Personal tools

UBERON:0001137: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0001137
|name=back
|namespace=
|def="In humans: large posterior area of the human body, rising from the top of the buttocks to the back of the neck and the shoulders. It is the surface opposite to the chest, its height being defined by the vertebral column (commonly referred to as the spine or backbone) and its breadth being supported by the ribcage and shoulders. The spinal canal runs through the spine and provides nerves to the rest of the body[WP]." [Wikipedia:Back]
|xref=BTO:0001713;;EFO:0001405;;FMA:14181;;GAID:30;;galen:Back;;http://upload.wikimedia.org/wikipedia/commons/thumb/e/ee/432px-Gray-back.PNG/200px-432px-Gray-back.PNG;;MA:0000020;;MESH:A.01.176;;ncithesaurus:Back;;OpenCyc:Mx4rvVkEU5wpEbGdrcN5Y29ycA
|is_a=UBERON:0000477
|synonym="back of body proper" EXACT [FMA:14181];;"back of trunk" EXACT [MA:0000020]
|comment=This class was created automatically from a combination of ontologies
|alt_id=UBERON:FMA_14181-MA_0000020
|alt_id=UBERON:FMA_14181-MA_0000020
|disjoint_from=
|anatomical_img_id=FMA:14181
|union_of=
|comment=Taxon notes: In humans, called the back, a large posterior area of the human body, rising from the top of the buttocks to the back of the neck and the shoulders. It is the surface opposite to the chest, its height being defined by the vertebral column (commonly referred to as the spine or backbone) and its breadth being supported by the ribcage and shoulders. The spinal canal runs through the spine and provides nerves to the rest of the body
|created_by=
|created_by=
|obo_creation_date=
|def="The dorsal part of an animal, which in vertebrares includes the vertebral column. [cjm]." [Dorsum_(anatomy), UBERONREF:0000006]
|subset=uberon_slim
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0001137
|is_a=UBERON:0000475
|is_obsolete=
|located_in=
|located_in=
|part_of=UBERON:0002100
|name=dorsum
|namespace=FANTOM
|obo_creation_date=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=uberon_slim
|preceded_by=
|synonym="back" EXACT [FMA:14181];;"back of body proper" EXACT [FMA:14181]
|union_of=
|xref=BTO:0001713;;EFO:0001405;;FMA:14181;;GAID:30;;galen:Back;;http://upload.wikimedia.org/wikipedia/commons/thumb/e/ee/432px-Gray-back.PNG/200px-432px-Gray-back.PNG;;MESH:A.01.176;;ncithesaurus:Back;;OpenCyc:Mx4rvVkEU5wpEbGdrcN5Y29ycA
}}
}}

Latest revision as of 17:16, 12 September 2014

Name:dorsum
Namespace:FANTOM
Definition:"The dorsal part of an animal, which in vertebrares includes the vertebral column. [cjm]." [Dorsum_(anatomy), UBERONREF:0000006]
Xrefs:
links:

BTO:0001713
EFO:0001405
FMA:14181
GAID:30
galen:Back
[1]
MESH:A.01.176
ncithesaurus:Back

OpenCyc:Mx4rvVkEU5wpEbGdrcN5Y29ycA
Synonyms: "back" EXACT [FMA:14181]
"back of body proper" EXACT [FMA:14181]
