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{{CL
{{CL
|id=CL:0000068
|alt_id=
|name=duct epithelial cell
|namespace=cell
|def=
|xref=
|is_a=CL:0000066;;CL:0002371
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000068
|is_a=CL:0000066 ;;CL:0002371
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=duct epithelial cell
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000058
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:29, 12 September 2014

Name:duct epithelial cell
Namespace:FANTOM


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000066(epithelial cell),CL:0002371(somatic cell)
part_of:UBERON:0000058(duct)



Children


is a:CL:0000069 (branched duct epithelial cell),CL:0002625 (seminiferous tubule epithelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000068 (duct epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr11:96608719..96608730,-#_7b549357fa648c4a250585c093e5795ep1@ENSMUST00000170876, p1@uc011ydj.1
1.58e-86FFCP PHASE2:Mm9::chr12:17549752..17549763,+#_7b549357fa648c4a250585c093e5795ep@chr12:17549752..17549763, +
1.58e-86FFCP PHASE1:Mm9::chr4:88696144..88696152,+#_7b549357fa648c4a250585c093e5795ep3@Gm12603
1.58e-86FFCP PHASE2:Mm9::chr3:89487103..89487111,-#_7b549357fa648c4a250585c093e5795ep@chr3:89487103..89487111, -
1.58e-86FFCP PHASE1:Mm9::chr6:147205677..147205683,+#_7b549357fa648c4a250585c093e5795ep@chr6:147205677..147205683, +
1.58e-86FFCP PHASE2:Mm9::chr5:91199084..91199088,-#_7b549357fa648c4a250585c093e5795ep@chr5:91199084..91199088, -
1.58e-86FFCP PHASE1:Mm9::chr6:147338308..147338339,-#_7b549357fa648c4a250585c093e5795ep@chr6:147338308..147338339, -
1.58e-86FFCP PHASE2:Mm9::chr11:86461733..86461747,-#_7b549357fa648c4a250585c093e5795ep@chr11:86461733..86461747, -
1.58e-86FFCP PHASE1:Mm9::chr9:110941246..110941254,+#_7b549357fa648c4a250585c093e5795ep@chr9:110941246..110941254, +
1.58e-86FFCP PHASE1:Mm9::chr2:164389604..164389615,+#_7b549357fa648c4a250585c093e5795ep@chr2:164389604..164389615, +
1.58e-86FFCP PHASE1:Mm9::chr13:115644652..115644657,-#_7b549357fa648c4a250585c093e5795ep@chr13:115644652..115644657, -
1.58e-86FFCP PHASE1:Mm9::chr2:60538178..60538182,-#_7b549357fa648c4a250585c093e5795ep@chr2:60538178..60538182, -
1.58e-86FFCP PHASE1:Mm9::chr15:101258041..101258052,+#_7b549357fa648c4a250585c093e5795ep@chr15:101258041..101258052, +
1.58e-86FFCP PHASE1:Mm9::chr3:89487103..89487111,-#_7b549357fa648c4a250585c093e5795ep@chr3:89487103..89487111, -
1.58e-86FFCP PHASE2:Mm9::chr11:4165247..4165267,+#_7b549357fa648c4a250585c093e5795ep@chr11:4165247..4165267, +
1.58e-86FFCP PHASE1:Mm9::chr5:91198876..91198885,+#_7b549357fa648c4a250585c093e5795ep@chr5:91198876..91198885, +
1.58e-86FFCP PHASE1:Mm9::chr4:88696177..88696184,+#_7b549357fa648c4a250585c093e5795ep2@Gm12603
1.58e-86FFCP PHASE2:Mm9::chr11:100006864..100006873,+#_7b549357fa648c4a250585c093e5795ep@chr11:100006864..100006873, +
1.58e-86FFCP PHASE2:Mm9::chr9:110941233..110941240,+#_7b549357fa648c4a250585c093e5795ep@chr9:110941233..110941240, +
1.58e-86FFCP PHASE2:Mm9::chr5:135420996..135421000,+#_7b549357fa648c4a250585c093e5795ep@chr5:135420996..135421000, +
