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{{UBERON
{{UBERON
|id=UBERON:0001204
|alt_id=UBERON:FMA_14933-MA_0002686
|name=mucosa of small intestine
|namespace=
|def="A mucosa that is part of a small intestine [Obol]." [OBOL:automatic]
|xref=BTO:0001259;;FMA:14933;;MA:0002686;;ncithesaurus:Small_Intestinal_Mucosa;;SCTID:362144000
|is_a=UBERON:0001242
|synonym="mucosa of organ of small bowel" EXACT [OBOL:automatic];;"mucosa of organ of small intestine" EXACT [OBOL:automatic];;"mucosa of small bowel" EXACT [OBOL:automatic];;"mucous membrane of small bowel" EXACT [OBOL:automatic];;"mucous membrane of small intestine" EXACT [];;"organ mucosa of small bowel" EXACT [OBOL:automatic];;"organ mucosa of small intestine" EXACT [OBOL:automatic];;"small bowel mucosa" EXACT [OBOL:automatic];;"small bowel mucosa of organ" EXACT [OBOL:automatic];;"small bowel mucous membrane" EXACT [OBOL:automatic];;"small bowel organ mucosa" EXACT [OBOL:automatic];;"small intestinal mucosa" EXACT [];;"small intestine mucosa" EXACT [];;"small intestine mucosa of organ" EXACT [OBOL:automatic];;"small intestine mucous membrane" EXACT [];;"small intestine organ mucosa" EXACT [OBOL:automatic];;"tunica mucosa (intestinum tenue)" EXACT [];;"tunica mucosa intestini tenuis" EXACT [FMA:14933, FMA:TA]
|comment=This class was created automatically from a combination of ontologies
|comment=This class was created automatically from a combination of ontologies
|alt_id=UBERON:FMA_14933-MA_0002686
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A mucosa that is part of a small intestine [Obol]." [OBOL:automatic]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0001204
|is_a=UBERON:0001242
|is_obsolete=
|located_in=
|located_in=
|part_of=UBERON:0001168;;UBERON:0001242;;UBERON:0002108
|name=mucosa of small intestine
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0002108;;UBERON:0001168;;UBERON:0001242;;UBERON:0002108
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="mucosa of organ of small bowel" EXACT [OBOL:automatic];;"mucosa of organ of small intestine" EXACT [OBOL:automatic];;"mucosa of small bowel" EXACT [OBOL:automatic];;"mucous membrane of small bowel" EXACT [OBOL:automatic];;"mucous membrane of small intestine" EXACT [];;"organ mucosa of small bowel" EXACT [OBOL:automatic];;"organ mucosa of small intestine" EXACT [OBOL:automatic];;"small bowel mucosa" EXACT [OBOL:automatic];;"small bowel mucosa of organ" EXACT [OBOL:automatic];;"small bowel mucous membrane" EXACT [OBOL:automatic];;"small bowel organ mucosa" EXACT [OBOL:automatic];;"small intestinal mucosa" EXACT [];;"small intestine mucosa" EXACT [];;"small intestine mucosa of organ" EXACT [OBOL:automatic];;"small intestine mucous membrane" EXACT [];;"small intestine organ mucosa" EXACT [OBOL:automatic];;"tunica mucosa (intestinum tenue)" EXACT [];;"tunica mucosa intestini tenuis" EXACT [FMA:14933, FMA:TA]
