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{{UBERON
{{UBERON
|id=UBERON:0006555
|alt_id=
|name=excretory tube
|namespace=
|def=
|xref=
|is_a=UBERON:0000025;;UBERON:0006554
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0006555
|is_a=UBERON:0000025 ;;UBERON:0006554
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=excretory tube
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001008
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 17:57, 12 September 2014

Name:excretory tube
Namespace:FANTOM

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000025(tube),UBERON:0006554(urinary system structure)
part_of:UBERON:0001008(renal system)



Children

is a:UBERON:0000056 (ureter),UBERON:0000083 (mesonephric tubule),UBERON:0006553 (renal duct),UBERON:0007684 (uriniferous tubule),UBERON:0009773 (renal tubule),UBERON:0010532 (primitive nephron)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006555 (excretory tube), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
7.12e-98FFCP PHASE2:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4p@chr2:693380..693398, +
7.12e-98FFCP PHASE1:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4p@chr2:693380..693398, +
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110p4@Spink12
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110p4@Spink12
2.81e-78FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98cap4@MEGF11
2.81e-78FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98cap4@MEGF11
1.04e-71FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cdp4@PAX2
1.04e-71FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cdp4@PAX2
1.28e-69FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5p7@HOXA10
1.28e-69FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5p7@HOXA10
4.01e-67FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394p3@PAX2
4.01e-67FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394p3@PAX2
1.1e-61FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448p@chr1:1100457..1100470, +
1.1e-61FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448p@chr1:1100457..1100470, +
3.28e-58FFCP PHASE2:Mm9::chr7:75293847..75293851,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr7:75293847..75293851, +
3.28e-58FFCP PHASE2:Mm9::chr4:123977104..123977120,-#_84c76bf0c1e0476c0a3dd256f65943d6p1@ENSMUST00000139012, p1@uc008uqo.1
3.28e-58FFCP PHASE1:Mm9::chr19:17585885..17585901,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr19:17585885..17585901, -
3.28e-58FFCP PHASE1:Mm9::chr14:52542711..52542716,-#_84c76bf0c1e0476c0a3dd256f65943d6p2@Rnase13
3.28e-58FFCP PHASE2:Mm9::chr6:49817766..49817772,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr6:49817766..49817772, -
3.28e-58FFCP PHASE2:Mm9::chr13:21378927..21378932,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21378927..21378932, -
3.28e-58FFCP PHASE1:Mm9::chr13:21385325..21385329,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21385325..21385329, -
3.28e-58FFCP PHASE2:Mm9::chr16:23308115..23308126,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr16:23308115..23308126, +
3.28e-58FFCP PHASE1:Mm9::chr1:90368977..90368987,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:90368977..90368987, +
3.28e-58FFCP PHASE1:Mm9::chr14:66521865..66521876,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr14:66521865..66521876, +
3.28e-58FFCP PHASE2:Mm9::chr15:54678983..54678995,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr15:54678983..54678995, -
3.28e-58FFCP PHASE2:Mm9::chr4:138824620..138824627,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr4:138824620..138824627, +
3.28e-58FFCP PHASE2:Mm9::chr14:63611201..63611210,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr14:63611201..63611210, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379550..31379559,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:31379550..31379559, +
3.28e-58FFCP PHASE1:Mm9::chr8:25706083..25706089,-#_84c76bf0c1e0476c0a3dd256f65943d6p4@Ido1
3.28e-58FFCP PHASE1:Mm9::chr7:56772735..56772741,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr7:56772735..56772741, +
3.28e-58FFCP PHASE1:Mm9::chr18:44264128..44264135,+#_84c76bf0c1e0476c0a3dd256f65943d6p5@Spink12
