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{{UBERON
{{UBERON
|id=UBERON:0007689
|alt_id=
|name=thyroid diverticulum
|namespace=
|def="endodermal bud derived from the endodermal epithelium of the embryonic pharyngeal floor[MP]. The thyroid diverticulum is the embryological structure from which thyroid follicular cells derive. It grows from the floor of the pharnyx[WP]." [MP:0004662, Wikipedia:Thyroid_diverticulum]
|xref=
|is_a=UBERON:0001048
|synonym="saccus thyroideus; diverticulum thyroideum" RELATED LATIN [Wikipedia:Thyroid_diverticulum]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="endodermal bud derived from the endodermal epithelium of the embryonic pharyngeal floor[MP]. The thyroid diverticulum is the embryological structure from which thyroid follicular cells derive. It grows from the floor of the pharnyx[WP]." [MP:0004662, Wikipedia:Thyroid_diverticulum]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=UBERON:0003091
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0007689
|is_a=UBERON:0001048
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=thyroid diverticulum
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001042
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="saccus thyroideus; diverticulum thyroideum" RELATED LATIN [Wikipedia:Thyroid_diverticulum]
|union_of=
|xref=
}}
}}

Latest revision as of 18:02, 12 September 2014

Name:thyroid diverticulum
Namespace:FANTOM
Definition:"endodermal bud derived from the endodermal epithelium of the embryonic pharyngeal floor[MP]. The thyroid diverticulum is the embryological structure from which thyroid follicular cells derive. It grows from the floor of the pharnyx[WP]." [MP:0004662, Wikipedia:Thyroid_diverticulum]
Synonyms: "saccus thyroideus; diverticulum thyroideum" RELATED LATIN [Wikipedia:Thyroid_diverticulum]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001048(primordium)
develops_from:UBERON:0003091(thyroid primordium)
part_of:UBERON:0001042(chordate pharynx)



Children

develops from:UBERON:0002046 (thyroid gland)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007689 (thyroid diverticulum), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
7.76e-118FFCP PHASE1:Hg19::chr8:11333461..11333472,-#_9a7c52fe70dc1caa9edad7c9996d669fp@chr8:11333461..11333472, -
7.76e-118FFCP PHASE2:Hg19::chr8:11333461..11333472,-#_9a7c52fe70dc1caa9edad7c9996d669fp@chr8:11333461..11333472, -
6.64e-89FFCP PHASE2:Hg19::chr8:11333445..11333459,-#_6d68b566d5999a873523bebb39669f7ep@chr8:11333445..11333459, -
6.64e-89FFCP PHASE1:Hg19::chr8:11333445..11333459,-#_6d68b566d5999a873523bebb39669f7ep@chr8:11333445..11333459, -
3.18e-79FFCP PHASE1:Hg19::chr14:36645825..36645840,-#_4b29270219f20913916b03293a89c411p5@ENST00000556013
3.18e-79FFCP PHASE2:Hg19::chr14:36645825..36645840,-#_4b29270219f20913916b03293a89c411p5@ENST00000556013
3.49e-79FFCP PHASE1:Hg19::chr8:133895164..133895167,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133895164..133895167, +
3.49e-79FFCP PHASE2:Hg19::chr8:133898734..133898737,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133898734..133898737, +
3.49e-79FFCP PHASE2:Hg19::chr8:133898957..133898963,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:133898957..133898963, -
3.49e-79FFCP PHASE1:Hg19::chr8:134145709..134145716,+#_d90ed905d567e34e878a0d4b0da24122p18@TG
3.49e-79FFCP PHASE2:Hg19::chr2:1459933..1459941,+#_d90ed905d567e34e878a0d4b0da24122p@chr2:1459933..1459941, +