|union_of=
|xref=BTO:0001259;;FMA:14933;;MA:0002686;;ncithesaurus:Small_Intestinal_Mucosa;;SCTID:362144000
}}
}}

Latest revision as of 17:16, 12 September 2014

Name:mucosa of small intestine
Namespace:FANTOM
Definition:"A mucosa that is part of a small intestine [Obol]." [OBOL:automatic]
Xrefs:
links:

BTO:0001259
FMA:14933
MA:0002686
ncithesaurus:Small_Intestinal_Mucosa

SCTID:362144000
Synonyms: "mucosa of organ of small bowel" EXACT [OBOL:automatic]
"mucosa of organ of small intestine" EXACT [OBOL:automatic]
"mucosa of small bowel" EXACT [OBOL:automatic]
"mucous membrane of small bowel" EXACT [OBOL:automatic]
"mucous membrane of small intestine" EXACT []
"organ mucosa of small bowel" EXACT [OBOL:automatic]
"organ mucosa of small intestine" EXACT [OBOL:automatic]
"small bowel mucosa" EXACT [OBOL:automatic]
"small bowel mucosa of organ" EXACT [OBOL:automatic]
"small bowel mucous membrane" EXACT [OBOL:automatic]
"small bowel organ mucosa" EXACT [OBOL:automatic]
"small intestinal mucosa" EXACT []
"small intestine mucosa" EXACT []
"small intestine mucosa of organ" EXACT [OBOL:automatic]
"small intestine mucous membrane" EXACT []
"small intestine organ mucosa" EXACT [OBOL:automatic]
"tunica mucosa (intestinum tenue)" EXACT []
"tunica mucosa intestini tenuis" EXACT [FMA:14933, FMA:TA]
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_14933-MA_0002686

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001242(intestinal mucosa)
part_of:UBERON:0002108(small intestine),UBERON:0001168(wall of small intestine),UBERON:0001242(intestinal mucosa),UBERON:0002108(small intestine)



Children

is a:UBERON:0000331 (ileal mucosa)
part of:UBERON:0001902 (epithelium of small intestine)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001204 (mucosa of small intestine), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE1:Mm9::chr4:5463968..5463972,+#_03cc7190c5f56f9d5e0907757783ea40p@chr4:5463968..5463972, +
1.58e-86FFCP PHASE1:Mm9::chr16:32477713..32477720,-#_03cc7190c5f56f9d5e0907757783ea40p@chr16:32477713..32477720, -
1.58e-86FFCP PHASE2:Mm9::chr11:43412172..43412177,-#_03cc7190c5f56f9d5e0907757783ea40p@chr11:43412172..43412177, -
1.58e-86FFCP PHASE2:Mm9::chr16:32477713..32477720,-#_03cc7190c5f56f9d5e0907757783ea40p@chr16:32477713..32477720, -
1.58e-86FFCP PHASE2:Mm9::chr4:5463968..5463972,+#_03cc7190c5f56f9d5e0907757783ea40p@chr4:5463968..5463972, +