3.28e-58FFCP PHASE2:Mm9::chrX:75798114..75798125,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:75798114..75798125, -
3.28e-58FFCP PHASE2:Mm9::chr2:25677632..25677636,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr2:25677632..25677636, -
3.28e-58FFCP PHASE2:Mm9::chr2:164499572..164499580,-#_84c76bf0c1e0476c0a3dd256f65943d6p2@Wfdc11
3.28e-58FFCP PHASE1:Mm9::chr9:35715997..35716008,+#_84c76bf0c1e0476c0a3dd256f65943d6p1@9230113P08Rik
3.28e-58FFCP PHASE1:Mm9::chr13:21379098..21379104,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21379098..21379104, -
3.28e-58FFCP PHASE2:Mm9::chr5:124447371..124447383,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:124447371..124447383, +
3.28e-58FFCP PHASE1:Mm9::chr8:126604677..126604701,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr8:126604677..126604701, -
3.28e-58FFCP PHASE1:Mm9::chr3:103650817..103650825,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr3:103650817..103650825, +
3.28e-58FFCP PHASE1:Mm9::chr12:103896102..103896116,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr12:103896102..103896116, -
3.28e-58FFCP PHASE1:Mm9::chr11:101959159..101959163,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:101959159..101959163, +
3.28e-58FFCP PHASE2:Mm9::chrX:20219008..20219045,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:20219008..20219045, +
3.28e-58FFCP PHASE2:Mm9::chr11:53938008..53938022,+#_84c76bf0c1e0476c0a3dd256f65943d6p11@P4ha2
3.28e-58FFCP PHASE2:Mm9::chr4:106731469..106731481,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr4:106731469..106731481, -
3.28e-58FFCP PHASE2:Mm9::chr14:51677155..51677162,-#_84c76bf0c1e0476c0a3dd256f65943d6p5@Rnase12
3.28e-58FFCP PHASE1:Mm9::chr5:88272459..88272484,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:88272459..88272484, -
3.28e-58FFCP PHASE1:Mm9::chr16:22504758..22504766,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr16:22504758..22504766, -
3.28e-58FFCP PHASE2:Mm9::chr13:21381141..21381155,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21381141..21381155, -
3.28e-58FFCP PHASE2:Mm9::chr2:167688595..167688624,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr2:167688595..167688624, +
3.28e-58FFCP PHASE2:Mm9::chr5:31377177..31377184,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:31377177..31377184, +
3.28e-58FFCP PHASE1:Mm9::chr8:22061771..22061777,-#_84c76bf0c1e0476c0a3dd256f65943d6p3@Gm6040, p3@LOC100503992
3.28e-58FFCP PHASE1:Mm9::chr12:16663110..16663116,+#_84c76bf0c1e0476c0a3dd256f65943d6p3@Ntsr2
3.28e-58FFCP PHASE2:Mm9::chr19:24582739..24582748,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr19:24582739..24582748, -
3.28e-58FFCP PHASE2:Mm9::chr8:19142604..19142612,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr8:19142604..19142612, +
3.28e-58FFCP PHASE2:Mm9::chrX:156829476..156829504,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:156829476..156829504, +
3.28e-58FFCP PHASE2:Mm9::chr1:39707572..39707583,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:39707572..39707583, +
3.28e-58FFCP PHASE1:Mm9::chrX:156776465..156776473,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:156776465..156776473, -
3.28e-58FFCP PHASE1:Mm9::chr9:35651650..35651673,-#_84c76bf0c1e0476c0a3dd256f65943d6p4@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr6:54359310..54359337,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr6:54359310..54359337, -
3.28e-58FFCP PHASE1:Mm9::chr2:164434157..164434162,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr2:164434157..164434162, -
3.28e-58FFCP PHASE2:Mm9::chr9:56469136..56469145,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr9:56469136..56469145, -
3.28e-58FFCP PHASE2:Mm9::chr8:25706074..25706082,-#_84c76bf0c1e0476c0a3dd256f65943d6p3@Ido1
3.28e-58FFCP PHASE2:Mm9::chr15:83143938..83143953,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr15:83143938..83143953, -
3.28e-58FFCP PHASE2:Mm9::chr1:155698178..155698191,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:155698178..155698191, -
3.28e-58FFCP PHASE1:Mm9::chrX:50280199..50280211,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:50280199..50280211, +
