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{{UBERON
{{UBERON
|id=UBERON:0005058
|alt_id=
|name=hemolymphoid system gland
|namespace=
|def="A gland that is part of a hemolymphoid system [Obol]." [OBOL:automatic]
|xref=MA:0002962
|is_a=UBERON:0002530
|synonym="hemopoietic or lymphoid gland" EXACT [GOC:cjm];;"hemopoietic or lymphoid organ" BROAD [GO:0048534]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A gland that is part of a hemolymphoid system [Obol]." [OBOL:automatic]
|subset=organ_slim
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005058
|is_a=UBERON:0002530
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=hemolymphoid system gland
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0002193
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=organ_slim
|preceded_by=
|synonym="hemopoietic or lymphoid gland" EXACT [GOC:cjm];;"hemopoietic or lymphoid organ" BROAD [GO:0048534]
|union_of=
|xref=MA:0002962
}}
}}

Latest revision as of 17:50, 12 September 2014

Name:hemolymphoid system gland
Namespace:FANTOM
Definition:"A gland that is part of a hemolymphoid system [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0002962
Synonyms: "hemopoietic or lymphoid gland" EXACT [GOC:cjm]
"hemopoietic or lymphoid organ" BROAD [GO:0048534]
Subset: organ_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002530(gland)
part_of:UBERON:0002193(hemolymphoid system)



Children

is a:UBERON:0002370 (thymus)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005058 (hemolymphoid system gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
6.94e-147FFCP PHASE2:Hg19::chr14:22928012..22928031,+#_2fafe12d5955e0f99ce9675a3e3ad83ap3@uc001wea.3, p3@uc010ajt.2, p3@uc010aju.1
6.94e-147FFCP PHASE1:Hg19::chr14:22928012..22928031,+#_2fafe12d5955e0f99ce9675a3e3ad83ap3@uc001wea.3, p3@uc010ajt.2, p3@uc010aju.1
8.91e-111FFCP PHASE1:Hg19::chr14:22927984..22927999,+#_5ea0ea41ddfce9a43c586fcd229cc842p4@uc001wea.3, p4@uc010ajt.2, p4@uc010aju.1
8.91e-111FFCP PHASE2:Hg19::chr14:22927984..22927999,+#_5ea0ea41ddfce9a43c586fcd229cc842p4@uc001wea.3, p4@uc010ajt.2, p4@uc010aju.1
1.55e-98FFCP PHASE1:Hg19::chr2:87018900..87018905,+#_f047039d0f8f05607ffd543243563187p@chr2:87018900..87018905, +
1.55e-98FFCP PHASE1:Hg19::chr15:58069758..58069762,+#_f047039d0f8f05607ffd543243563187p@chr15:58069758..58069762, +
1.55e-98FFCP PHASE1:Hg19::chr11:36622593..36622605,+#_f047039d0f8f05607ffd543243563187p@chr11:36622593..36622605, +
1.55e-98FFCP PHASE1:Hg19::chr12:123636839..123636885,-#_f047039d0f8f05607ffd543243563187p@chr12:123636839..123636885, -
1.55e-98FFCP PHASE1:Hg19::chr1:158259849..158259854,+#_f047039d0f8f05607ffd543243563187p11@CD1C
1.55e-98FFCP PHASE1:Hg19::chr1:200500161..200500173,-#_f047039d0f8f05607ffd543243563187p@chr1:200500161..200500173, -
1.55e-98FFCP PHASE1:Hg19::chr1:204494413..204494420,+#_f047039d0f8f05607ffd543243563187p17@MDM4
1.55e-98FFCP PHASE1:Hg19::chr11:6953654..6953661,+#_f047039d0f8f05607ffd543243563187p5@ZNF215
1.55e-98FFCP PHASE1:Hg19::chr2:227771357..227771363,+#_f047039d0f8f05607ffd543243563187p10@RHBDD1
1.55e-98FFCP PHASE1:Hg19::chr10:11486829..11486836,+#_f047039d0f8f05607ffd543243563187p@chr10:11486829..11486836, +