Comments:Taxon notes: In humans, called the back, a large posterior area of the human body, rising from the top of the buttocks to the back of the neck and the shoulders. It is the surface opposite to the chest, its height being defined by the vertebral column (commonly referred to as the spine or backbone) and its breadth being supported by the ribcage and shoulders. The spinal canal runs through the spine and provides nerves to the rest of the body
Alt_id: UBERON:FMA_14181-MA_0000020
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000475(organism subdivision)



Children

part of:UBERON:0002240 (spinal cord),UBERON:0005174 (dorsal region element)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001137 (dorsum), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.98e-131FFCP PHASE1:Hg19::chr8:131864839..131864841,+#_c1d2ae643b7f89bf19d09209bef8ae9bp@chr8:131864839..131864841, +
8.98e-131FFCP PHASE2:Hg19::chr8:131864839..131864841,+#_c1d2ae643b7f89bf19d09209bef8ae9bp@chr8:131864839..131864841, +
3.04e-85FFCP PHASE1:Hg19::chr17:42993851..42993858,-#_864adb8870e78f55e3687dca8b80f234p@chr17:42993851..42993858, -
3.04e-85FFCP PHASE2:Hg19::chr17:42993851..42993858,-#_864adb8870e78f55e3687dca8b80f234p@chr17:42993851..42993858, -
4.06e-85FFCP PHASE2:Hg19::chr17:42993904..42993912,-#_b5c3eb7596e8b17005459c3980ec4d6ep@chr17:42993904..42993912, -
4.06e-85FFCP PHASE1:Hg19::chr17:42993904..42993912,-#_b5c3eb7596e8b17005459c3980ec4d6ep@chr17:42993904..42993912, -
4.03e-84FFCP PHASE1:Hg19::chr13:109248336..109248343,+#_abaf9965995849d5fda137b3ef22678bp7@MYO16
4.03e-84FFCP PHASE2:Hg19::chr13:109248336..109248343,+#_abaf9965995849d5fda137b3ef22678bp7@MYO16
4.55e-74FFCP PHASE1:Hg19::chr1:161274636..161274641,-#_a2fd504e6ab455ed0b9fafccfbf01ddfp@chr1:161274636..161274641, -
4.55e-74FFCP PHASE2:Hg19::chr1:161274636..161274641,-#_a2fd504e6ab455ed0b9fafccfbf01ddfp@chr1:161274636..161274641, -
2.48e-72FFCP PHASE2:Mm9::chr18:84268738..84268777,-#_167085c3eaf9f4252383e5add3a0f466p@chr18:84268738..84268777, -
2.48e-72FFCP PHASE2:Mm9::chr11:96608388..96608420,+#_167085c3eaf9f4252383e5add3a0f466p@chr11:96608388..96608420, +
2.48e-72FFCP PHASE1:Mm9::chr11:96608388..96608420,+#_167085c3eaf9f4252383e5add3a0f466p@chr11:96608388..96608420, +
2.48e-72FFCP PHASE1:Mm9::chr18:84268738..84268777,-#_167085c3eaf9f4252383e5add3a0f466p@chr18:84268738..84268777, -
2.48e-72FFCP PHASE1:Mm9::chr2:70053872..70053879,+#_167085c3eaf9f4252383e5add3a0f466p@chr2:70053872..70053879, +
2.48e-72FFCP PHASE2:Mm9::chr14:33413108..33413118,+#_167085c3eaf9f4252383e5add3a0f466p3@Prrxl1
2.48e-72FFCP PHASE1:Mm9::chr14:33413108..33413118,+#_167085c3eaf9f4252383e5add3a0f466p3@Prrxl1
2.48e-72FFCP PHASE2:Mm9::chr2:70053872..70053879,+#_167085c3eaf9f4252383e5add3a0f466p@chr2:70053872..70053879, +
9.82e-67FFCP PHASE1:Hg19::chrX:100489588..100489605,+#_361e6a8e30e9f7faf0ae2e2f318ea0bep@chrX:100489588..100489605, +
