FFCP PHASE1:Hg19::chr7:32133021..32133026,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:32133021..32133026,- | |||
|coexpression_cluster_id=C886 | |coexpression_cluster_id=C886 | ||
|description=CAGE_peak_at_chr7:32133021..32133026,- | |description=CAGE_peak_at_chr7:32133021..32133026,- | ||
|id=chr7:32133021..32133026,- | |id=chr7:32133021..32133026,- | ||
|ontology_enrichment_celltype=CL:0000057!8.27e-19!75;CL:0002620!2.70e-17!23;CL:0000055!6.14e-13!180;CL:0002580!2.21e-08!3;CL:0000197!4.82e-08!6;CL:0000098!4.82e-08!6;CL:0002167!4.82e-08!6;CL:1000306!2.32e-07!4;CL:0002547!2.32e-07!4 | |ontology_enrichment_celltype=CL:0000057!8.27e-19!75;CL:0002620!2.70e-17!23;CL:0000055!6.14e-13!180;CL:0002580!2.21e-08!3;CL:0000197!4.82e-08!6;CL:0000098!4.82e-08!6;CL:0002167!4.82e-08!6;CL:1000306!2.32e-07!4;CL:0002547!2.32e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:1000306;2.24e-21;4!CL:0002547;2.24e-21;4!CL:0000197;2.34e-14;6!CL:0000098;2.34e-14;6!CL:0002167;2.34e-14;6!CL:0000511;2.62e-10;1!CL:0002625;2.62e-10;1!CL:0000216;2.62e-10;1!CL:0002591;2.62e-10;1!CL:0002620;8.23e-10;23!CL:0002569;6.88e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,2.86e-21,4;CL:0002547,2.86e-21,4;CL:0000197,2.74e-14,6;CL:0000098,2.74e-14,6;CL:0002167,2.74e-14,6;CL:0000511,1.73e-10,1;CL:0002625,1.73e-10,1;CL:0000216,1.73e-10,1;CL:0002591,3.61e-10,1;CL:0002620,7.86e-10,23;CL:0000057,1.94e-08,76;CL:0002569,5.93e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.03e-09!5;DOID:450!2.03e-09!5;DOID:66!2.03e-09!5;DOID:423!2.03e-09!5;DOID:0080000!2.03e-09!5;DOID:11722!2.03e-09!5 | |ontology_enrichment_disease=DOID:17!2.03e-09!5;DOID:450!2.03e-09!5;DOID:66!2.03e-09!5;DOID:423!2.03e-09!5;DOID:0080000!2.03e-09!5;DOID:11722!2.03e-09!5 | ||
|ontology_enrichment_disease_v019=DOID:5662;2.62e-10;1!DOID:17;2.88e-08;5!DOID:450;2.88e-08;5!DOID:66;2.88e-08;5!DOID:423;2.88e-08;5!DOID:0080000;2.88e-08;5!DOID:11722;2.88e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,2.74e-10,1;DOID:17,2.36e-08,5;DOID:450,2.36e-08,5;DOID:66,2.36e-08,5;DOID:423,2.36e-08,5;DOID:0080000,2.36e-08,5;DOID:11722,2.36e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!6.90e-12!40;UBERON:0002199!1.02e-11!45;UBERON:0002416!1.02e-11!45;UBERON:0003102!7.95e-09!95;UBERON:0000415!2.32e-07!4;UBERON:0007240!2.32e-07!4;UBERON:0005742!2.32e-07!4;UBERON:0005734!2.32e-07!4;UBERON:0004664!2.32e-07!4;UBERON:0004663!2.32e-07!4 | |ontology_enrichment_uberon=UBERON:0002097!6.90e-12!40;UBERON:0002199!1.02e-11!45;UBERON:0002416!1.02e-11!45;UBERON:0003102!7.95e-09!95;UBERON:0000415!2.32e-07!4;UBERON:0007240!2.32e-07!4;UBERON:0005742!2.32e-07!4;UBERON:0005734!2.32e-07!4;UBERON:0004664!2.32e-07!4;UBERON:0004663!2.32e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.24e-21;4!UBERON:0000415;2.24e-21;4!UBERON:0007240;2.24e-21;4!UBERON:0005742;2.24e-21;4!UBERON:0005734;2.24e-21;4!UBERON:0004664;2.24e-21;4!UBERON:0004663;2.24e-21;4!UBERON:0001136;2.62e-10;1!UBERON:0001343;2.62e-10;1!UBERON:0004910;2.62e-10;1!UBERON:0004813;2.62e-10;1!UBERON:0000947;2.89e-07;21!UBERON:0010191;2.89e-07;21!UBERON:0003422;6.88e-07;6!UBERON:0004573;8.33e-07;33!UBERON:0004571;8.33e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,2.86e-21,4;UBERON:0007240,2.86e-21,4;UBERON:0005742,2.86e-21,4;UBERON:0005734,2.86e-21,4;UBERON:0004664,2.86e-21,4;UBERON:0004663,2.86e-21,4;UBERON:0004797,2.06e-12,7;UBERON:0001136,1.73e-10,1;UBERON:0001343,1.73e-10,1;UBERON:0004910,1.73e-10,1;UBERON:0005154,1.73e-10,1;UBERON:0005295,1.73e-10,1;UBERON:0004813,1.73e-10,1;UBERON:0005297,1.73e-10,1;UBERON:0005294,1.73e-10,1;UBERON:0010141,1.73e-10,1;UBERON:0005891,1.73e-10,1;UBERON:0002097,1.40e-07,41;UBERON:0001637,2.18e-07,42;UBERON:0003509,2.18e-07,42;UBERON:0004572,2.18e-07,42;UBERON:0000947,3.06e-07,21;UBERON:0010191,3.06e-07,21;UBERON:0003422,5.93e-07,6;UBERON:0004573,7.85e-07,33;UBERON:0004571,7.85e-07,33 