3.49e-79FFCP PHASE1:Hg19::chr2:1426850..1426859,+#_d90ed905d567e34e878a0d4b0da24122p10@TPO
3.49e-79FFCP PHASE2:Hg19::chr8:133900307..133900325,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:133900307..133900325, -
3.49e-79FFCP PHASE2:Hg19::chr2:1440068..1440076,+#_d90ed905d567e34e878a0d4b0da24122p@chr2:1440068..1440076, +
3.49e-79FFCP PHASE1:Hg19::chr14:21560489..21560506,-#_d90ed905d567e34e878a0d4b0da24122p@chr14:21560489..21560506, -
3.49e-79FFCP PHASE2:Hg19::chr14:81421428..81421431,+#_d90ed905d567e34e878a0d4b0da24122p11@TSHR
3.49e-79FFCP PHASE2:Hg19::chr8:133885414..133885420,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:133885414..133885420, -
3.49e-79FFCP PHASE1:Hg19::chr14:67998625..67998628,-#_d90ed905d567e34e878a0d4b0da24122p@chr14:67998625..67998628, -
3.49e-79FFCP PHASE1:Hg19::chr8:133898734..133898737,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133898734..133898737, +
3.49e-79FFCP PHASE1:Hg19::chr8:133981694..133981700,+#_d90ed905d567e34e878a0d4b0da24122p35@TG
3.49e-79FFCP PHASE1:Hg19::chr2:1459978..1459990,-#_d90ed905d567e34e878a0d4b0da24122p@chr2:1459978..1459990, -
3.49e-79FFCP PHASE1:Hg19::chr22:31521904..31521930,+#_d90ed905d567e34e878a0d4b0da24122p@chr22:31521904..31521930, +
3.49e-79FFCP PHASE2:Hg19::chr8:133895195..133895206,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133895195..133895206, +
3.49e-79FFCP PHASE1:Hg19::chr6:148533199..148533206,+#_d90ed905d567e34e878a0d4b0da24122p@chr6:148533199..148533206, +
3.49e-79FFCP PHASE2:Hg19::chr8:11333494..11333497,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:11333494..11333497, -
3.49e-79FFCP PHASE1:Hg19::chr2:1440089..1440096,+#_d90ed905d567e34e878a0d4b0da24122p@chr2:1440089..1440096, +
3.49e-79FFCP PHASE2:Hg19::chr8:134145732..134145736,+#_d90ed905d567e34e878a0d4b0da24122p27@TG
3.49e-79FFCP PHASE1:Hg19::chr8:133899004..133899013,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:133899004..133899013, -
3.49e-79FFCP PHASE2:Hg19::chr8:133978809..133978829,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133978809..133978829, +
3.49e-79FFCP PHASE2:Hg19::chr8:133981694..133981700,+#_d90ed905d567e34e878a0d4b0da24122p35@TG
3.49e-79FFCP PHASE2:Hg19::chr7:107301447..107301451,+#_d90ed905d567e34e878a0d4b0da24122p23@SLC26A4
3.49e-79FFCP PHASE1:Hg19::chr7:107301340..107301345,+#_d90ed905d567e34e878a0d4b0da24122p13@SLC26A4
3.49e-79FFCP PHASE2:Hg19::chr8:133898904..133898911,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133898904..133898911, +
3.49e-79FFCP PHASE1:Hg19::chr2:134788828..134788834,-#_d90ed905d567e34e878a0d4b0da24122p@chr2:134788828..134788834, -
3.49e-79FFCP PHASE1:Hg19::chr8:133900339..133900344,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:133900339..133900344, -
3.49e-79FFCP PHASE2:Hg19::chr8:134108463..134108470,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:134108463..134108470, +
3.49e-79FFCP PHASE1:Hg19::chr8:133885414..133885420,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:133885414..133885420, -
3.49e-79FFCP PHASE2:Hg19::chr2:1426850..1426859,+#_d90ed905d567e34e878a0d4b0da24122p10@TPO
3.49e-79FFCP PHASE1:Hg19::chr8:133895195..133895206,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133895195..133895206, +
3.49e-79FFCP PHASE2:Hg19::chr7:88388628..88388669,+#_d90ed905d567e34e878a0d4b0da24122p6@ZNF804B
3.49e-79FFCP PHASE1:Hg19::chr8:11333494..11333497,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:11333494..11333497, -