1.55e-98FFCP PHASE1:Hg19::chr2:233184654..233184661,-#_f047039d0f8f05607ffd543243563187p@chr2:233184654..233184661, -
1.55e-98FFCP PHASE1:Hg19::chr10:11486877..11486886,+#_f047039d0f8f05607ffd543243563187p@chr10:11486877..11486886, +
1.55e-98FFCP PHASE1:Hg19::chr10:115022988..115023001,+#_f047039d0f8f05607ffd543243563187p@chr10:115022988..115023001, +
1.55e-98FFCP PHASE1:Hg19::chr10:115023005..115023015,+#_f047039d0f8f05607ffd543243563187p@chr10:115023005..115023015, +
1.55e-98FFCP PHASE1:Hg19::chr15:60131355..60131365,-#_f047039d0f8f05607ffd543243563187p@chr15:60131355..60131365, -
1.55e-98FFCP PHASE1:Hg19::chr16:74359040..74359071,+#_f047039d0f8f05607ffd543243563187p@chr16:74359040..74359071, +
1.55e-98FFCP PHASE1:Hg19::chr10:115023055..115023072,+#_f047039d0f8f05607ffd543243563187p@chr10:115023055..115023072, +
1.55e-98FFCP PHASE1:Hg19::chr10:115023094..115023106,+#_f047039d0f8f05607ffd543243563187p@chr10:115023094..115023106, +
1.55e-98FFCP PHASE1:Hg19::chr17:76274572..76274581,-#_f047039d0f8f05607ffd543243563187p4@ENST00000374945
1.55e-98FFCP PHASE1:Hg19::chr12:48227243..48227269,+#_f047039d0f8f05607ffd543243563187p@chr12:48227243..48227269, +
1.55e-98FFCP PHASE1:Hg19::chr3:155273127..155273136,-#_f047039d0f8f05607ffd543243563187p4@AK093601
1.55e-98FFCP PHASE1:Hg19::chr12:123634449..123634460,-#_f047039d0f8f05607ffd543243563187p25@PITPNM2
1.55e-98FFCP PHASE1:Hg19::chr2:87018380..87018390,-#_f047039d0f8f05607ffd543243563187p6@CD8A
1.55e-98FFCP PHASE1:Hg19::chr3:34517538..34517551,+#_f047039d0f8f05607ffd543243563187p@chr3:34517538..34517551, +
1.55e-98FFCP PHASE1:Hg19::chr11:36589389..36589398,-#_f047039d0f8f05607ffd543243563187p@chr11:36589389..36589398, -
1.55e-98FFCP PHASE1:Hg19::chr17:80866179..80866188,+#_f047039d0f8f05607ffd543243563187p@chr17:80866179..80866188, +
1.55e-98FFCP PHASE1:Hg19::chr1:204507243..204507252,+#_f047039d0f8f05607ffd543243563187p19@MDM4
1.55e-98FFCP PHASE1:Hg19::chr15:56940722..56940731,+#_f047039d0f8f05607ffd543243563187p@chr15:56940722..56940731, +
1.55e-98FFCP PHASE1:Hg19::chr15:58069384..58069408,+#_f047039d0f8f05607ffd543243563187p@chr15:58069384..58069408, +
1.55e-98FFCP PHASE1:Hg19::chr1:158226030..158226041,+#_f047039d0f8f05607ffd543243563187p@chr1:158226030..158226041, +
1.55e-98FFCP PHASE1:Hg19::chr3:35683004..35683015,+#_f047039d0f8f05607ffd543243563187p42@ARPP21
1.55e-98FFCP PHASE1:Hg19::chr1:204494427..204494436,+#_f047039d0f8f05607ffd543243563187p15@MDM4
1.55e-98FFCP PHASE1:Hg19::chr1:2084380..2084413,-#_f047039d0f8f05607ffd543243563187p@chr1:2084380..2084413, -
1.55e-98FFCP PHASE1:Hg19::chr1:158170478..158170491,-#_f047039d0f8f05607ffd543243563187p@chr1:158170478..158170491, -
1.55e-98FFCP PHASE1:Hg19::chr12:133414662..133414671,-#_f047039d0f8f05607ffd543243563187p@chr12:133414662..133414671, -
1.55e-98FFCP PHASE1:Hg19::chr20:58830826..58830835,+#_f047039d0f8f05607ffd543243563187p@chr20:58830826..58830835, +
1.55e-98FFCP PHASE1:Hg19::chr2:233102726..233102734,+#_f047039d0f8f05607ffd543243563187p@chr2:233102726..233102734, +
1.55e-98FFCP PHASE1:Hg19::chr15:57017749..57017755,-#_f047039d0f8f05607ffd543243563187p@chr15:57017749..57017755, -
1.55e-98FFCP PHASE1:Hg19::chr1:44035233..44035242,+#_f047039d0f8f05607ffd543243563187p@chr1:44035233..44035242, +