9.82e-67FFCP PHASE2:Hg19::chrX:100489588..100489605,+#_361e6a8e30e9f7faf0ae2e2f318ea0bep@chrX:100489588..100489605, +
9.82e-67FFCP PHASE1:Hg19::chr16:19800150..19800179,+#_361e6a8e30e9f7faf0ae2e2f318ea0bep@chr16:19800150..19800179, +
9.82e-67FFCP PHASE2:Hg19::chr16:19800150..19800179,+#_361e6a8e30e9f7faf0ae2e2f318ea0bep@chr16:19800150..19800179, +
1.54e-66FFCP PHASE1:Hg19::chr11:58390160..58390175,+#_4017b51879724337856ed7d34a851bbep2@CNTF
1.54e-66FFCP PHASE2:Hg19::chr11:58390160..58390175,+#_4017b51879724337856ed7d34a851bbep2@CNTF
1.71e-66FFCP PHASE2:Hg19::chr15:46702462..46702465,+#_393b39b317466de7d17461bf821d718cp@chr15:46702462..46702465, +
1.71e-66FFCP PHASE2:Hg19::chr1:161275096..161275109,-#_393b39b317466de7d17461bf821d718cp@chr1:161275096..161275109, -
1.71e-66FFCP PHASE1:Hg19::chr1:161275096..161275109,-#_393b39b317466de7d17461bf821d718cp@chr1:161275096..161275109, -
1.71e-66FFCP PHASE1:Hg19::chr15:46702462..46702465,+#_393b39b317466de7d17461bf821d718cp@chr15:46702462..46702465, +
2.4e-66FFCP PHASE2:Hg19::chr1:60460743..60460750,+#_56f92752a28ffbf87545f7b609d74d05p@chr1:60460743..60460750, +
2.4e-66FFCP PHASE1:Hg19::chr17:42984119..42984130,-#_56f92752a28ffbf87545f7b609d74d05p43@GFAP
2.4e-66FFCP PHASE1:Hg19::chr1:60460743..60460750,+#_56f92752a28ffbf87545f7b609d74d05p@chr1:60460743..60460750, +
2.4e-66FFCP PHASE2:Hg19::chr17:42984119..42984130,-#_56f92752a28ffbf87545f7b609d74d05p43@GFAP
3.35e-66FFCP PHASE2:Hg19::chr17:42983263..42983264,-#_344c5ab4c357677fe6ac83834326001dp@chr17:42983263..42983264, -
3.35e-66FFCP PHASE1:Hg19::chr17:42983263..42983264,-#_344c5ab4c357677fe6ac83834326001dp@chr17:42983263..42983264, -
1.35e-65FFCP PHASE1:Mm9::chr11:96132456..96132467,+#_7492ad25d66c49a7ba4c28b25f4335b1p4@Hoxb9
1.35e-65FFCP PHASE2:Mm9::chr11:96132456..96132467,+#_7492ad25d66c49a7ba4c28b25f4335b1p4@Hoxb9
1.71e-64FFCP PHASE2:Mm9::chr7:57165602..57165612,+#_616f1ad2c2420e6d03d73168c7c0572cp6@Slc6a5
1.71e-64FFCP PHASE1:Mm9::chr7:57165602..57165612,+#_616f1ad2c2420e6d03d73168c7c0572cp6@Slc6a5
2.34e-60FFCP PHASE1:Mm9::chr11:96143545..96143556,+#_4730436c442e10cfacc6149b6daca065p6@Hoxb8
2.34e-60FFCP PHASE2:Mm9::chr11:96143545..96143556,+#_4730436c442e10cfacc6149b6daca065p6@Hoxb8
9.99e-60FFCP PHASE2:Hg19::chr18:77014816..77014819,-#_800f0c975aecc37d32591886cf7d8a87p@chr18:77014816..77014819, -
9.99e-60FFCP PHASE1:Hg19::chr18:77014816..77014819,-#_800f0c975aecc37d32591886cf7d8a87p@chr18:77014816..77014819, -
4.07e-59FFCP PHASE2:Hg19::chr16:74808506..74808519,-#_0a68e59032c77dd6127591bd2a77be4fp4@FA2H
4.07e-59FFCP PHASE1:Hg19::chr16:74808506..74808519,-#_0a68e59032c77dd6127591bd2a77be4fp4@FA2H
6.9e-59FFCP PHASE2:Mm9::chr11:33103589..33103599,-#_719329ad35b8491250b7dcc3a773295fp3@Tlx3
6.9e-59FFCP PHASE1:Mm9::chr11:33103589..33103599,-#_719329ad35b8491250b7dcc3a773295fp3@Tlx3
1.09e-58FFCP PHASE1:Mm9::chr4:150371190..150371197,+#_9b7f826149f6f501f1b3a6906800d94dp1@Uts2
