FFCP PHASE1:Hg19::chr11:2017178..2017212,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283120 | |EntrezGene=283120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_BC106078_5end | |association_with_transcript=5bp_to_BC106078_5end | ||
|cluster_id=chr11:2017178..2017212,- | |||
|coexpression_cluster_id=C227 | |coexpression_cluster_id=C227 | ||
|description=CAGE_peak_16_at_H19_5end | |description=CAGE_peak_16_at_H19_5end | ||
|id=chr11:2017178..2017212,- | |id=chr11:2017178..2017212,- | ||
|ontology_enrichment_celltype=CL:0000349;4.39e-16;19!CL:0002577;2.81e-07;3!CL:0002541;3.46e-07;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000349;4.39e-16;19!CL:0002577;2.81e-07;3!CL:0002541;3.46e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.20e-16,19;CL:0002577,2.81e-07,3;CL:0002541,3.57e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.40e-07;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001737;1.65e-16;9!UBERON:0001557;1.65e-16;9!UBERON:0000478;2.60e-16;24!UBERON:0005631;6.30e-13;10!UBERON:0000158;6.30e-13;10!UBERON:0001134;2.03e-11;16!UBERON:0002036;2.03e-11;16!UBERON:0001987;5.43e-09;4!UBERON:0000305;9.34e-08;7!UBERON:0000922;1.67e-07;49!UBERON:0003124;3.46e-07;3!UBERON:0000920;3.46e-07;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.40e-12!14;UBERON:0000158!7.40e-12!14;UBERON:0001737!2.71e-10!9;UBERON:0001557!4.88e-10!19;UBERON:0000478!5.67e-10!24;UBERON:0003124!4.10e-09!7;UBERON:0004923!1.54e-08!57;UBERON:0003104!2.83e-08!238;UBERON:0009142!2.83e-08!238;UBERON:0000481!5.64e-07!347;UBERON:0003103!6.65e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.65e-16;9!UBERON:0001557;1.65e-16;9!UBERON:0000478;2.60e-16;24!UBERON:0005631;6.30e-13;10!UBERON:0000158;6.30e-13;10!UBERON:0001134;2.03e-11;16!UBERON:0002036;2.03e-11;16!UBERON:0001987;5.43e-09;4!UBERON:0000305;9.34e-08;7!UBERON:0000922;1.67e-07;49!UBERON:0003124;3.46e-07;3!UBERON:0000920;3.46e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.11e-20,14;UBERON:0000158,5.11e-20,14;UBERON:0001737,1.57e-16,9;UBERON:0000478,2.45e-16,24;UBERON:0003124,1.65e-14,7;UBERON:0001557,2.11e-12,19;UBERON:0001987,5.28e-09,4;UBERON:0004340,5.28e-09,4;UBERON:0000305,9.36e-08,7;UBERON:0000920,3.57e-07,3 | |||
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| ||
|short_description=p16@H19 | |short_description=p16@H19 | ||
}} | }} |
Latest revision as of 06:20, 17 September 2015
Short description: | p16@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 5bp_to_BC106078_5end |
EntrezGene: | H19 |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.20e-16 | 19 |
placental epithelial cell | 2.81e-07 | 3 |
chorionic membrane mesenchymal stem cell | 3.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.11e-20 | 14 |
membranous layer | 5.11e-20 | 14 |
larynx | 1.57e-16 | 9 |
extraembryonic structure | 2.45e-16 | 24 |
chorion | 1.65e-14 | 7 |
upper respiratory tract | 2.11e-12 | 19 |
placenta | 5.28e-09 | 4 |
allantois | 5.28e-09 | 4 |
amnion | 9.36e-08 | 7 |
egg chorion | 3.57e-07 | 3 |