FFCP PHASE1:Hg19::chr19:55833692..55833705,-: Difference between revisions
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|id=chr19:55833692..55833705,-
|short_description=p@chr19:55833692..55833705,-
|description=CAGE_peak_at_chr19:55833692..55833705,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:55833692..55833705,- | |||
|coexpression_cluster_id=C124 | |||
|description=CAGE_peak_at_chr19:55833692..55833705,- | |||
|id=chr19:55833692..55833705,- | |||
|ontology_enrichment_celltype=CL:0002563!1.78e-10!4 | |||
|ontology_enrichment_celltype_v019=CL:0002563;2.52e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.61e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:9119!5.05e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.66e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.78e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!4.33e-21!27;UBERON:0005409!3.40e-16!35;UBERON:0000059!4.03e-14!11;UBERON:0001242!1.78e-10!4;UBERON:0001262!1.78e-10!4;UBERON:0004786!1.78e-10!4;UBERON:0004808!1.78e-10!4;UBERON:0001277!1.78e-10!4;UBERON:0001052!2.25e-10!4;UBERON:0001155!3.81e-10!9;UBERON:0003350!1.48e-08!5;UBERON:0004907!1.79e-08!5;UBERON:0004921!3.57e-07!129;UBERON:0004185!3.57e-07!129;UBERON:0001007!6.77e-07!155;UBERON:0001555!6.77e-07!155;UBERON:0007026!6.77e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.73e-51;4!UBERON:0000160;2.67e-39;17!UBERON:0005409;6.93e-31;22!UBERON:0004921;4.85e-19;33!UBERON:0002114;8.57e-11;2!UBERON:0001555;1.44e-08;54!UBERON:0001242;2.52e-08;4!UBERON:0001262;2.52e-08;4!UBERON:0004786;2.52e-08;4!UBERON:0004808;2.52e-08;4!UBERON:0001277;2.52e-08;4!UBERON:0000922;8.26e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.30e-51,4;UBERON:0000160,2.56e-39,17;UBERON:0005409,2.13e-27,25;UBERON:0002114,8.17e-11,2;UBERON:0001242,2.61e-08,4;UBERON:0001262,2.61e-08,4;UBERON:0004786,2.61e-08,4;UBERON:0004808,2.61e-08,4;UBERON:0001277,2.61e-08,4 | |||
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|short_description=p@chr19:55833692..55833705,- | |||
}} | }} |
Latest revision as of 17:27, 27 July 2015
Short description: | p@chr19:55833692..55833705, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:55833692..55833705, - |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
small intestine | 2.30e-51 | 4 |
intestine | 2.56e-39 | 17 |
gastrointestinal system | 2.13e-27 | 25 |
duodenum | 8.17e-11 | 2 |
intestinal mucosa | 2.61e-08 | 4 |
wall of intestine | 2.61e-08 | 4 |
gastrointestinal system mucosa | 2.61e-08 | 4 |
gastrointestinal system epithelium | 2.61e-08 | 4 |
intestinal epithelium | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.78e-15 | 2 |