1.09e-58FFCP PHASE2:Mm9::chr4:150371190..150371197,+#_9b7f826149f6f501f1b3a6906800d94dp1@Uts2
1.36e-58FFCP PHASE1:Mm9::chr11:96146541..96146544,+#_299ad0129ea1bdf229c6504796eb1f22p@chr11:96146541..96146544, +
1.36e-58FFCP PHASE2:Mm9::chr11:96146541..96146544,+#_299ad0129ea1bdf229c6504796eb1f22p@chr11:96146541..96146544, +
3.91e-58FFCP PHASE1:Mm9::chr11:96148092..96148105,+#_03739023a2b7bbaf1401199ba62d08a1p@chr11:96148092..96148105, +
3.91e-58FFCP PHASE2:Mm9::chr11:96148092..96148105,+#_03739023a2b7bbaf1401199ba62d08a1p@chr11:96148092..96148105, +
3.91e-58FFCP PHASE2:Mm9::chr7:94732458..94732467,+#_03739023a2b7bbaf1401199ba62d08a1p13@Grm5
3.91e-58FFCP PHASE1:Mm9::chr7:94732458..94732467,+#_03739023a2b7bbaf1401199ba62d08a1p13@Grm5
2.88e-55FFCP PHASE2:Hg19::chr6:133424178..133424190,-#_8927deb199075f3a4a43bd7cfd3ec3c9p@chr6:133424178..133424190, -
2.88e-55FFCP PHASE1:Hg19::chr6:133424178..133424190,-#_8927deb199075f3a4a43bd7cfd3ec3c9p@chr6:133424178..133424190, -
4.17e-55FFCP PHASE2:Hg19::chrX:100489564..100489583,+#_c089ca19121339be2ed7384a08dcd6e9p@chrX:100489564..100489583, +
4.17e-55FFCP PHASE1:Hg19::chrX:100489564..100489583,+#_c089ca19121339be2ed7384a08dcd6e9p@chrX:100489564..100489583, +
4.17e-55FFCP PHASE2:Hg19::chr1:161275189..161275203,-#_c089ca19121339be2ed7384a08dcd6e9p@chr1:161275189..161275203, -
4.17e-55FFCP PHASE1:Hg19::chr1:161275189..161275203,-#_c089ca19121339be2ed7384a08dcd6e9p@chr1:161275189..161275203, -
7.24e-55FFCP PHASE1:Hg19::chr17:42983316..42983326,-#_2aa25ecec584d3a9e073aa4948f1f473p@chr17:42983316..42983326, -
7.24e-55FFCP PHASE2:Hg19::chr17:42983316..42983326,-#_2aa25ecec584d3a9e073aa4948f1f473p@chr17:42983316..42983326, -
1.81e-54FFCP PHASE1:Hg19::chr1:161275111..161275127,-#_0793689396e90b30d8ec64dcfc0a8b49p@chr1:161275111..161275127, -
1.81e-54FFCP PHASE2:Hg19::chr2:27073036..27073042,-#_0793689396e90b30d8ec64dcfc0a8b49p@chr2:27073036..27073042, -
1.81e-54FFCP PHASE1:Hg19::chr2:27073036..27073042,-#_0793689396e90b30d8ec64dcfc0a8b49p@chr2:27073036..27073042, -
1.81e-54FFCP PHASE2:Hg19::chr1:161275111..161275127,-#_0793689396e90b30d8ec64dcfc0a8b49p@chr1:161275111..161275127, -
2.19e-53FFCP PHASE2:Hg19::chr14:36367955..36367964,+#_812c5533c0dfc2fbdb05c95c696675c9p@chr14:36367955..36367964, +
2.19e-53FFCP PHASE1:Hg19::chr14:36367955..36367964,+#_812c5533c0dfc2fbdb05c95c696675c9p@chr14:36367955..36367964, +
2.97e-53FFCP PHASE1:Mm9::chr5:24032551..24032557,-#_5f9fc3c21b8ed54f77a45b1eb9789774p1@Gbx1
2.97e-53FFCP PHASE2:Mm9::chr5:24032551..24032557,-#_5f9fc3c21b8ed54f77a45b1eb9789774p1@Gbx1
3.75e-53FFCP PHASE2:Hg19::chr11:114146042..114146050,-#_e96f87f5deb95b8601c1b914918cfe6ap@chr11:114146042..114146050, -
3.75e-53FFCP PHASE1:Hg19::chr11:114146042..114146050,-#_e96f87f5deb95b8601c1b914918cfe6ap@chr11:114146042..114146050, -
4.89e-53FFCP PHASE1:Hg19::chr16:7137754..7137799,+#_c6aaa6641dbadd82b55371e7bfda3c19p@chr16:7137754..7137799, +