1.58e-86FFCP PHASE1:Mm9::chr11:43412172..43412177,-#_03cc7190c5f56f9d5e0907757783ea40p@chr11:43412172..43412177, -
1.33e-65FFCP PHASE1:Mm9::chr11:43412139..43412149,-#_beb62b95f21d3b32237e8f7fb80e4d8ap@chr11:43412139..43412149, -
1.33e-65FFCP PHASE2:Mm9::chr11:43412139..43412149,-#_beb62b95f21d3b32237e8f7fb80e4d8ap@chr11:43412139..43412149, -
3.28e-58FFCP PHASE2:Mm9::chr3:80191466..80191470,+#_2c26f2a1b8a3832f58fab5f27ea65d8bp@chr3:80191466..80191470, +
3.28e-58FFCP PHASE2:Mm9::chr11:43412215..43412219,-#_2c26f2a1b8a3832f58fab5f27ea65d8bp@chr11:43412215..43412219, -
3.28e-58FFCP PHASE1:Mm9::chr5:31350252..31350259,-#_2c26f2a1b8a3832f58fab5f27ea65d8bp13@Slc5a6
3.28e-58FFCP PHASE1:Mm9::chr3:80191466..80191470,+#_2c26f2a1b8a3832f58fab5f27ea65d8bp@chr3:80191466..80191470, +
3.28e-58FFCP PHASE1:Mm9::chr10:127165632..127165636,+#_2c26f2a1b8a3832f58fab5f27ea65d8bp@chr10:127165632..127165636, +
3.28e-58FFCP PHASE2:Mm9::chr15:70621810..70621814,-#_2c26f2a1b8a3832f58fab5f27ea65d8bp@chr15:70621810..70621814, -
3.28e-58FFCP PHASE1:Mm9::chr15:70621810..70621814,-#_2c26f2a1b8a3832f58fab5f27ea65d8bp@chr15:70621810..70621814, -
3.28e-58FFCP PHASE2:Mm9::chr10:127165632..127165636,+#_2c26f2a1b8a3832f58fab5f27ea65d8bp@chr10:127165632..127165636, +
3.28e-58FFCP PHASE2:Mm9::chr5:31350252..31350259,-#_2c26f2a1b8a3832f58fab5f27ea65d8bp13@Slc5a6
3.28e-58FFCP PHASE1:Mm9::chr11:43412215..43412219,-#_2c26f2a1b8a3832f58fab5f27ea65d8bp@chr11:43412215..43412219, -
4.9e-53FFCP PHASE2:Mm9::chr1:174032230..174032242,+#_56b95b49e037e54c531ee79cd6cfc11ap@chr1:174032230..174032242, +
4.9e-53FFCP PHASE1:Mm9::chr1:174032230..174032242,+#_56b95b49e037e54c531ee79cd6cfc11ap@chr1:174032230..174032242, +
1.1e-52FFCP PHASE2:Mm9::chr1:123242799..123242804,-#_1063802031600e7dcc9b569cbca83497p@chr1:123242799..123242804, -
1.1e-52FFCP PHASE1:Mm9::chr1:123242799..123242804,-#_1063802031600e7dcc9b569cbca83497p@chr1:123242799..123242804, -
5.51e-52FFCP PHASE1:Mm9::chr6:48417827..48417837,+#_4d8fa0f8fc144b7a401678f52d48655ap@chr6:48417827..48417837, +
5.51e-52FFCP PHASE2:Mm9::chr6:48417827..48417837,+#_4d8fa0f8fc144b7a401678f52d48655ap@chr6:48417827..48417837, +
5.51e-52FFCP PHASE1:Mm9::chr9:7692339..7692366,+#_4d8fa0f8fc144b7a401678f52d48655ap@chr9:7692339..7692366, +
5.51e-52FFCP PHASE2:Mm9::chr9:7692339..7692366,+#_4d8fa0f8fc144b7a401678f52d48655ap@chr9:7692339..7692366, +
1.18e-44FFCP PHASE2:Mm9::chr1:174032263..174032278,+#_aa49c68dda190c0dcdcca4527a29cc54p@chr1:174032263..174032278, +
1.18e-44FFCP PHASE1:Mm9::chr1:174032263..174032278,+#_aa49c68dda190c0dcdcca4527a29cc54p@chr1:174032263..174032278, +
1.66e-44FFCP PHASE1:Mm9::chr11:76730372..76730376,+#_1fb9e16da24d5cba73909d5e4bb6bda3p@chr11:76730372..76730376, +