1.58e-86FFCP PHASE1:Mm9::chr1:108303887..108303893,+#_7b549357fa648c4a250585c093e5795ep@chr1:108303887..108303893, +
1.58e-86FFCP PHASE1:Mm9::chr2:164393992..164394012,-#_7b549357fa648c4a250585c093e5795ep@chr2:164393992..164394012, -
1.58e-86FFCP PHASE2:Mm9::chr13:72401408..72401416,-#_7b549357fa648c4a250585c093e5795ep@chr13:72401408..72401416, -
1.58e-86FFCP PHASE2:Mm9::chr1:151954385..151954387,+#_7b549357fa648c4a250585c093e5795ep@chr1:151954385..151954387, +
1.58e-86FFCP PHASE1:Mm9::chr11:4165247..4165267,+#_7b549357fa648c4a250585c093e5795ep@chr11:4165247..4165267, +
1.58e-86FFCP PHASE2:Mm9::chr5:135422125..135422141,-#_7b549357fa648c4a250585c093e5795ep@chr5:135422125..135422141, -
1.58e-86FFCP PHASE1:Mm9::chr17:25885558..25885567,+#_7b549357fa648c4a250585c093e5795ep@chr17:25885558..25885567, +
1.58e-86FFCP PHASE2:Mm9::chr6:147205603..147205610,+#_7b549357fa648c4a250585c093e5795ep@chr6:147205603..147205610, +
1.58e-86FFCP PHASE2:Mm9::chr13:115644652..115644657,-#_7b549357fa648c4a250585c093e5795ep@chr13:115644652..115644657, -
1.58e-86FFCP PHASE1:Mm9::chr11:86461733..86461747,-#_7b549357fa648c4a250585c093e5795ep@chr11:86461733..86461747, -
1.58e-86FFCP PHASE1:Mm9::chr5:91199084..91199088,-#_7b549357fa648c4a250585c093e5795ep@chr5:91199084..91199088, -
1.58e-86FFCP PHASE2:Mm9::chr9:110941246..110941254,+#_7b549357fa648c4a250585c093e5795ep@chr9:110941246..110941254, +
1.58e-86FFCP PHASE2:Mm9::chr2:164389604..164389615,+#_7b549357fa648c4a250585c093e5795ep@chr2:164389604..164389615, +
1.58e-86FFCP PHASE2:Mm9::chr4:88696144..88696152,+#_7b549357fa648c4a250585c093e5795ep3@Gm12603
1.58e-86FFCP PHASE1:Mm9::chr13:115722413..115722430,+#_7b549357fa648c4a250585c093e5795ep@chr13:115722413..115722430, +
1.58e-86FFCP PHASE1:Mm9::chr4:88563185..88563192,-#_7b549357fa648c4a250585c093e5795ep@chr4:88563185..88563192, -
1.58e-86FFCP PHASE2:Mm9::chr6:147205677..147205683,+#_7b549357fa648c4a250585c093e5795ep@chr6:147205677..147205683, +
1.58e-86FFCP PHASE1:Mm9::chr5:135422125..135422141,-#_7b549357fa648c4a250585c093e5795ep@chr5:135422125..135422141, -
1.58e-86FFCP PHASE1:Mm9::chr13:72401408..72401416,-#_7b549357fa648c4a250585c093e5795ep@chr13:72401408..72401416, -
1.58e-86FFCP PHASE1:Mm9::chr1:151954385..151954387,+#_7b549357fa648c4a250585c093e5795ep@chr1:151954385..151954387, +
1.58e-86FFCP PHASE2:Mm9::chr2:164393992..164394012,-#_7b549357fa648c4a250585c093e5795ep@chr2:164393992..164394012, -
1.58e-86FFCP PHASE1:Mm9::chr11:100006864..100006873,+#_7b549357fa648c4a250585c093e5795ep@chr11:100006864..100006873, +
1.58e-86FFCP PHASE2:Mm9::chr15:101258041..101258052,+#_7b549357fa648c4a250585c093e5795ep@chr15:101258041..101258052, +
1.58e-86FFCP PHASE1:Mm9::chr11:96608719..96608730,-#_7b549357fa648c4a250585c093e5795ep1@ENSMUST00000170876, p1@uc011ydj.1
1.58e-86FFCP PHASE2:Mm9::chr1:108303887..108303893,+#_7b549357fa648c4a250585c093e5795ep@chr1:108303887..108303893, +
1.58e-86FFCP PHASE1:Mm9::chr5:135420996..135421000,+#_7b549357fa648c4a250585c093e5795ep@chr5:135420996..135421000, +
