FFCP PHASE1:Hg19::chrX:110513703..110513741,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=827 | |EntrezGene=827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1483 | |HGNC=1483 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6Q1 | |UniProt=Q9Y6Q1 | ||
|association_with_transcript=9bp_to_ENST00000324068,uc004epc.1_5end | |association_with_transcript=9bp_to_ENST00000324068,uc004epc.1_5end | ||
|cluster_id=chrX:110513703..110513741,- | |||
|coexpression_cluster_id=C2025 | |coexpression_cluster_id=C2025 | ||
|description=CAGE_peak_1_at_CAPN6_5end | |description=CAGE_peak_1_at_CAPN6_5end | ||
|id=chrX:110513703..110513741,- | |id=chrX:110513703..110513741,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.06e-08;5!CL:0000349;1.14e-07;19!CL:0002541;7.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.31e-08,5;CL:0000349,1.14e-07,19;CL:0002541,7.58e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;7.76e-08;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.60e-12!115;UBERON:0005631!1.05e-11!14;UBERON:0000158!1.05e-11!14;UBERON:0005409!6.11e-09!35;UBERON:0003124!4.12e-08!7;UBERON:0001007!4.56e-07!155;UBERON:0001555!4.56e-07!155;UBERON:0007026!4.56e-07!155;UBERON:0004119!4.72e-07!169;UBERON:0000925!4.72e-07!169;UBERON:0006595!4.72e-07!169;UBERON:0004921!5.08e-07!129;UBERON:0004185!5.08e-07!129;UBERON:0000478!5.35e-07!24 | |ontology_enrichment_uberon=UBERON:0007023!1.60e-12!115;UBERON:0005631!1.05e-11!14;UBERON:0000158!1.05e-11!14;UBERON:0005409!6.11e-09!35;UBERON:0003124!4.12e-08!7;UBERON:0001007!4.56e-07!155;UBERON:0001555!4.56e-07!155;UBERON:0007026!4.56e-07!155;UBERON:0004119!4.72e-07!169;UBERON:0000925!4.72e-07!169;UBERON:0006595!4.72e-07!169;UBERON:0004921!5.08e-07!129;UBERON:0004185!5.08e-07!129;UBERON:0000478!5.35e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;9.85e-13;49!UBERON:0005631;7.27e-11;10!UBERON:0000158;7.27e-11;10!UBERON:0004921;6.33e-09;33!UBERON:0000478;1.75e-08;24!UBERON:0005409;6.96e-07;22!UBERON:0003124;7.57e-07;3!UBERON:0000920;7.57e-07;3!UBERON:0006947;8.08e-07;3!UBERON:0004054;8.08e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.31e-14,14;UBERON:0000158,5.31e-14,14;UBERON:0003124,1.11e-09,7;UBERON:0007023,1.41e-09,114;UBERON:0000478,1.75e-08,24;UBERON:0005409,4.97e-08,25;UBERON:0000920,7.58e-07,3;UBERON:0006947,8.02e-07,3;UBERON:0004054,8.02e-07,3 | |||
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| 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| ||
|short_description=p1@CAPN6 | |short_description=p1@CAPN6 | ||
}} | }} |
Latest revision as of 01:36, 19 September 2015
Short description: | p1@CAPN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAPN6_5end |
Coexpression cluster: | C2025_placenta_skeletal_tongue_trachea_chorionic_epididymis_throat |
Association with transcript: | 9bp_to_ENST00000324068, uc004epc.1_5end |
EntrezGene: | CAPN6 |
HGNC: | 1483 |
UniProt: | Q9Y6Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.31e-08 | 5 |
extraembryonic cell | 1.14e-07 | 19 |
chorionic membrane mesenchymal stem cell | 7.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.31e-14 | 14 |
membranous layer | 5.31e-14 | 14 |
chorion | 1.11e-09 | 7 |
adult organism | 1.41e-09 | 114 |
extraembryonic structure | 1.75e-08 | 24 |
gastrointestinal system | 4.97e-08 | 25 |
egg chorion | 7.58e-07 | 3 |
male genital duct | 8.02e-07 | 3 |
internal male genitalia | 8.02e-07 | 3 |