1.66e-44FFCP PHASE2:Mm9::chr11:76730372..76730376,+#_1fb9e16da24d5cba73909d5e4bb6bda3p@chr11:76730372..76730376, +
2.33e-44FFCP PHASE1:Mm9::chr3:65610528..65610533,+#_da265f75cb76beaafd6d42229b2c8646p@chr3:65610528..65610533, +
2.33e-44FFCP PHASE2:Mm9::chr19:6114448..6114456,+#_da265f75cb76beaafd6d42229b2c8646p@chr19:6114448..6114456, +
2.33e-44FFCP PHASE1:Mm9::chr19:6114448..6114456,+#_da265f75cb76beaafd6d42229b2c8646p@chr19:6114448..6114456, +
2.33e-44FFCP PHASE2:Mm9::chr3:65610528..65610533,+#_da265f75cb76beaafd6d42229b2c8646p@chr3:65610528..65610533, +
1.7e-39FFCP PHASE2:Mm9::chr3:6169801..6169806,-#_aad4392c0dd1938125dead0cad784e5ep@chr3:6169801..6169806, -
1.7e-39FFCP PHASE1:Mm9::chr3:6169801..6169806,-#_aad4392c0dd1938125dead0cad784e5ep@chr3:6169801..6169806, -
2.66e-39FFCP PHASE2:Mm9::chr19:6112940..6112946,+#_c3ded0ee8763d382f29a40af4ab4ab56p@chr19:6112940..6112946, +
2.66e-39FFCP PHASE1:Mm9::chr19:6112940..6112946,+#_c3ded0ee8763d382f29a40af4ab4ab56p@chr19:6112940..6112946, +
4.15e-39FFCP PHASE1:Mm9::chr5:31350231..31350240,-#_2b3dff19e728d3bfb1ed75f613a2f3cap12@Slc5a6
4.15e-39FFCP PHASE2:Mm9::chr5:31350231..31350240,-#_2b3dff19e728d3bfb1ed75f613a2f3cap12@Slc5a6
1.17e-38FFCP PHASE1:Mm9::chr11:43412071..43412093,+#_ca5fde3bc8832185e351ccd858747afbp@chr11:43412071..43412093, +
1.17e-38FFCP PHASE2:Mm9::chr11:43412071..43412093,+#_ca5fde3bc8832185e351ccd858747afbp@chr11:43412071..43412093, +
1.56e-38FFCP PHASE1:Mm9::chr3:103636485..103636490,+#_f1ec9f89efa74f22e5d30e89fb7ee7bep3@Bcl2l15
1.56e-38FFCP PHASE2:Mm9::chr3:103636485..103636490,+#_f1ec9f89efa74f22e5d30e89fb7ee7bep3@Bcl2l15
3.67e-34FFCP PHASE1:Mm9::chr11:43412170..43412191,+#_fa58b2e2d41221f9b92f835a6842a841p@chr11:43412170..43412191, +
3.67e-34FFCP PHASE2:Mm9::chr11:43412170..43412191,+#_fa58b2e2d41221f9b92f835a6842a841p@chr11:43412170..43412191, +
4.74e-34FFCP PHASE2:Mm9::chr11:43409580..43409591,+#_fb930ad7f24f90495fd6d42028fc426fp@chr11:43409580..43409591, +
4.74e-34FFCP PHASE1:Mm9::chr11:43409580..43409591,+#_fb930ad7f24f90495fd6d42028fc426fp@chr11:43409580..43409591, +
6.12e-34FFCP PHASE1:Mm9::chr6:40578587..40578594,+#_be83d4e8bcc0c7e67ddb9b3b72d959c4p4@Mgam
6.12e-34FFCP PHASE2:Mm9::chr6:40578587..40578594,+#_be83d4e8bcc0c7e67ddb9b3b72d959c4p4@Mgam
1.02e-33FFCP PHASE1:Mm9::chr2:72453221..72453226,-#_d70557e30810dde86b12ad12c9d34914p@chr2:72453221..72453226, -
1.02e-33FFCP PHASE2:Mm9::chr2:72453221..72453226,-#_d70557e30810dde86b12ad12c9d34914p@chr2:72453221..72453226, -
1.31e-33FFCP PHASE2:Mm9::chr6:78323455..78323458,-#_6bf994547c12a3e03a33d6472d9da99dp@chr6:78323455..78323458, -
1.31e-33FFCP PHASE1:Mm9::chr6:78323455..78323458,-#_6bf994547c12a3e03a33d6472d9da99dp@chr6:78323455..78323458, -