1.58e-86FFCP PHASE2:Mm9::chr4:88696177..88696184,+#_7b549357fa648c4a250585c093e5795ep2@Gm12603
1.58e-86FFCP PHASE1:Mm9::chr12:17549752..17549763,+#_7b549357fa648c4a250585c093e5795ep@chr12:17549752..17549763, +
1.58e-86FFCP PHASE1:Mm9::chr6:147205603..147205610,+#_7b549357fa648c4a250585c093e5795ep@chr6:147205603..147205610, +
1.58e-86FFCP PHASE2:Mm9::chr2:60538178..60538182,-#_7b549357fa648c4a250585c093e5795ep@chr2:60538178..60538182, -
1.58e-86FFCP PHASE2:Mm9::chr5:91198876..91198885,+#_7b549357fa648c4a250585c093e5795ep@chr5:91198876..91198885, +
1.58e-86FFCP PHASE1:Mm9::chr16:32641594..32641601,+#_7b549357fa648c4a250585c093e5795ep@chr16:32641594..32641601, +
1.58e-86FFCP PHASE2:Mm9::chr17:25885558..25885567,+#_7b549357fa648c4a250585c093e5795ep@chr17:25885558..25885567, +
1.58e-86FFCP PHASE2:Mm9::chr13:115722413..115722430,+#_7b549357fa648c4a250585c093e5795ep@chr13:115722413..115722430, +
1.58e-86FFCP PHASE1:Mm9::chr9:110941233..110941240,+#_7b549357fa648c4a250585c093e5795ep@chr9:110941233..110941240, +
1.58e-86FFCP PHASE2:Mm9::chr16:32641594..32641601,+#_7b549357fa648c4a250585c093e5795ep@chr16:32641594..32641601, +
1.58e-86FFCP PHASE2:Mm9::chr4:88563185..88563192,-#_7b549357fa648c4a250585c093e5795ep@chr4:88563185..88563192, -
1.58e-86FFCP PHASE2:Mm9::chr6:147338308..147338339,-#_7b549357fa648c4a250585c093e5795ep@chr6:147338308..147338339, -
1.28e-84FFCP PHASE2:Hg19::chr7:135018332..135018336,+#_caaed1569f59d2fc4e5d4a300ef949a0p@chr7:135018332..135018336, +
1.28e-84FFCP PHASE1:Hg19::chr7:135018332..135018336,+#_caaed1569f59d2fc4e5d4a300ef949a0p@chr7:135018332..135018336, +
1.66e-74FFCP PHASE2:Hg19::chr5:52627415..52627422,-#_31a42e540af684fbe1b38d8984f8a808p@chr5:52627415..52627422, -
1.66e-74FFCP PHASE1:Hg19::chr5:52627415..52627422,-#_31a42e540af684fbe1b38d8984f8a808p@chr5:52627415..52627422, -
9.82e-67FFCP PHASE2:Hg19::chr4:74977698..74977700,+#_d7b6c2ee15b434e1d706a004b848db13p@chr4:74977698..74977700, +
9.82e-67FFCP PHASE1:Hg19::chr4:74977698..74977700,+#_d7b6c2ee15b434e1d706a004b848db13p@chr4:74977698..74977700, +
1.23e-66FFCP PHASE1:Hg19::chr4:26089776..26089781,+#_16365c413de854530a8d759bbfb699aap@chr4:26089776..26089781, +
1.23e-66FFCP PHASE2:Hg19::chr4:26089776..26089781,+#_16365c413de854530a8d759bbfb699aap@chr4:26089776..26089781, +
1.71e-66FFCP PHASE2:Hg19::chr5:138751193..138751196,-#_4c0d7d8912689149d06fe5f7ca0d868dp@chr5:138751193..138751196, -
1.71e-66FFCP PHASE1:Hg19::chr5:138751193..138751196,-#_4c0d7d8912689149d06fe5f7ca0d868dp@chr5:138751193..138751196, -
3.35e-66FFCP PHASE1:Hg19::chr11:46934513..46934519,+#_0f063fe15a7b270261bd22b007d549e6p@chr11:46934513..46934519, +
3.35e-66FFCP PHASE2:Hg19::chr11:46934513..46934519,+#_0f063fe15a7b270261bd22b007d549e6p@chr11:46934513..46934519, +
1.33e-65FFCP PHASE2:Mm9::chr11:4164303..4164316,+#_5792f10c9c95d5eae36f0407906e85c7p@chr11:4164303..4164316, +
1.33e-65FFCP PHASE1:Mm9::chr14:34905716..34905718,+#_5792f10c9c95d5eae36f0407906e85c7p@chr14:34905716..34905718, +
1.33e-65FFCP PHASE1:Mm9::chr11:4164303..4164316,+#_5792f10c9c95d5eae36f0407906e85c7p@chr11:4164303..4164316, +