1.55e-98FFCP PHASE1:Hg19::chr10:26726728..26726731,+#_f047039d0f8f05607ffd543243563187p17@APBB1IP
1.55e-98FFCP PHASE1:Hg19::chr20:30272266..30272271,-#_f047039d0f8f05607ffd543243563187p@chr20:30272266..30272271, -
1.55e-98FFCP PHASE1:Hg19::chr20:58830799..58830808,+#_f047039d0f8f05607ffd543243563187p@chr20:58830799..58830808, +
1.55e-98FFCP PHASE1:Hg19::chr18:13437980..13437986,+#_f047039d0f8f05607ffd543243563187p@chr18:13437980..13437986, +
1.55e-98FFCP PHASE1:Hg19::chr12:47205180..47205187,+#_f047039d0f8f05607ffd543243563187p@chr12:47205180..47205187, +
1.55e-98FFCP PHASE1:Hg19::chr2:87017428..87017437,+#_f047039d0f8f05607ffd543243563187p@chr2:87017428..87017437, +
1.55e-98FFCP PHASE1:Hg19::chr2:57846504..57846542,+#_f047039d0f8f05607ffd543243563187p@chr2:57846504..57846542, +
1.55e-98FFCP PHASE1:Hg19::chr12:123607146..123607168,-#_f047039d0f8f05607ffd543243563187p@chr12:123607146..123607168, -
1.55e-98FFCP PHASE1:Hg19::chr1:199026759..199026762,+#_f047039d0f8f05607ffd543243563187p@chr1:199026759..199026762, +
1.55e-98FFCP PHASE1:Hg19::chr1:158332631..158332640,+#_f047039d0f8f05607ffd543243563187p@chr1:158332631..158332640, +
1.55e-98FFCP PHASE1:Hg19::chr13:99628369..99628374,-#_f047039d0f8f05607ffd543243563187p@chr13:99628369..99628374, -
1.55e-98FFCP PHASE1:Hg19::chr3:34517741..34517784,+#_f047039d0f8f05607ffd543243563187p@chr3:34517741..34517784, +
1.55e-98FFCP PHASE1:Hg19::chr12:123559773..123559784,-#_f047039d0f8f05607ffd543243563187p@chr12:123559773..123559784, -
1.55e-98FFCP PHASE1:Hg19::chr1:158260453..158260459,-#_f047039d0f8f05607ffd543243563187p@chr1:158260453..158260459, -
1.55e-98FFCP PHASE1:Hg19::chr15:60131313..60131324,-#_f047039d0f8f05607ffd543243563187p@chr15:60131313..60131324, -
1.55e-98FFCP PHASE1:Hg19::chr12:123559708..123559720,-#_f047039d0f8f05607ffd543243563187p@chr12:123559708..123559720, -
1.55e-98FFCP PHASE1:Hg19::chr15:99071828..99071840,+#_f047039d0f8f05607ffd543243563187p@chr15:99071828..99071840, +
1.55e-98FFCP PHASE1:Hg19::chr1:160643269..160643276,+#_f047039d0f8f05607ffd543243563187p5@ENST00000443928
1.55e-98FFCP PHASE1:Hg19::chr12:59432175..59432191,+#_f047039d0f8f05607ffd543243563187p@chr12:59432175..59432191, +
1.55e-98FFCP PHASE1:Hg19::chr1:158260649..158260652,+#_f047039d0f8f05607ffd543243563187p13@CD1C
1.55e-98FFCP PHASE1:Hg19::chr15:60131337..60131352,-#_f047039d0f8f05607ffd543243563187p@chr15:60131337..60131352, -
1.55e-98FFCP PHASE1:Hg19::chr14:98229095..98229108,-#_f047039d0f8f05607ffd543243563187p1@ENST00000555187
1.55e-98FFCP PHASE1:Hg19::chr15:56940732..56940741,+#_f047039d0f8f05607ffd543243563187p@chr15:56940732..56940741, +
1.55e-98FFCP PHASE1:Hg19::chr14:22942319..22942322,+#_f047039d0f8f05607ffd543243563187p4@uc001wec.2
1.55e-98FFCP PHASE1:Hg19::chr3:19007717..19007728,+#_f047039d0f8f05607ffd543243563187p@chr3:19007717..19007728, +
1.55e-98FFCP PHASE1:Hg19::chr13:99628347..99628352,-#_f047039d0f8f05607ffd543243563187p@chr13:99628347..99628352, -
1.55e-98FFCP PHASE1:Hg19::chr2:57926329..57926337,-#_f047039d0f8f05607ffd543243563187p@chr2:57926329..57926337, -
1.55e-98FFCP PHASE1:Hg19::chr3:35682974..35682982,+#_f047039d0f8f05607ffd543243563187p45@ARPP21
1.55e-98FFCP PHASE1:Hg19::chr1:44035057..44035068,+#_f047039d0f8f05607ffd543243563187p@chr1:44035057..44035068, +