3.28e-58FFCP PHASE1:Mm9::chr2:148676901..148676906,-#_84c76bf0c1e0476c0a3dd256f65943d6p8@9230104L09Rik
3.28e-58FFCP PHASE1:Mm9::chr11:96150839..96150842,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:96150839..96150842, -
3.28e-58FFCP PHASE2:Mm9::chr5:112721323..112721328,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:112721323..112721328, +
3.28e-58FFCP PHASE2:Mm9::chr14:51670340..51670346,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr14:51670340..51670346, -
3.28e-58FFCP PHASE1:Mm9::chr14:63611303..63611312,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr14:63611303..63611312, +
3.28e-58FFCP PHASE2:Mm9::chr9:35651679..35651691,-#_84c76bf0c1e0476c0a3dd256f65943d6p5@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr8:19141482..19141496,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr8:19141482..19141496, +
3.28e-58FFCP PHASE1:Mm9::chr3:65253465..65253475,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr3:65253465..65253475, +
3.28e-58FFCP PHASE1:Mm9::chr12:110131610..110131621,-#_84c76bf0c1e0476c0a3dd256f65943d6p11@Wars
3.28e-58FFCP PHASE2:Mm9::chr8:126604677..126604701,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr8:126604677..126604701, -
3.28e-58FFCP PHASE2:Mm9::chr9:26730625..26730636,-#_84c76bf0c1e0476c0a3dd256f65943d6p3@Gm1110
3.28e-58FFCP PHASE2:Mm9::chr2:25348986..25348999,-#_84c76bf0c1e0476c0a3dd256f65943d6p4@Lcn12
3.28e-58FFCP PHASE2:Mm9::chr2:164434346..164434353,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr2:164434346..164434353, -
3.28e-58FFCP PHASE2:Mm9::chr1:90155707..90155720,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:90155707..90155720, +
3.28e-58FFCP PHASE2:Mm9::chr5:88272459..88272484,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:88272459..88272484, -
3.28e-58FFCP PHASE1:Mm9::chr8:91107095..91107103,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr8:91107095..91107103, +
3.28e-58FFCP PHASE1:Mm9::chr9:42151966..42151976,-#_84c76bf0c1e0476c0a3dd256f65943d6p9@Tecta
3.28e-58FFCP PHASE1:Mm9::chr5:35930706..35930717,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:35930706..35930717, +
3.28e-58FFCP PHASE1:Mm9::chr13:21379430..21379437,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21379430..21379437, -
3.28e-58FFCP PHASE2:Mm9::chr13:21379098..21379104,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21379098..21379104, -
3.28e-58FFCP PHASE1:Mm9::chr13:23683348..23683398,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:23683348..23683398, +
3.28e-58FFCP PHASE2:Mm9::chr1:87936238..87936249,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:87936238..87936249, +
3.28e-58FFCP PHASE1:Mm9::chr5:110773731..110773753,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:110773731..110773753, +
3.28e-58FFCP PHASE1:Mm9::chr2:158083973..158083982,+#_84c76bf0c1e0476c0a3dd256f65943d6p3@Bpi
3.28e-58FFCP PHASE1:Mm9::chr16:28323634..28323657,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr16:28323634..28323657, -
3.28e-58FFCP PHASE2:Mm9::chr1:89596972..89596981,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:89596972..89596981, +
3.28e-58FFCP PHASE2:Mm9::chr2:148625223..148625234,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr2:148625223..148625234, +
3.28e-58FFCP PHASE1:Mm9::chr18:44319583..44319592,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr18:44319583..44319592, -
3.28e-58FFCP PHASE2:Mm9::chr8:23057222..23057234,+#_84c76bf0c1e0476c0a3dd256f65943d6p1@Defb13
3.28e-58FFCP PHASE2:Mm9::chr5:110773718..110773729,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:110773718..110773729, +
3.28e-58FFCP PHASE2:Mm9::chr11:116901496..116901514,-#_84c76bf0c1e0476c0a3dd256f65943d6p1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1
3.28e-58FFCP PHASE1:Mm9::chr8:113585714..113585722,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr8:113585714..113585722, -
3.28e-58FFCP PHASE2:Mm9::chr5:100634942..100634968,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:100634942..100634968, +
3.28e-58FFCP PHASE2:Mm9::chr2:152302813..152302821,+#_84c76bf0c1e0476c0a3dd256f65943d6p3@Defb20
3.28e-58FFCP PHASE1:Mm9::chrX:75798157..75798162,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:75798157..75798162, -