1.31e-33FFCP PHASE2:Mm9::chr19:6112924..6112937,+#_6bf994547c12a3e03a33d6472d9da99dp@chr19:6112924..6112937, +
1.31e-33FFCP PHASE1:Mm9::chr19:6112924..6112937,+#_6bf994547c12a3e03a33d6472d9da99dp@chr19:6112924..6112937, +
2.89e-30FFCP PHASE1:Mm9::chr4:138388796..138388811,+#_44acd2dcb48f5314d15670479de05fcfp3@ENSMUST00000147728
2.89e-30FFCP PHASE2:Mm9::chr4:138388796..138388811,+#_44acd2dcb48f5314d15670479de05fcfp3@ENSMUST00000147728
4.03e-30FFCP PHASE1:Mm9::chr10:128109355..128109365,-#_496c9eacf5e714c78b250ea563efb1cbp@chr10:128109355..128109365, -
4.03e-30FFCP PHASE2:Mm9::chr10:128109355..128109365,-#_496c9eacf5e714c78b250ea563efb1cbp@chr10:128109355..128109365, -
4.03e-30FFCP PHASE2:Mm9::chr17:34484746..34484750,+#_496c9eacf5e714c78b250ea563efb1cbp@chr17:34484746..34484750, +
4.03e-30FFCP PHASE1:Mm9::chr17:34484746..34484750,+#_496c9eacf5e714c78b250ea563efb1cbp@chr17:34484746..34484750, +
5.61e-30FFCP PHASE2:Mm9::chr1:40187318..40187321,-#_a1a53edd03506264a54fd571c0b6df81p@chr1:40187318..40187321, -
5.61e-30FFCP PHASE1:Mm9::chr10:31111154..31111155,+#_a1a53edd03506264a54fd571c0b6df81p@chr10:31111154..31111155, +
5.61e-30FFCP PHASE1:Mm9::chr11:106410939..106410940,+#_a1a53edd03506264a54fd571c0b6df81p@chr11:106410939..106410940, +
5.61e-30FFCP PHASE1:Mm9::chr13:55874724..55874725,-#_a1a53edd03506264a54fd571c0b6df81p@chr13:55874724..55874725, -
5.61e-30FFCP PHASE2:Mm9::chr11:106410939..106410940,+#_a1a53edd03506264a54fd571c0b6df81p@chr11:106410939..106410940, +
5.61e-30FFCP PHASE2:Mm9::chr10:31111154..31111155,+#_a1a53edd03506264a54fd571c0b6df81p@chr10:31111154..31111155, +
5.61e-30FFCP PHASE1:Mm9::chr3:20879214..20879216,+#_a1a53edd03506264a54fd571c0b6df81p@chr3:20879214..20879216, +
5.61e-30FFCP PHASE1:Mm9::chr18:58306021..58306022,+#_a1a53edd03506264a54fd571c0b6df81p@chr18:58306021..58306022, +
5.61e-30FFCP PHASE2:Mm9::chr13:55874724..55874725,-#_a1a53edd03506264a54fd571c0b6df81p@chr13:55874724..55874725, -
5.61e-30FFCP PHASE1:Mm9::chr11:27472982..27472983,+#_a1a53edd03506264a54fd571c0b6df81p@chr11:27472982..27472983, +
5.61e-30FFCP PHASE2:Mm9::chr8:5085607..5085611,-#_a1a53edd03506264a54fd571c0b6df81p@chr8:5085607..5085611, -
5.61e-30FFCP PHASE2:Mm9::chr9:50047835..50047836,+#_a1a53edd03506264a54fd571c0b6df81p@chr9:50047835..50047836, +
5.61e-30FFCP PHASE1:Mm9::chr11:9039303..9039304,+#_a1a53edd03506264a54fd571c0b6df81p@chr11:9039303..9039304, +
5.61e-30FFCP PHASE2:Mm9::chr11:27472982..27472983,+#_a1a53edd03506264a54fd571c0b6df81p@chr11:27472982..27472983, +
5.61e-30FFCP PHASE1:Mm9::chr8:5085607..5085611,-#_a1a53edd03506264a54fd571c0b6df81p@chr8:5085607..5085611, -