3.49e-79FFCP PHASE2:Hg19::chr8:133899004..133899013,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:133899004..133899013, -
3.49e-79FFCP PHASE1:Hg19::chr19:20473429..20473445,+#_d90ed905d567e34e878a0d4b0da24122p@chr19:20473429..20473445, +
3.49e-79FFCP PHASE1:Hg19::chr8:134145732..134145736,+#_d90ed905d567e34e878a0d4b0da24122p27@TG
3.49e-79FFCP PHASE2:Hg19::chr2:1459978..1459990,-#_d90ed905d567e34e878a0d4b0da24122p@chr2:1459978..1459990, -
3.49e-79FFCP PHASE1:Hg19::chr8:133978809..133978829,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133978809..133978829, +
3.49e-79FFCP PHASE2:Hg19::chr8:133906083..133906088,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133906083..133906088, +
3.49e-79FFCP PHASE2:Hg19::chr8:133900339..133900344,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:133900339..133900344, -
3.49e-79FFCP PHASE2:Hg19::chr2:1440089..1440096,+#_d90ed905d567e34e878a0d4b0da24122p@chr2:1440089..1440096, +
3.49e-79FFCP PHASE1:Hg19::chr8:133898904..133898911,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133898904..133898911, +
3.49e-79FFCP PHASE1:Hg19::chr8:134108463..134108470,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:134108463..134108470, +
3.49e-79FFCP PHASE2:Hg19::chr6:148533199..148533206,+#_d90ed905d567e34e878a0d4b0da24122p@chr6:148533199..148533206, +
3.49e-79FFCP PHASE1:Hg19::chr2:1417344..1417367,+#_d90ed905d567e34e878a0d4b0da24122p@chr2:1417344..1417367, +
3.49e-79FFCP PHASE1:Hg19::chr7:88388628..88388669,+#_d90ed905d567e34e878a0d4b0da24122p6@ZNF804B
3.49e-79FFCP PHASE1:Hg19::chr8:133981703..133981711,+#_d90ed905d567e34e878a0d4b0da24122p31@TG
3.49e-79FFCP PHASE2:Hg19::chr8:133878995..133879011,+#_d90ed905d567e34e878a0d4b0da24122p32@TG
3.49e-79FFCP PHASE2:Hg19::chr8:133935716..133935719,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133935716..133935719, +
3.49e-79FFCP PHASE1:Hg19::chr8:133906083..133906088,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133906083..133906088, +
3.49e-79FFCP PHASE2:Hg19::chr8:133948038..133948045,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133948038..133948045, +
3.49e-79FFCP PHASE2:Hg19::chr8:133895229..133895236,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:133895229..133895236, -
3.49e-79FFCP PHASE2:Hg19::chr7:107301340..107301345,+#_d90ed905d567e34e878a0d4b0da24122p13@SLC26A4
3.49e-79FFCP PHASE2:Hg19::chr2:134788828..134788834,-#_d90ed905d567e34e878a0d4b0da24122p@chr2:134788828..134788834, -
3.49e-79FFCP PHASE2:Hg19::chr8:133981703..133981711,+#_d90ed905d567e34e878a0d4b0da24122p31@TG
3.49e-79FFCP PHASE2:Hg19::chr22:31521904..31521930,+#_d90ed905d567e34e878a0d4b0da24122p@chr22:31521904..31521930, +
3.49e-79FFCP PHASE1:Hg19::chr7:107301406..107301418,+#_d90ed905d567e34e878a0d4b0da24122p5@SLC26A4
3.49e-79FFCP PHASE1:Hg19::chr8:133878995..133879011,+#_d90ed905d567e34e878a0d4b0da24122p32@TG
3.49e-79FFCP PHASE1:Hg19::chr21:39644214..39644219,+#_d90ed905d567e34e878a0d4b0da24122p21@KCNJ15
3.49e-79FFCP PHASE1:Hg19::chr8:133935716..133935719,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133935716..133935719, +
3.49e-79FFCP PHASE1:Hg19::chr8:133900347..133900354,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:133900347..133900354, -
3.49e-79FFCP PHASE1:Hg19::chr8:133895229..133895236,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:133895229..133895236, -
3.49e-79FFCP PHASE2:Hg19::chr8:133898763..133898768,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:133898763..133898768, -
