UBERON:0001714: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:0003213 | ||
|comment=Editor note: split out MA ter,. Note the MA term is part of the CNS. This needs to be checked w.r.t relationship between ganglia and the PNS, as the PNS and CNS are spatially disjoint. also meaning of MA term is not clear (appears to be union of nerve and ganglion, but MA 'cranial nerve' is unconnected) | |comment=Editor note: split out MA ter,. Note the MA term is part of the CNS. This needs to be checked w.r.t relationship between ganglia and the PNS, as the PNS and CNS are spatially disjoint. also meaning of MA term is not clear (appears to be union of nerve and ganglion, but MA 'cranial nerve' is unconnected) | ||
|created_by= | |created_by= | ||
| | |def="Ganglion of a cranial nerve[cjm]." [Wikipedia:Cranial_nerve_ganglion] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0001714 | |||
|is_a=UBERON:0000045 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of=UBERON:0000033 | |name=cranial ganglion | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000033 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Ganglion which is located in the head.[TAO]" xsd:string | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Ganglion which is located in the head.[TAO]" xsd:string | ||
| | |subset=uberon_slim;;vertebrate_core | ||
| | |synonym="cranial ganglia" RELATED [];;"cranial ganglion" EXACT [];;"cranial ganglion/nerve" EXACT [];;"cranial nerve ganglion" EXACT [];;"cranial neural ganglion" EXACT [];;"cranial neural tree organ ganglion" EXACT [OBOL:automatic];;"ganglion of cranial nerve" EXACT [FMA:54502];;"ganglion of cranial neural tree organ" EXACT [OBOL:automatic];;"head ganglion" RELATED [];;"presumptive cranial ganglia" RELATED [ZFA:0000013] | ||
|union_of= | |||
|xref=BTO:0000106;;EFO:0000902;;EMAPA:16659;;FMA:54502;;MA:0000213;;MA:0000214;;MAT:0000200;;MIAA:0000200;;SCTID:244448001;;TAO:0000013;;VHOG:0000076;;XAO:0000027;;ZFA:0000013 | |||
}} | }} | ||
Latest revision as of 17:19, 12 September 2014
| Name: | cranial ganglion | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Ganglion of a cranial nerve[cjm]." [Wikipedia:Cranial_nerve_ganglion] | ||
| Xrefs: |
| ||
| Synonyms: |
"cranial ganglia" RELATED [] "cranial ganglion" EXACT [] "cranial ganglion/nerve" EXACT [] "cranial nerve ganglion" EXACT [] "cranial neural ganglion" EXACT [] "cranial neural tree organ ganglion" EXACT [OBOL:automatic] "ganglion of cranial nerve" EXACT [FMA:54502] "ganglion of cranial neural tree organ" EXACT [OBOL:automatic] "head ganglion" RELATED [] "presumptive cranial ganglia" RELATED [ZFA:0000013] | ||
| Comments: | Editor note: split out MA ter,. Note the MA term is part of the CNS. This needs to be checked w.r.t relationship between ganglia and the PNS, as the PNS and CNS are spatially disjoint. also meaning of MA term is not clear (appears to be union of nerve and ganglion, but MA 'cranial nerve' is unconnected) | ||
| Alt_id: | UBERON:0003213 | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000045(ganglion) |
|---|---|
| part_of: | UBERON:0000033(head) |
Children
| is a: | UBERON:0000395 (cochlear ganglion),UBERON:0002827 (vestibulocochlear ganglion),UBERON:0012175 (acoustico-facial VII-VIII ganglion complex) |
|---|---|
| part of: | UBERON:0006232 (facio-acoustic VII-VIII preganglion complex) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 11959-126C6 (Neurons - spiral ganglion, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001714 (cranial ganglion), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
Property "Property value" (as page type) with input value "UBPROP:0000001 "Ganglion which is located in the head.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