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.13967460498122,28.2031555132156,2.0078563452417,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0,0.538168907066586,3.41691822109708,1.69545520927649,0.600182192168805,0,6.69865404118636,0.37223371266318,0.506328996723799,0.0974370051611986,1.00973509697646,0.920498986422993,0,1.42003837006646,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91699884393266,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.713715955188647,2.20783381047509,2.6942525448324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0.280660094433074,1.02511319404561,0,0.64341568457443,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,4.7221852024596,0,0,0.532306030317022,0,0,0,0,0,0,0,0,1.27281299170375,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,1.13008116620243,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.6251880789308,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0.554805861502613,0.189403005275089,0.50313580350515,0,0.686520205190771,0.907385542579434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21023041222112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20041606606193,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.13967460498122,28.2031555132156,2.0078563452417,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0,0.538168907066586,3.41691822109708,1.69545520927649,0.600182192168805,0,6.69865404118636,0.37223371266318,0.506328996723799,0.0974370051611986,1.00973509697646,0.920498986422993,0,1.42003837006646,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91699884393266,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.713715955188647,2.20783381047509,2.6942525448324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0.280660094433074,1.02511319404561,0,0.64341568457443,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,4.7221852024596,0,0,0.532306030317022,0,0,0,0,0,0,0,0,1.27281299170375,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,1.13008116620243,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.6251880789308,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0.554805861502613,0.189403005275089,0.50313580350515,0,0.686520205190771,0.907385542579434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21023041222112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20041606606193,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:32133021..32133026,- | |short_description=p@chr7:32133021..32133026,- | ||
}} | }} |
Latest revision as of 09:29, 31 July 2015
Short description: | p@chr7:32133021..32133026, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:32133021..32133026, - |
Coexpression cluster: | C886_large_endometrial_Fibroblast_renal_hepatoblastoma_hepatocellular_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 2.86e-21 | 4 |
fibroblast of the aortic adventitia | 2.86e-21 | 4 |
receptor cell | 2.74e-14 | 6 |
sensory epithelial cell | 2.74e-14 | 6 |
olfactory epithelial cell | 2.74e-14 | 6 |
androgen binding protein secreting cell | 1.73e-10 | 1 |
seminiferous tubule epithelial cell | 1.73e-10 | 1 |
Sertoli cell | 1.73e-10 | 1 |
smooth muscle cell of the pulmonary artery | 3.61e-10 | 1 |
skin fibroblast | 7.86e-10 | 23 |
fibroblast | 1.94e-08 | 76 |
mesenchymal stem cell of umbilical cord | 5.93e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
artery wall | 2.86e-21 | 4 |
tunica adventitia of artery | 2.86e-21 | 4 |
adventitia | 2.86e-21 | 4 |
tunica adventitia of blood vessel | 2.86e-21 | 4 |
aorta tunica adventitia | 2.86e-21 | 4 |
aorta wall | 2.86e-21 | 4 |
blood vessel layer | 2.06e-12 | 7 |
mesothelium | 1.73e-10 | 1 |
seminiferous tubule of testis | 1.73e-10 | 1 |
epithelium of male gonad | 1.73e-10 | 1 |
epithelial cord | 1.73e-10 | 1 |
sex cord | 1.73e-10 | 1 |
seminiferous tubule epithelium | 1.73e-10 | 1 |
testis sex cord | 1.73e-10 | 1 |
genital ridge | 1.73e-10 | 1 |
primitive sex cord of indifferent gonad | 1.73e-10 | 1 |
coelomic epithelium | 1.73e-10 | 1 |
skin of body | 1.40e-07 | 41 |
artery | 2.18e-07 | 42 |
arterial blood vessel | 2.18e-07 | 42 |
arterial system | 2.18e-07 | 42 |
aorta | 3.06e-07 | 21 |
aortic system | 3.06e-07 | 21 |
mesenchyme of umbilical cord | 5.93e-07 | 6 |
systemic artery | 7.85e-07 | 33 |
systemic arterial system | 7.85e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 2.74e-10 | 1 |
musculoskeletal system disease | 2.36e-08 | 5 |
myotonic disease | 2.36e-08 | 5 |
muscle tissue disease | 2.36e-08 | 5 |
myopathy | 2.36e-08 | 5 |
muscular disease | 2.36e-08 | 5 |
myotonic dystrophy | 2.36e-08 | 5 |