1.55e-98FFCP PHASE1:Hg19::chr2:242080265..242080277,-#_f047039d0f8f05607ffd543243563187p20@PASK
1.55e-98FFCP PHASE1:Hg19::chr17:4090402..4090406,-#_f047039d0f8f05607ffd543243563187p@chr17:4090402..4090406, -
1.55e-98FFCP PHASE1:Hg19::chr15:58920068..58920073,-#_f047039d0f8f05607ffd543243563187p@chr15:58920068..58920073, -
1.55e-98FFCP PHASE1:Hg19::chr2:227771044..227771054,+#_f047039d0f8f05607ffd543243563187p9@RHBDD1
1.55e-98FFCP PHASE1:Hg19::chr12:123560793..123560802,+#_f047039d0f8f05607ffd543243563187p@chr12:123560793..123560802, +
1.55e-98FFCP PHASE1:Hg19::chr13:99628323..99628332,-#_f047039d0f8f05607ffd543243563187p@chr13:99628323..99628332, -
1.55e-98FFCP PHASE1:Hg19::chr12:123560608..123560615,-#_f047039d0f8f05607ffd543243563187p24@PITPNM2
1.55e-98FFCP PHASE1:Hg19::chr12:133413547..133413557,-#_f047039d0f8f05607ffd543243563187p13@POLE
1.55e-98FFCP PHASE1:Hg19::chr1:55776022..55776029,-#_f047039d0f8f05607ffd543243563187p@chr1:55776022..55776029, -
1.55e-98FFCP PHASE1:Hg19::chr12:123627753..123627760,+#_f047039d0f8f05607ffd543243563187p@chr12:123627753..123627760, +
1.55e-98FFCP PHASE1:Hg19::chr17:76274646..76274658,-#_f047039d0f8f05607ffd543243563187p2@ENST00000374945
1.55e-98FFCP PHASE1:Hg19::chr2:162762361..162762364,+#_f047039d0f8f05607ffd543243563187p@chr2:162762361..162762364, +
1.55e-98FFCP PHASE1:Hg19::chr20:58830811..58830825,+#_f047039d0f8f05607ffd543243563187p@chr20:58830811..58830825, +
1.55e-98FFCP PHASE1:Hg19::chr15:58069582..58069594,+#_f047039d0f8f05607ffd543243563187p@chr15:58069582..58069594, +
1.55e-98FFCP PHASE1:Hg19::chr10:72542272..72542281,-#_f047039d0f8f05607ffd543243563187p6@C10orf27
1.55e-98FFCP PHASE1:Hg19::chr1:158301280..158301298,+#_f047039d0f8f05607ffd543243563187p@chr1:158301280..158301298, +
1.55e-98FFCP PHASE1:Hg19::chr20:58833004..58833011,+#_f047039d0f8f05607ffd543243563187p@chr20:58833004..58833011, +
1.55e-98FFCP PHASE1:Hg19::chr13:99628388..99628399,-#_f047039d0f8f05607ffd543243563187p@chr13:99628388..99628399, -
1.55e-98FFCP PHASE1:Hg19::chr16:49633750..49633778,-#_f047039d0f8f05607ffd543243563187p@chr16:49633750..49633778, -
1.55e-98FFCP PHASE1:Hg19::chr12:48225126..48225164,+#_f047039d0f8f05607ffd543243563187p1@ENST00000548564, p1@ENST00000550720, p1@ENST00000550909
1.55e-98FFCP PHASE1:Hg19::chr1:194245598..194245600,-#_f047039d0f8f05607ffd543243563187p@chr1:194245598..194245600, -
1.55e-98FFCP PHASE1:Hg19::chr1:160643289..160643296,+#_f047039d0f8f05607ffd543243563187p4@ENST00000443928
1.55e-98FFCP PHASE1:Hg19::chr15:58069597..58069604,+#_f047039d0f8f05607ffd543243563187p@chr15:58069597..58069604, +
1.55e-98FFCP PHASE1:Hg19::chr1:158303678..158303720,-#_f047039d0f8f05607ffd543243563187p@chr1:158303678..158303720, -
1.55e-98FFCP PHASE1:Hg19::chr1:55776031..55776038,-#_f047039d0f8f05607ffd543243563187p@chr1:55776031..55776038, -
1.55e-98FFCP PHASE1:Hg19::chr19:28877072..28877084,-#_f047039d0f8f05607ffd543243563187p@chr19:28877072..28877084, -
1.55e-98FFCP PHASE1:Hg19::chr1:32314477..32314482,+#_f047039d0f8f05607ffd543243563187p@chr1:32314477..32314482, +
1.55e-98FFCP PHASE1:Hg19::chr11:8954087..8954092,-#_f047039d0f8f05607ffd543243563187p1@AB527792

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