FFCP PHASE1:Hg19::chr5:54157..54174,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:54157..54174,+ | |||
|coexpression_cluster_id=C94 | |coexpression_cluster_id=C94 | ||
|description=CAGE_peak_at_chr5:54157..54174,+ | |description=CAGE_peak_at_chr5:54157..54174,+ | ||
|id=chr5:54157..54174,+ | |id=chr5:54157..54174,+ | ||
|ontology_enrichment_celltype=CL:0000039!7.11e-08!7;CL:0000586!7.11e-08!7 | |ontology_enrichment_celltype=CL:0000039!7.11e-08!7;CL:0000586!7.11e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.02e-15;7!CL:0000586;2.02e-15;7!CL:0000313;2.27e-08;1!CL:0002553;2.80e-08;1!CL:0000167;5.22e-08;1!CL:0000164;5.22e-08;1!CL:0000502;5.22e-08;1!CL:0000172;5.22e-08;1!CL:0000173;5.22e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.55e-15,7;CL:0000586,1.55e-15,7;CL:0000313,2.35e-08,1;CL:0002553,3.11e-08,1;CL:0000167,4.40e-08,1;CL:0000164,4.40e-08,1;CL:0000502,4.40e-08,1;CL:0000172,4.40e-08,1;CL:0000173,4.40e-08,1;CL:0002351,4.40e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002351;5.22e-08;1 | |||
|ontology_enrichment_disease=DOID:0050687!5.30e-12!143;DOID:305!5.43e-11!106;DOID:3095!7.08e-07!22;DOID:2994!7.08e-07!22 | |ontology_enrichment_disease=DOID:0050687!5.30e-12!143;DOID:305!5.43e-11!106;DOID:3095!7.08e-07!22;DOID:2994!7.08e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:2152;2.27e-08;1!DOID:0050619;3.70e-08;1!DOID:1357;3.70e-08;1!DOID:4430;5.22e-08;1!DOID:5093;1.30e-07;4!DOID:1612;1.30e-07;4!DOID:3095;2.18e-07;22!DOID:2994;2.18e-07;22!DOID:0050615;3.87e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.35e-08,1;DOID:0050619,3.34e-08,1;DOID:1357,3.34e-08,1;DOID:4430,4.40e-08,1;DOID:0050687,1.01e-07,143;DOID:5093,1.30e-07,4;DOID:1612,1.30e-07,4;DOID:3095,1.90e-07,22;DOID:2994,1.90e-07,22;DOID:0050615,3.87e-07,16;DOID:305,4.91e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.37e-17!86;UBERON:0001017!1.58e-16!82;UBERON:0000073!2.14e-15!94;UBERON:0001016!2.14e-15!94;UBERON:0001049!1.46e-13!57;UBERON:0005068!1.46e-13!57;UBERON:0006241!1.46e-13!57;UBERON:0007135!1.46e-13!57;UBERON:0003075!2.05e-13!86;UBERON:0007284!2.05e-13!86;UBERON:0002346!3.59e-13!90;UBERON:0000955!7.17e-13!69;UBERON:0006238!7.17e-13!69;UBERON:0002616!1.20e-12!59;UBERON:0000153!1.53e-10!129;UBERON:0007811!1.53e-10!129;UBERON:0004121!1.04e-09!169;UBERON:0000924!1.04e-09!173;UBERON:0006601!1.04e-09!173;UBERON:0000033!1.19e-09!123;UBERON:0002780!2.95e-09!41;UBERON:0001890!2.95e-09!41;UBERON:0006240!2.95e-09!41;UBERON:0003056!5.45e-09!61;UBERON:0003080!6.58e-09!42;UBERON:0000473!4.40e-08!8;UBERON:0000956!6.84e-07!25;UBERON:0000203!6.84e-07!25;UBERON:0007023!8.74e-07!115 | |ontology_enrichment_uberon=UBERON:0005743!2.37e-17!86;UBERON:0001017!1.58e-16!82;UBERON:0000073!2.14e-15!94;UBERON:0001016!2.14e-15!94;UBERON:0001049!1.46e-13!57;UBERON:0005068!1.46e-13!57;UBERON:0006241!1.46e-13!57;UBERON:0007135!1.46e-13!57;UBERON:0003075!2.05e-13!86;UBERON:0007284!2.05e-13!86;UBERON:0002346!3.59e-13!90;UBERON:0000955!7.17e-13!69;UBERON:0006238!7.17e-13!69;UBERON:0002616!1.20e-12!59;UBERON:0000153!1.53e-10!129;UBERON:0007811!1.53e-10!129;UBERON:0004121!1.04e-09!169;UBERON:0000924!1.04e-09!173;UBERON:0006601!1.04e-09!173;UBERON:0000033!1.19e-09!123;UBERON:0002780!2.95e-09!41;UBERON:0001890!2.95e-09!41;UBERON:0006240!2.95e-09!41;UBERON:0003056!5.45e-09!61;UBERON:0003080!6.58e-09!42;UBERON:0000473!4.40e-08!8;UBERON:0000956!6.84e-07!25;UBERON:0000203!6.84e-07!25;UBERON:0007023!8.74e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;7.92e-15;2!UBERON:0001896;7.51e-10;3!UBERON:0005290;7.51e-10;3!UBERON:0004911;2.27e-08;1!UBERON:0001764;3.70e-08;1!UBERON:0001825;3.70e-08;1!UBERON:0003296;7.61e-08;4!UBERON:0010133;7.61e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,7.93e-15,2;UBERON:0001896,7.51e-10,3;UBERON:0005290,7.51e-10,3;UBERON:0010096,7.51e-10,3;UBERON:0004911,2.35e-08,1;UBERON:0001764,3.34e-08,1;UBERON:0001825,3.34e-08,1;UBERON:0003296,7.61e-08,4;UBERON:0010133,7.61e-08,4 | |||
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| ||
|short_description=p@chr5:54157..54174,+ | |short_description=p@chr5:54157..54174,+ | ||
}} | }} |
Latest revision as of 15:15, 30 July 2015
Short description: | p@chr5:54157..54174, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:54157..54174, + |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.55e-15 | 7 |
germ cell | 1.55e-15 | 7 |
serous secreting cell | 2.35e-08 | 1 |
lung fibroblast | 3.11e-08 | 1 |
peptide hormone secreting cell | 4.40e-08 | 1 |
enteroendocrine cell | 4.40e-08 | 1 |
type D enteroendocrine cell | 4.40e-08 | 1 |
somatostatin secreting cell | 4.40e-08 | 1 |
pancreatic D cell | 4.40e-08 | 1 |
progenitor cell of endocrine pancreas | 4.40e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 7.93e-15 | 2 |
medulla oblongata | 7.51e-10 | 3 |
myelencephalon | 7.51e-10 | 3 |
future myelencephalon | 7.51e-10 | 3 |
epithelium of female gonad | 2.35e-08 | 1 |
maxillary sinus | 3.34e-08 | 1 |
paranasal sinus | 3.34e-08 | 1 |
gland of diencephalon | 7.61e-08 | 4 |
neuroendocrine gland | 7.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.35e-08 | 1 |
paranasal sinus cancer | 3.34e-08 | 1 |
maxillary sinus cancer | 3.34e-08 | 1 |
somatostatinoma | 4.40e-08 | 1 |
cell type cancer | 1.01e-07 | 143 |
thoracic cancer | 1.30e-07 | 4 |
breast cancer | 1.30e-07 | 4 |
germ cell and embryonal cancer | 1.90e-07 | 22 |
germ cell cancer | 1.90e-07 | 22 |
respiratory system cancer | 3.87e-07 | 16 |
carcinoma | 4.91e-07 | 106 |