3.49e-79FFCP PHASE1:Hg19::chr4:88047429..88047437,+#_d90ed905d567e34e878a0d4b0da24122p@chr4:88047429..88047437, +
3.49e-79FFCP PHASE1:Hg19::chr9:100615454..100615457,-#_d90ed905d567e34e878a0d4b0da24122p@chr9:100615454..100615457, -
3.49e-79FFCP PHASE2:Hg19::chr2:1417344..1417367,+#_d90ed905d567e34e878a0d4b0da24122p@chr2:1417344..1417367, +
3.49e-79FFCP PHASE1:Hg19::chr2:1457477..1457487,+#_d90ed905d567e34e878a0d4b0da24122p@chr2:1457477..1457487, +
3.49e-79FFCP PHASE1:Hg19::chr8:133948038..133948045,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133948038..133948045, +
3.49e-79FFCP PHASE2:Hg19::chr8:133906121..133906132,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133906121..133906132, +
3.49e-79FFCP PHASE1:Hg19::chr14:81421428..81421431,+#_d90ed905d567e34e878a0d4b0da24122p11@TSHR
3.49e-79FFCP PHASE2:Hg19::chr8:133900347..133900354,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:133900347..133900354, -
3.49e-79FFCP PHASE2:Hg19::chr8:133883693..133883699,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:133883693..133883699, -
3.49e-79FFCP PHASE2:Hg19::chr8:133894753..133894756,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:133894753..133894756, -
3.49e-79FFCP PHASE1:Hg19::chr2:1417430..1417444,+#_d90ed905d567e34e878a0d4b0da24122p@chr2:1417430..1417444, +
3.49e-79FFCP PHASE1:Hg19::chr8:133900606..133900611,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133900606..133900611, +
3.49e-79FFCP PHASE2:Hg19::chr9:100615454..100615457,-#_d90ed905d567e34e878a0d4b0da24122p@chr9:100615454..100615457, -
3.49e-79FFCP PHASE2:Hg19::chr8:134125750..134125765,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:134125750..134125765, +
3.49e-79FFCP PHASE1:Hg19::chr8:133898763..133898768,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:133898763..133898768, -
3.49e-79FFCP PHASE1:Hg19::chr8:133981720..133981727,+#_d90ed905d567e34e878a0d4b0da24122p21@TG
3.49e-79FFCP PHASE1:Hg19::chr16:66420861..66420868,+#_d90ed905d567e34e878a0d4b0da24122p@chr16:66420861..66420868, +
3.49e-79FFCP PHASE1:Hg19::chr9:100616714..100616732,+#_d90ed905d567e34e878a0d4b0da24122p@chr9:100616714..100616732, +
3.49e-79FFCP PHASE2:Hg19::chr8:134107312..134107315,+#_d90ed905d567e34e878a0d4b0da24122p46@TG
3.49e-79FFCP PHASE2:Hg19::chr19:20473429..20473445,+#_d90ed905d567e34e878a0d4b0da24122p@chr19:20473429..20473445, +
3.49e-79FFCP PHASE2:Hg19::chr8:133885307..133885312,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133885307..133885312, +
3.49e-79FFCP PHASE1:Hg19::chr8:133906121..133906132,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133906121..133906132, +
3.49e-79FFCP PHASE2:Hg19::chr7:107301406..107301418,+#_d90ed905d567e34e878a0d4b0da24122p5@SLC26A4
3.49e-79FFCP PHASE1:Hg19::chr8:133883693..133883699,-#_d90ed905d567e34e878a0d4b0da24122p@chr8:133883693..133883699, -
3.49e-79FFCP PHASE2:Hg19::chr8:133900606..133900611,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133900606..133900611, +
3.49e-79FFCP PHASE2:Hg19::chr2:1457477..1457487,+#_d90ed905d567e34e878a0d4b0da24122p@chr2:1457477..1457487, +
3.49e-79FFCP PHASE2:Hg19::chr8:133895057..133895065,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:133895057..133895065, +
3.49e-79FFCP PHASE1:Hg19::chr8:134125750..134125765,+#_d90ed905d567e34e878a0d4b0da24122p@chr8:134125750..134125765, +
3.49e-79FFCP PHASE2:Hg19::chr8:133981720..133981727,+#_d90ed905d567e34e878a0d4b0da24122p21@TG

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