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{{CL
{{CL
|id=CL:0000038
|alt_id=
|name=erythroid progenitor cell
|namespace=cell;;efo
|def="A progenitor cell committed to the erythroid lineage. This cell is ter119-positive but lacks expression of other hematopoietic lineage markers (lin-negative)." [GOC:add, ISBN:0721601464]
|xref=BTO:0004911
|is_a=CL:0000764;;CL:0000839
|synonym="BFU-E" RELATED [];;"blast forming unit erythroid" RELATED [];;"burst forming unit erythroid" RELATED [];;"CFU-E" RELATED [];;"colony forming unit erythroid" RELATED [];;"erythroid stem cell" RELATED []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A progenitor cell committed to the erythroid lineage. This cell is ter119-positive but lacks expression of other hematopoietic lineage markers (lin-negative)." [GOC:add, ISBN:0721601464]
|subset=
|derives_from=
|derives_from=
|develops_from=CL:0000050
|develops_from=CL:0000050
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000038
|is_a=CL:0000764 ;;CL:0000839
|is_obsolete=
|located_in=
|located_in=
|name=erythroid progenitor cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="BFU-E" RELATED [];;"blast forming unit erythroid" RELATED [];;"burst forming unit erythroid" RELATED [];;"CFU-E" RELATED [];;"colony forming unit erythroid" RELATED [];;"erythroid stem cell" RELATED []
|union_of=
|xref=BTO:0004911
}}
}}

Latest revision as of 16:28, 12 September 2014

Name:erythroid progenitor cell
Namespace:FANTOM
Definition:"A progenitor cell committed to the erythroid lineage. This cell is ter119-positive but lacks expression of other hematopoietic lineage markers (lin-negative)." [GOC:add, ISBN:0721601464]
Xrefs:
links:
BTO:0004911
Synonyms: "BFU-E" RELATED []
"blast forming unit erythroid" RELATED []
"burst forming unit erythroid" RELATED []
"CFU-E" RELATED []
"colony forming unit erythroid" RELATED []
"erythroid stem cell" RELATED []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000764(erythroid lineage cell),CL:0000839(myeloid lineage restricted progenitor cell)
develops_from:CL:0000050(megakaryocyte-erythroid progenitor cell)



Children


is a:FF:0000055 (erythroid progenitor cell)
develops from:CL:0000547 (proerythroblast)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.



Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000038 (erythroid progenitor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.29e-195FFCP PHASE2:Hg19::chr16:15616042..15616045,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr16:15616042..15616045, +
3.29e-195FFCP PHASE2:Hg19::chr1:95582484..95582492,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p10@TMEM56
3.29e-195FFCP PHASE1:Hg19::chr1:95582484..95582492,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p10@TMEM56
3.29e-195FFCP PHASE2:Hg19::chr6:10585661..10585670,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p26@GCNT2
3.29e-195FFCP PHASE2:Hg19::chr1:25598993..25599007,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p1@RHD
3.29e-195FFCP PHASE1:Hg19::chr1:25598993..25599007,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p1@RHD
3.29e-195FFCP PHASE1:Hg19::chr1:220146675..220146678,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr1:220146675..220146678, -
3.29e-195FFCP PHASE1:Hg19::chr16:227522..227524,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr16:227522..227524, +
3.29e-195FFCP PHASE2:Hg19::chr17:42366115..42366125,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr17:42366115..42366125, +
3.29e-195FFCP PHASE1:Hg19::chr19:1207927..1207939,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr19:1207927..1207939, -
3.29e-195FFCP PHASE2:Hg19::chr12:75560876..75560881,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr12:75560876..75560881, +
3.29e-195FFCP PHASE1:Hg19::chr1:5543682..5543685,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr1:5543682..5543685, +
3.29e-195FFCP PHASE1:Hg19::chr7:23205190..23205198,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p10@KLHL7
3.29e-195FFCP PHASE2:Hg19::chr4:82805715..82805717,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:82805715..82805717, +
3.29e-195FFCP PHASE2:Hg19::chr11:115492263..115492265,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:115492263..115492265, +
3.29e-195FFCP PHASE1:Hg19::chr4:82805715..82805717,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:82805715..82805717, +
3.29e-195FFCP PHASE1:Hg19::chr11:115492263..115492265,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:115492263..115492265, +
3.29e-195FFCP PHASE1:Hg19::chr6:155472342..155472346,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr6:155472342..155472346, -
3.29e-195FFCP PHASE2:Hg19::chr1:5543682..5543685,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr1:5543682..5543685, +
3.29e-195FFCP PHASE2:Hg19::chr7:23205201..23205207,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p13@KLHL7
3.29e-195FFCP PHASE2:Hg19::chr14:96742091..96742094,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr14:96742091..96742094, -
3.29e-195FFCP PHASE2:Hg19::chr12:131245491..131245492,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr12:131245491..131245492, +
3.29e-195FFCP PHASE2:Hg19::chr15:71406717..71406718,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr15:71406717..71406718, +
3.29e-195FFCP PHASE2:Hg19::chr4:175593804..175593809,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:175593804..175593809, +
3.29e-195FFCP PHASE1:Hg19::chr4:175593804..175593809,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:175593804..175593809, +
3.29e-195FFCP PHASE1:Hg19::chr6:10585661..10585670,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p26@GCNT2
3.29e-195FFCP PHASE2:Hg19::chr17:42343955..42343974,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr17:42343955..42343974, -
3.29e-195FFCP PHASE1:Hg19::chr14:55799575..55799582,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr14:55799575..55799582, +
3.29e-195FFCP PHASE2:Hg19::chr9:138852021..138852030,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr9:138852021..138852030, +
3.29e-195FFCP PHASE2:Hg19::chr6:10585672..10585677,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p42@GCNT2
3.29e-195FFCP PHASE2:Hg19::chr1:25599018..25599028,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p3@RHD
3.29e-195FFCP PHASE1:Hg19::chr1:25599018..25599028,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p3@RHD
3.29e-195FFCP PHASE1:Hg19::chr2:71833597..71833600,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr2:71833597..71833600, +
3.29e-195FFCP PHASE2:Hg19::chr4:190941380..190941381,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:190941380..190941381, +
3.29e-195FFCP PHASE2:Hg19::chr3:49726561..49726577,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p3@RNF123
3.29e-195FFCP PHASE2:Hg19::chr19:19535964..19535966,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr19:19535964..19535966, +
3.29e-195FFCP PHASE1:Hg19::chr4:190941380..190941381,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:190941380..190941381, +
3.29e-195FFCP PHASE1:Hg19::chr3:49726561..49726577,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p3@RNF123
3.29e-195FFCP PHASE1:Hg19::chr19:19535964..19535966,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr19:19535964..19535966, +
3.29e-195FFCP PHASE1:Hg19::chr13:23969126..23969130,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr13:23969126..23969130, +
3.29e-195FFCP PHASE2:Hg19::chr17:42392517..42392522,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p17@RUNDC3A
3.29e-195FFCP PHASE2:Hg19::chr2:71833597..71833600,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr2:71833597..71833600, +
3.29e-195FFCP PHASE2:Hg19::chr9:123853258..123853276,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr9:123853258..123853276, -
3.29e-195FFCP PHASE1:Hg19::chr7:23205201..23205207,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p13@KLHL7
3.29e-195FFCP PHASE2:Hg19::chr1:158580993..158580998,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr1:158580993..158580998, -
3.29e-195FFCP PHASE1:Hg19::chr1:158580993..158580998,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr1:158580993..158580998, -
3.29e-195FFCP PHASE2:Hg19::chr11:66676050..66676060,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:66676050..66676060, +
3.29e-195FFCP PHASE2:Hg19::chr10:86596455..86596456,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr10:86596455..86596456, +
3.29e-195FFCP PHASE1:Hg19::chr18:11740276..11740278,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr18:11740276..11740278, +
3.29e-195FFCP PHASE1:Hg19::chr10:86596455..86596456,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr10:86596455..86596456, +
