBERON:0004871,6.50e-34,8;UBERON:0000478,1.16e-25,24;UBERON:0001987,1.03e-17,4;UBERON:0004340,1.03e-17,4;UBERON:0003124,9.89e-11,7;UBERON:0004923,4.66e-10,66 | |||
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|short_description=p@chr5:170210042..170210086,- | |short_description=p@chr5:170210042..170210086,- | ||
}} | }} |
Latest revision as of 12:59, 30 July 2015
Short description: | p@chr5:170210042..170210086, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:170210042..170210086, - |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 5.04e-34 | 2 |
extraembryonic cell | 4.52e-32 | 19 |
placental epithelial cell | 4.09e-23 | 3 |
amnion mesenchymal stem cell | 1.40e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.85e-43 | 14 |
membranous layer | 4.85e-43 | 14 |
amnion | 1.49e-38 | 7 |
somatic layer of lateral plate mesoderm | 6.50e-34 | 8 |
extraembryonic structure | 1.16e-25 | 24 |
placenta | 1.03e-17 | 4 |
allantois | 1.03e-17 | 4 |
chorion | 9.89e-11 | 7 |
organ component layer | 4.66e-10 | 66 |