5.61e-30FFCP PHASE1:Mm9::chr17:4030939..4030944,-#_a1a53edd03506264a54fd571c0b6df81p@chr17:4030939..4030944, -
5.61e-30FFCP PHASE2:Mm9::chr8:27020687..27020691,+#_a1a53edd03506264a54fd571c0b6df81p@chr8:27020687..27020691, +
5.61e-30FFCP PHASE2:Mm9::chr18:55496010..55496011,-#_a1a53edd03506264a54fd571c0b6df81p@chr18:55496010..55496011, -
5.61e-30FFCP PHASE2:Mm9::chrX:83991903..83991905,-#_a1a53edd03506264a54fd571c0b6df81p@chrX:83991903..83991905, -
5.61e-30FFCP PHASE1:Mm9::chr13:17402712..17402716,+#_a1a53edd03506264a54fd571c0b6df81p@chr13:17402712..17402716, +
5.61e-30FFCP PHASE2:Mm9::chr13:17402712..17402716,+#_a1a53edd03506264a54fd571c0b6df81p@chr13:17402712..17402716, +
5.61e-30FFCP PHASE2:Mm9::chr12:103615373..103615374,+#_a1a53edd03506264a54fd571c0b6df81p@chr12:103615373..103615374, +
5.61e-30FFCP PHASE1:Mm9::chr8:27020687..27020691,+#_a1a53edd03506264a54fd571c0b6df81p@chr8:27020687..27020691, +
5.61e-30FFCP PHASE2:Mm9::chr11:9039303..9039304,+#_a1a53edd03506264a54fd571c0b6df81p@chr11:9039303..9039304, +
5.61e-30FFCP PHASE2:Mm9::chr17:4030939..4030944,-#_a1a53edd03506264a54fd571c0b6df81p@chr17:4030939..4030944, -
5.61e-30FFCP PHASE1:Mm9::chr12:103615373..103615374,+#_a1a53edd03506264a54fd571c0b6df81p@chr12:103615373..103615374, +
5.61e-30FFCP PHASE2:Mm9::chr18:58306021..58306022,+#_a1a53edd03506264a54fd571c0b6df81p@chr18:58306021..58306022, +
5.61e-30FFCP PHASE1:Mm9::chrX:68120720..68120723,-#_a1a53edd03506264a54fd571c0b6df81p@chrX:68120720..68120723, -
5.61e-30FFCP PHASE1:Mm9::chr4:72564746..72564750,-#_a1a53edd03506264a54fd571c0b6df81p@chr4:72564746..72564750, -
5.61e-30FFCP PHASE2:Mm9::chr3:20879214..20879216,+#_a1a53edd03506264a54fd571c0b6df81p@chr3:20879214..20879216, +
5.61e-30FFCP PHASE1:Mm9::chr18:55496010..55496011,-#_a1a53edd03506264a54fd571c0b6df81p@chr18:55496010..55496011, -
5.61e-30FFCP PHASE1:Mm9::chr17:43614030..43614038,+#_a1a53edd03506264a54fd571c0b6df81p@chr17:43614030..43614038, +
5.61e-30FFCP PHASE1:Mm9::chr1:40187318..40187321,-#_a1a53edd03506264a54fd571c0b6df81p@chr1:40187318..40187321, -
5.61e-30FFCP PHASE2:Mm9::chrX:68120720..68120723,-#_a1a53edd03506264a54fd571c0b6df81p@chrX:68120720..68120723, -
5.61e-30FFCP PHASE2:Mm9::chr4:72564746..72564750,-#_a1a53edd03506264a54fd571c0b6df81p@chr4:72564746..72564750, -
5.61e-30FFCP PHASE1:Mm9::chr9:50047835..50047836,+#_a1a53edd03506264a54fd571c0b6df81p@chr9:50047835..50047836, +
5.61e-30FFCP PHASE1:Mm9::chrX:83991903..83991905,-#_a1a53edd03506264a54fd571c0b6df81p@chrX:83991903..83991905, -
5.61e-30FFCP PHASE2:Mm9::chr17:43614030..43614038,+#_a1a53edd03506264a54fd571c0b6df81p@chr17:43614030..43614038, +

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