FFCP PHASE1:Hg19::chr19:6693489..6693505,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:6693489..6693505,-
|short_description=p16@C3
|description=CAGE_peak_16_at_C3_5end
|association_with_transcript=-394bp_to_ENST00000475508_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=718 | |EntrezGene=718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1318 | |HGNC=1318 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-394bp_to_ENST00000475508_5end | |||
|cluster_id=chr19:6693489..6693505,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_16_at_C3_5end | |||
|id=chr19:6693489..6693505,- | |||
|ontology_enrichment_celltype=CL:0000181!7.16e-09!12;CL:0000417!7.16e-09!12;CL:0000668!7.16e-09!12;CL:0000414!7.16e-09!12;CL:0000412!7.16e-09!12;CL:0000182!7.16e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.63e-23;12!CL:0000511;6.46e-09;1!CL:0002625;6.46e-09;1!CL:0000216;6.46e-09;1!CL:0002595;2.87e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.48e-23,12;CL:0000511,3.58e-09,1;CL:0002625,3.58e-09,1;CL:0000216,3.58e-09,1;CL:0002595,2.88e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.26e-17;11!UBERON:0009497;6.80e-15;13!UBERON:0004874;6.46e-09;1!UBERON:0001041;7.56e-09;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;6.46e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.03e-15!115;UBERON:0000477!1.86e-10!286;UBERON:0002107!2.48e-10!19;UBERON:0006925!2.48e-10!19;UBERON:0008836!2.48e-10!19;UBERON:0004111!1.26e-09!241;UBERON:0000481!1.71e-09!347;UBERON:0009497!2.13e-09!25;UBERON:0000015!2.13e-09!25;UBERON:0002423!2.13e-09!25;UBERON:0006235!2.13e-09!25;UBERON:0004161!2.13e-09!25;UBERON:0009854!4.04e-09!23;UBERON:0009856!9.81e-09!26;UBERON:0005057!1.94e-08!26;UBERON:0008835!2.18e-08!22;UBERON:0003894!2.18e-08!22;UBERON:0000025!2.86e-08!194;UBERON:0007499!4.87e-08!25;UBERON:0002365!6.41e-08!31;UBERON:0002330!6.41e-08!31;UBERON:0002368!6.42e-08!35;UBERON:0004921!1.29e-07!129;UBERON:0004185!1.29e-07!129;UBERON:0001007!1.49e-07!155;UBERON:0001555!1.49e-07!155;UBERON:0007026!1.49e-07!155;UBERON:0001041!1.72e-07!98;UBERON:0004119!3.09e-07!169;UBERON:0000925!3.09e-07!169;UBERON:0006595!3.09e-07!169;UBERON:0003929!3.88e-07!54;UBERON:0000077!6.16e-07!130;UBERON:0003914!7.16e-07!118;UBERON:0003104!9.88e-07!238;UBERON:0009142!9.88e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.53e-25;19!UBERON:0006925;1.53e-25;19!UBERON:0002423;3.69e-19;25!UBERON:0002365;4.97e-19;31!UBERON:0002330;4.97e-19;31!UBERON:0002368;2.80e-13;33!UBERON:0001282;3.05e-09;1!UBERON:0009842;3.05e-09;1!UBERON:0003704;3.05e-09;1!UBERON:0001171;3.05e-09;1!UBERON:0001172;3.05e-09;1!UBERON:0000989;6.46e-09;1!UBERON:0001136;6.46e-09;1!UBERON:0001343;6.46e-09;1!UBERON:0002171;6.46e-09;1!UBERON:0008811;6.46e-09;1!UBERON:0006518;6.46e-09;1!UBERON:0008949;6.46e-09;1!UBERON:0004910;6.46e-09;1!UBERON:0000101;6.46e-09;1!UBERON:0004813;6.46e-09;1!UBERON:0002167;6.46e-09;1!UBERON:0000949;6.07e-08;43!UBERON:0003834;2.87e-07;5!UBERON:0001533;2.87e-07;5!UBERON:0005172;6.06e-07;52!UBERON:0005173;6.06e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.42e-25,19;UBERON:0006925,2.42e-25,19;UBERON:0008836,2.42e-25,19;UBERON:0008835,9.55e-22,22;UBERON:0003894,9.55e-22,22;UBERON:0009854,9.35e-21,23;UBERON:0007499,5.19e-19,25;UBERON:0009497,5.19e-19,25;UBERON:0000015,5.19e-19,25;UBERON:0002423,5.19e-19,25;UBERON:0006235,5.19e-19,25;UBERON:0004161,5.19e-19,25;UBERON:0002365,5.40e-19,31;UBERON:0002330,5.40e-19,31;UBERON:0009856,3.07e-18,26;UBERON:0002368,2.84e-13,35;UBERON:0000949,4.42e-10,45;UBERON:0002530,2.45e-09,59;UBERON:0001282,3.31e-09,1;UBERON:0009842,3.31e-09,1;UBERON:0003704,3.31e-09,1;UBERON:0001171,3.31e-09,1;UBERON:0001172,3.31e-09,1;UBERON:0001136,3.58e-09,1;UBERON:0001343,3.58e-09,1;UBERON:0004910,3.58e-09,1;UBERON:0005154,3.58e-09,1;UBERON:0005295,3.58e-09,1;UBERON:0004813,3.58e-09,1;UBERON:0005297,3.58e-09,1;UBERON:0005294,3.58e-09,1;UBERON:0010141,3.58e-09,1;UBERON:0005891,3.58e-09,1;UBERON:0000989,4.19e-09,1;UBERON:0008811,4.19e-09,1;UBERON:0006258,4.19e-09,1;UBERON:0005876,4.19e-09,1;UBERON:0004874,4.19e-09,1;UBERON:0002171,5.31e-09,1;UBERON:0006518,5.31e-09,1;UBERON:0008949,5.31e-09,1;UBERON:0000101,5.31e-09,1;UBERON:0002167,5.31e-09,1;UBERON:0005256,1.84e-08,122;UBERON:0003929,3.23e-08,54;UBERON:0005172,3.23e-08,54;UBERON:0005173,3.23e-08,54;UBERON:0003914,1.80e-07,117;UBERON:0001041,2.60e-07,87;UBERON:0002417,2.75e-07,60;UBERON:0000916,2.75e-07,60;UBERON:0003834,2.88e-07,5;UBERON:0001533,2.88e-07,5 | |||
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| ||
|short_description=p16@C3 | |||
}} | }} |
Latest revision as of 17:59, 24 September 2015
Short description: | p16@C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_C3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -394bp_to_ENST00000475508_5end |
EntrezGene: | C3 |
HGNC: | 1318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.48e-23 | 12 |
androgen binding protein secreting cell | 3.58e-09 | 1 |
seminiferous tubule epithelial cell | 3.58e-09 | 1 |
Sertoli cell | 3.58e-09 | 1 |
smooth muscle cell of the subclavian artery | 2.88e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.07e-08 | 1 |