FFCP PHASE1:Hg19::chr6:125367597..125367609,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=154214 | |EntrezGene=154214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21487 | |HGNC=21487 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TC41 | |UniProt=Q8TC41 | ||
|association_with_transcript=-136bp_to_ENST00000368415_5end | |association_with_transcript=-136bp_to_ENST00000368415_5end | ||
|cluster_id=chr6:125367597..125367609,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_17_at_RNF217_5end | |description=CAGE_peak_17_at_RNF217_5end | ||
|id=chr6:125367597..125367609,+ | |id=chr6:125367597..125367609,+ | ||
|ontology_enrichment_celltype=CL:0000244!1.09e-15!4;CL:0000731!1.09e-15!4;CL:0002251!1.19e-14!21;CL:0002076!1.48e-14!43;CL:0002541!9.86e-13!3;CL:0002621!1.70e-11!3;CL:0000223!3.66e-11!59;CL:0000066!5.43e-11!254;CL:0002537!1.06e-07!5;CL:0002159!5.94e-07!13;CL:0000622!6.78e-07!5 | |ontology_enrichment_celltype=CL:0000244!1.09e-15!4;CL:0000731!1.09e-15!4;CL:0002251!1.19e-14!21;CL:0002076!1.48e-14!43;CL:0002541!9.86e-13!3;CL:0002621!1.70e-11!3;CL:0000223!3.66e-11!59;CL:0000066!5.43e-11!254;CL:0002537!1.06e-07!5;CL:0002159!5.94e-07!13;CL:0000622!6.78e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;3.16e-55;3!CL:0000349;3.11e-34;19!CL:0002537;4.31e-33;5!CL:0000244;6.47e-19;4!CL:0000731;6.47e-19;4!CL:0000317;3.27e-10;2!CL:1000448;3.27e-10;2!CL:0002308;3.27e-10;2!CL:0002140;3.27e-10;2!CL:0000134;1.24e-08;55!CL:0000723;5.62e-08;61!CL:0002166;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.47e-55,3;CL:0000349,3.20e-34,19;CL:0002537,4.31e-33,5;CL:0000244,5.64e-19,4;CL:0000731,5.64e-19,4;CL:0000317,3.58e-10,2;CL:1000448,3.58e-10,2;CL:0002308,3.58e-10,2;CL:0002140,3.58e-10,2;CL:0002166,2.79e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.69e-19;1 | |||
|ontology_enrichment_disease=DOID:1749!2.49e-08!14 | |ontology_enrichment_disease=DOID:1749!2.49e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.93e-21!14;UBERON:0000158!4.93e-21!14;UBERON:0000365!1.75e-18!5;UBERON:0005910!2.37e-15!6;UBERON:0003124!8.77e-14!7;UBERON:0000476!9.86e-13!3;UBERON:0000920!9.86e-13!3;UBERON:0000478!1.66e-11!24;UBERON:0001949!1.70e-11!3;UBERON:0000166!2.07e-09!21;UBERON:0000305!3.64e-09!7;UBERON:0000974!9.66e-09!10;UBERON:0003343!1.93e-08!4;UBERON:0004785!1.93e-08!4;UBERON:0004923!3.82e-08!57;UBERON:0004871!5.16e-08!8;UBERON:0000161!5.87e-08!35;UBERON:0004119!1.06e-07!169;UBERON:0000925!1.06e-07!169;UBERON:0006595!1.06e-07!169;UBERON:0003729!7.84e-07!5;UBERON:0000165!9.68e-07!28;UBERON:0000930!9.68e-07!28 | |ontology_enrichment_uberon=UBERON:0005631!4.93e-21!14;UBERON:0000158!4.93e-21!14;UBERON:0000365!1.75e-18!5;UBERON:0005910!2.37e-15!6;UBERON:0003124!8.77e-14!7;UBERON:0000476!9.86e-13!3;UBERON:0000920!9.86e-13!3;UBERON:0000478!1.66e-11!24;UBERON:0001949!1.70e-11!3;UBERON:0000166!2.07e-09!21;UBERON:0000305!3.64e-09!7;UBERON:0000974!9.66e-09!10;UBERON:0003343!1.93e-08!4;UBERON:0004785!1.93e-08!4;UBERON:0004923!3.82e-08!57;UBERON:0004871!5.16e-08!8;UBERON:0000161!5.87e-08!35;UBERON:0004119!1.06e-07!169;UBERON:0000925!1.06e-07!169;UBERON:0006595!1.06e-07!169;UBERON:0003729!7.84e-07!5;UBERON:0000165!9.68e-07!28;UBERON:0000930!9.68e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.54e-65;10!UBERON:0000158;6.54e-65;10!UBERON:0003124;3.16e-55;3!UBERON:0000920;3.16e-55;3!UBERON:0000478;1.47e-36;24!UBERON:0000305;7.15e-24;7!UBERON:0000365;2.42e-15;5!UBERON:0005910;5.94e-13;6!UBERON:0002419;3.27e-10;2!UBERON:0007771;3.27e-10;2!UBERON:0003297;3.27e-10;2!UBERON:0001821;3.27e-10;2!UBERON:0003487;3.27e-10;2!UBERON:0001820;3.27e-10;2!UBERON:0000486;6.26e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.13e-62,14;UBERON:0000158,1.13e-62,14;UBERON:0000920,3.47e-55,3;UBERON:0003124,1.21e-41,7;UBERON:0000478,1.51e-36,24;UBERON:0000305,7.15e-24,7;UBERON:0004871,5.52e-21,8;UBERON:0000365,2.17e-15,5;UBERON:0004923,3.72e-13,66;UBERON:0005910,5.42e-13,6;UBERON:0002419,3.58e-10,2;UBERON:0007771,3.58e-10,2;UBERON:0003297,3.58e-10,2;UBERON:0001821,3.58e-10,2;UBERON:0003487,3.58e-10,2;UBERON:0001820,3.58e-10,2;UBERON:0005089,3.58e-10,2;UBERON:0005088,3.58e-10,2 | |||
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| ||
|short_description=p17@RNF217 | |short_description=p17@RNF217 | ||
}} | }} |
Latest revision as of 07:04, 20 September 2015
Short description: | p17@RNF217 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_RNF217_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -136bp_to_ENST00000368415_5end |
EntrezGene: | RNF217 |
HGNC: | 21487 |
UniProt: | Q8TC41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.47e-55 | 3 |
extraembryonic cell | 3.20e-34 | 19 |
amnion mesenchymal stem cell | 4.31e-33 | 5 |
transitional epithelial cell | 5.64e-19 | 4 |
urothelial cell | 5.64e-19 | 4 |
sebum secreting cell | 3.58e-10 | 2 |
epithelial cell of sweat gland | 3.58e-10 | 2 |
epithelial cell of skin gland | 3.58e-10 | 2 |
acinar cell of sebaceous gland | 3.58e-10 | 2 |
epithelial cell of Malassez | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.13e-62 | 14 |
membranous layer | 1.13e-62 | 14 |
egg chorion | 3.47e-55 | 3 |
chorion | 1.21e-41 | 7 |
extraembryonic structure | 1.51e-36 | 24 |
amnion | 7.15e-24 | 7 |
somatic layer of lateral plate mesoderm | 5.52e-21 | 8 |
urothelium | 2.17e-15 | 5 |
organ component layer | 3.72e-13 | 66 |
transitional epithelium | 5.42e-13 | 6 |
skin gland | 3.58e-10 | 2 |
epidermis gland | 3.58e-10 | 2 |
gland of integumental system | 3.58e-10 | 2 |
sebaceous gland | 3.58e-10 | 2 |
skin sebaceous gland | 3.58e-10 | 2 |
sweat gland | 3.58e-10 | 2 |
sweat gland placode | 3.58e-10 | 2 |
sebaceous gland placode | 3.58e-10 | 2 |