1.33e-65FFCP PHASE1:Mm9::chr11:100002128..100002131,+#_5792f10c9c95d5eae36f0407906e85c7p@chr11:100002128..100002131, +
1.33e-65FFCP PHASE1:Mm9::chr2:144564146..144564166,+#_5792f10c9c95d5eae36f0407906e85c7p3@Dtd1
1.33e-65FFCP PHASE1:Mm9::chr3:90392458..90392472,+#_5792f10c9c95d5eae36f0407906e85c7p@chr3:90392458..90392472, +
1.33e-65FFCP PHASE2:Mm9::chr2:144564146..144564166,+#_5792f10c9c95d5eae36f0407906e85c7p3@Dtd1
1.33e-65FFCP PHASE2:Mm9::chr6:147212620..147212625,+#_5792f10c9c95d5eae36f0407906e85c7p@chr6:147212620..147212625, +
1.33e-65FFCP PHASE2:Mm9::chr3:90392458..90392472,+#_5792f10c9c95d5eae36f0407906e85c7p@chr3:90392458..90392472, +
1.33e-65FFCP PHASE1:Mm9::chr19:47939269..47939279,-#_5792f10c9c95d5eae36f0407906e85c7p@chr19:47939269..47939279, -
1.33e-65FFCP PHASE1:Mm9::chr14:31386795..31386797,-#_5792f10c9c95d5eae36f0407906e85c7p@chr14:31386795..31386797, -
1.33e-65FFCP PHASE1:Mm9::chr6:147212620..147212625,+#_5792f10c9c95d5eae36f0407906e85c7p@chr6:147212620..147212625, +
1.33e-65FFCP PHASE1:Mm9::chr3:121437538..121437546,+#_5792f10c9c95d5eae36f0407906e85c7p@chr3:121437538..121437546, +
1.33e-65FFCP PHASE2:Mm9::chr3:121437538..121437546,+#_5792f10c9c95d5eae36f0407906e85c7p@chr3:121437538..121437546, +
1.33e-65FFCP PHASE2:Mm9::chr19:47932377..47932386,-#_5792f10c9c95d5eae36f0407906e85c7p@chr19:47932377..47932386, -
1.33e-65FFCP PHASE1:Mm9::chrX:20383628..20383635,+#_5792f10c9c95d5eae36f0407906e85c7p@chrX:20383628..20383635, +
1.33e-65FFCP PHASE1:Mm9::chr19:47932377..47932386,-#_5792f10c9c95d5eae36f0407906e85c7p@chr19:47932377..47932386, -
1.33e-65FFCP PHASE2:Mm9::chr11:100002128..100002131,+#_5792f10c9c95d5eae36f0407906e85c7p@chr11:100002128..100002131, +
1.33e-65FFCP PHASE2:Mm9::chr11:29642912..29642916,-#_5792f10c9c95d5eae36f0407906e85c7p@chr11:29642912..29642916, -
1.33e-65FFCP PHASE1:Mm9::chr11:29642912..29642916,-#_5792f10c9c95d5eae36f0407906e85c7p@chr11:29642912..29642916, -
1.33e-65FFCP PHASE2:Mm9::chrX:20383628..20383635,+#_5792f10c9c95d5eae36f0407906e85c7p@chrX:20383628..20383635, +
1.33e-65FFCP PHASE1:Mm9::chr3:121437587..121437593,+#_5792f10c9c95d5eae36f0407906e85c7p@chr3:121437587..121437593, +
1.33e-65FFCP PHASE2:Mm9::chr14:31386795..31386797,-#_5792f10c9c95d5eae36f0407906e85c7p@chr14:31386795..31386797, -
1.33e-65FFCP PHASE2:Mm9::chr19:47939269..47939279,-#_5792f10c9c95d5eae36f0407906e85c7p@chr19:47939269..47939279, -
1.33e-65FFCP PHASE2:Mm9::chr3:121437587..121437593,+#_5792f10c9c95d5eae36f0407906e85c7p@chr3:121437587..121437593, +
1.33e-65FFCP PHASE2:Mm9::chr14:34905716..34905718,+#_5792f10c9c95d5eae36f0407906e85c7p@chr14:34905716..34905718, +
6.04e-65FFCP PHASE2:Mm9::chr15:38385124..38385138,+#_6442cbccee60fd2b2ec36d69b8ce4273p@chr15:38385124..38385138, +
6.04e-65FFCP PHASE2:Mm9::chr19:47928736..47928764,+#_6442cbccee60fd2b2ec36d69b8ce4273p@chr19:47928736..47928764, +
6.04e-65FFCP PHASE2:Mm9::chr17:25888467..25888513,-#_6442cbccee60fd2b2ec36d69b8ce4273p@chr17:25888467..25888513, -
6.04e-65FFCP PHASE1:Mm9::chr15:38385124..38385138,+#_6442cbccee60fd2b2ec36d69b8ce4273p@chr15:38385124..38385138, +

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