3.29e-195FFCP PHASE1:Hg19::chr9:138852021..138852030,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr9:138852021..138852030, +
3.29e-195FFCP PHASE1:Hg19::chr11:57416011..57416016,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p9@CLP1
3.29e-195FFCP PHASE1:Hg19::chr13:106256314..106256318,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr13:106256314..106256318, +
3.29e-195FFCP PHASE1:Hg19::chr12:131245491..131245492,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr12:131245491..131245492, +
3.29e-195FFCP PHASE1:Hg19::chr6:10585672..10585677,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p42@GCNT2
3.29e-195FFCP PHASE2:Hg19::chr11:5247692..5247701,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:5247692..5247701, -
3.29e-195FFCP PHASE1:Hg19::chr11:5247692..5247701,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:5247692..5247701, -
3.29e-195FFCP PHASE2:Hg19::chr4:160049078..160049079,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:160049078..160049079, +
3.29e-195FFCP PHASE1:Hg19::chr9:123853258..123853276,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr9:123853258..123853276, -
3.29e-195FFCP PHASE2:Hg19::chr6:10585684..10585689,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p37@GCNT2
3.29e-195FFCP PHASE2:Hg19::chr8:101412217..101412218,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr8:101412217..101412218, +
3.29e-195FFCP PHASE2:Hg19::chr4:26378984..26378987,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:26378984..26378987, +
3.29e-195FFCP PHASE1:Hg19::chr16:15616042..15616045,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr16:15616042..15616045, +
3.29e-195FFCP PHASE2:Hg19::chr3:49726589..49726592,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p7@RNF123
3.29e-195FFCP PHASE1:Hg19::chr4:26378984..26378987,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:26378984..26378987, +
3.29e-195FFCP PHASE1:Hg19::chr3:49726589..49726592,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p7@RNF123
3.29e-195FFCP PHASE2:Hg19::chr11:5255612..5255613,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p10@HBD
3.29e-195FFCP PHASE1:Hg19::chr17:27188395..27188398,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p1@MIR451A
3.29e-195FFCP PHASE1:Hg19::chr11:5255612..5255613,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p10@HBD
3.29e-195FFCP PHASE2:Hg19::chr9:45465498..45465501,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr9:45465498..45465501, +
3.29e-195FFCP PHASE1:Hg19::chr11:29581179..29581180,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:29581179..29581180, +
3.29e-195FFCP PHASE2:Hg19::chr13:78682773..78682778,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr13:78682773..78682778, +
3.29e-195FFCP PHASE2:Hg19::chr11:57415965..57415973,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p5@CLP1
3.29e-195FFCP PHASE2:Hg19::chr2:112191654..112191660,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr2:112191654..112191660, -
3.29e-195FFCP PHASE2:Hg19::chr11:29581179..29581180,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:29581179..29581180, +
3.29e-195FFCP PHASE1:Hg19::chr2:112191654..112191660,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr2:112191654..112191660, -
3.29e-195FFCP PHASE1:Hg19::chr12:75560876..75560881,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr12:75560876..75560881, +
3.29e-195FFCP PHASE2:Hg19::chr14:55799575..55799582,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr14:55799575..55799582, +
3.29e-195FFCP PHASE2:Hg19::chr1:25598961..25598966,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p5@RHD
3.29e-195FFCP PHASE2:Hg19::chr16:227522..227524,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr16:227522..227524, +
3.29e-195FFCP PHASE1:Hg19::chr1:25598961..25598966,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p5@RHD
3.29e-195FFCP PHASE2:Hg19::chr1:207823590..207823599,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr1:207823590..207823599, +
3.29e-195FFCP PHASE1:Hg19::chr4:160049078..160049079,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:160049078..160049079, +
3.29e-195FFCP PHASE1:Hg19::chr14:96742091..96742094,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr14:96742091..96742094, -
3.29e-195FFCP PHASE2:Hg19::chr11:5248435..5248444,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:5248435..5248444, +
3.29e-195FFCP PHASE1:Hg19::chr11:5248435..5248444,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:5248435..5248444, +
3.29e-195FFCP PHASE1:Hg19::chr6:10585684..10585689,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p37@GCNT2
3.29e-195FFCP PHASE1:Hg19::chr15:71406717..71406718,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr15:71406717..71406718, +
3.29e-195FFCP PHASE1:Hg19::chr8:101412217..101412218,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr8:101412217..101412218, +
3.29e-195FFCP PHASE1:Hg19::chr17:42366115..42366125,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr17:42366115..42366125, +
3.29e-195FFCP PHASE2:Hg19::chr11:5247730..5247736,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:5247730..5247736, -
3.29e-195FFCP PHASE1:Hg19::chr11:5247730..5247736,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:5247730..5247736, -
3.29e-195FFCP PHASE2:Hg19::chr6:50700492..50700495,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr6:50700492..50700495, +
3.29e-195FFCP PHASE1:Hg19::chr6:50700492..50700495,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr6:50700492..50700495, +
3.29e-195FFCP PHASE1:Hg19::chr9:45465498..45465501,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr9:45465498..45465501, +
3.29e-195FFCP PHASE1:Hg19::chrX:107332036..107332041,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chrX:107332036..107332041, +
3.29e-195FFCP PHASE2:Hg19::chrX:107332036..107332041,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chrX:107332036..107332041, +
3.29e-195FFCP PHASE2:Hg19::chr3:49726593..49726603,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p4@RNF123
3.29e-195FFCP PHASE1:Hg19::chr3:49726593..49726603,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p4@RNF123
3.29e-195FFCP PHASE2:Hg19::chr16:67228546..67228549,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr16:67228546..67228549, +

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