4.89e-53FFCP PHASE2:Hg19::chr16:7137754..7137799,+#_c6aaa6641dbadd82b55371e7bfda3c19p@chr16:7137754..7137799, +
4.89e-53FFCP PHASE2:Hg19::chr1:167905363..167905364,-#_c6aaa6641dbadd82b55371e7bfda3c19p12@BRP44
4.89e-53FFCP PHASE1:Hg19::chr1:167905363..167905364,-#_c6aaa6641dbadd82b55371e7bfda3c19p12@BRP44
6.39e-53FFCP PHASE2:Hg19::chr11:119999153..119999163,-#_248ca3063094ac657ace383a722bec03p24@TRIM29
6.39e-53FFCP PHASE1:Hg19::chr11:119999153..119999163,-#_248ca3063094ac657ace383a722bec03p24@TRIM29
6.39e-53FFCP PHASE1:Hg19::chr6:151054827..151054836,+#_248ca3063094ac657ace383a722bec03p23@PLEKHG1
6.39e-53FFCP PHASE2:Hg19::chr6:151054827..151054836,+#_248ca3063094ac657ace383a722bec03p23@PLEKHG1
1.99e-52FFCP PHASE2:Mm9::chr2:74530108..74530131,+#_5c353cb70624cb0baacb58d8d477e7e2p@chr2:74530108..74530131, +
1.99e-52FFCP PHASE2:Mm9::chr11:96160098..96160112,+#_5c353cb70624cb0baacb58d8d477e7e2p8@Hoxb6
1.99e-52FFCP PHASE1:Mm9::chr2:74530108..74530131,+#_5c353cb70624cb0baacb58d8d477e7e2p@chr2:74530108..74530131, +
1.99e-52FFCP PHASE1:Mm9::chr11:96160098..96160112,+#_5c353cb70624cb0baacb58d8d477e7e2p8@Hoxb6
2.3e-52FFCP PHASE1:Mm9::chr7:57165453..57165473,+#_6f3b6851283d18431c64b2050f2d6e37p3@Slc6a5
2.3e-52FFCP PHASE2:Mm9::chr7:57165453..57165473,+#_6f3b6851283d18431c64b2050f2d6e37p3@Slc6a5
4.11e-52FFCP PHASE2:Mm9::chr2:74529917..74529926,+#_8cff22ff83eb7d5345a0116e1ed9a400p5@Hoxd10
4.11e-52FFCP PHASE1:Mm9::chr2:74529917..74529926,+#_8cff22ff83eb7d5345a0116e1ed9a400p5@Hoxd10
8.11e-51FFCP PHASE2:Hg19::chr17:42989173..42989181,-#_229940a64a5d09f9140fad0c0cfa3174p40@GFAP
8.11e-51FFCP PHASE1:Hg19::chr17:42989173..42989181,-#_229940a64a5d09f9140fad0c0cfa3174p40@GFAP
1.89e-50FFCP PHASE2:Hg19::chr17:42983296..42983307,-#_6ea54bd87e4ae09d3dc7fca2dd5099ddp@chr17:42983296..42983307, -
1.89e-50FFCP PHASE1:Hg19::chr17:42983296..42983307,-#_6ea54bd87e4ae09d3dc7fca2dd5099ddp@chr17:42983296..42983307, -
2.23e-50FFCP PHASE1:Hg19::chrX:106692569..106692585,+#_857cac040ba0115c41ad691e364e462ep@chrX:106692569..106692585, +
2.23e-50FFCP PHASE2:Hg19::chrX:106692569..106692585,+#_857cac040ba0115c41ad691e364e462ep@chrX:106692569..106692585, +
2.23e-50FFCP PHASE1:Hg19::chrX:103046616..103046621,+#_857cac040ba0115c41ad691e364e462ep@chrX:103046616..103046621, +
2.23e-50FFCP PHASE2:Hg19::chrX:103046616..103046621,+#_857cac040ba0115c41ad691e364e462ep@chrX:103046616..103046621, +
1.47e-48FFCP PHASE2:Mm9::chr15:102355046..102355050,-#_983a01921f7b61d59177e10c95954de5p1@Npff
1.47e-48FFCP PHASE1:Mm9::chr15:102355046..102355050,-#_983a01921f7b61d59177e10c95954de5p1@Npff
2.57e-48FFCP PHASE1:Mm9::chr2:135883447..135883459,+#_14475b08ebe2de32da5250d98c6b0772p12@6330527O06Rik
2.57e-48FFCP PHASE2:Mm9::chr2:135883447..135883459,+#_14475b08ebe2de32da5250d98c6b0772p12@6330527O06Rik

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0001137&oldid=3277201"