CL:0000798: Difference between revisions
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment=Note that gamma-delta T cells have both thymic and extrathymic differentiation pathways. | |comment=Note that gamma-delta T cells have both thymic and extrathymic differentiation pathways. | ||
|created_by= | |created_by= | ||
| | |def="A T cell that expresses a gamma-delta T cell receptor complex." [GOC:add, GOC:tfm, ISBN:0781735149] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0000798 | |||
|is_a=CL:0000084 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=gamma-delta T cell | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |preceded_by= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | |||
|subset= | |||
|synonym="gamma-delta T lymphocyte" EXACT [];;"gamma-delta T-cell" EXACT [];;"gamma-delta T-lymphocyte" EXACT [];;"gammadelta T cell" EXACT [];;"gd T cell" RELATED [] | |||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 16:37, 12 September 2014
| Name: | gamma-delta T cell |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A T cell that expresses a gamma-delta T cell receptor complex." [GOC:add, GOC:tfm, ISBN:0781735149] |
| Synonyms: |
"gamma-delta T lymphocyte" EXACT [] "gamma-delta T-cell" EXACT [] "gamma-delta T-lymphocyte" EXACT [] "gammadelta T cell" EXACT [] "gd T cell" RELATED [] |
| Comments: | Note that gamma-delta T cells have both thymic and extrathymic differentiation pathways. |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000084(T cell) |
|---|
Children
| disjoint from: | CL:0000789 (alpha-beta T cell) |
|---|---|
| derives from: | FF:0200022 (gamma delta positive T cells sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11937-126A2 (gamma delta positive T cells, donor1)
- 11938-126A3 (gamma delta positive T cells, donor2)
Mouse (Mus musculus)
- 11937-126A2 (gamma delta positive T cells, donor1)
- 11938-126A3 (gamma delta positive T cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000798 (gamma-delta T cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results for this cluster
