FFCP PHASE1:Hg19::chr4:909047..909097,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:909047..909097,- | |||
|coexpression_cluster_id=C37 | |coexpression_cluster_id=C37 | ||
|description=CAGE_peak_at_chr4:909047..909097,- | |description=CAGE_peak_at_chr4:909047..909097,- | ||
|id=chr4:909047..909097,- | |id=chr4:909047..909097,- | ||
|ontology_enrichment_celltype=CL:0002178;1.93e-07;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002178;1.93e-07;3 | ||
|ontology_enrichment_disease=DOID:8692;3.52e-20;31!DOID:0050619;3.91e-19;1!DOID:1357;3.91e-19;1!DOID:9119;3.91e-19;1!DOID:1240;5.75e-13;39!DOID:3493;1.57e-10;2!DOID:2531;7.26e-10;51!DOID:0060083;7.26e-10;51 | |ontology_enrichment_celltype_v019_2=CL:0002178,1.93e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0001736;2.06e-19;1!UBERON:0001764;3.91e-19;1!UBERON:0001825;3.91e-19;1!UBERON:0001044;3.66e-13;6!UBERON:0003293;3.66e-13;6!UBERON:0003294;3.66e-13;6!UBERON:0010047;3.66e-13;6!UBERON:0003408;3.66e-13;6!UBERON:0000167;3.66e-13;6!UBERON:0001041;2.05e-12;14!UBERON:0001829;2.17e-10;2 | |ontology_enrichment_development_v019=UBERON:0006298;2.06e-19;1 | ||
|ontology_enrichment_disease=DOID:8692!4.96e-22!31;DOID:1240!1.43e-18!39;DOID:2531!4.88e-13!51;DOID:0060083!4.88e-13!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.52e-20;31!DOID:0050619;3.91e-19;1!DOID:1357;3.91e-19;1!DOID:9119;3.91e-19;1!DOID:1240;5.75e-13;39!DOID:3493;1.57e-10;2!DOID:2531;7.26e-10;51!DOID:0060083;7.26e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.03e-20,31;DOID:0050619,2.71e-19,1;DOID:1357,2.71e-19,1;DOID:9119,3.25e-19,1;DOID:1240,1.87e-16,39;DOID:2531,1.46e-12,51;DOID:0060083,1.46e-12,51;DOID:3493,1.57e-10,2;DOID:0050686,7.12e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.30e-21!115;UBERON:0001049!1.56e-16!57;UBERON:0005068!1.56e-16!57;UBERON:0006241!1.56e-16!57;UBERON:0007135!1.56e-16!57;UBERON:0002616!3.49e-14!59;UBERON:0001893!1.86e-12!34;UBERON:0000955!2.53e-12!69;UBERON:0006238!2.53e-12!69;UBERON:0002020!3.21e-12!34;UBERON:0003528!3.21e-12!34;UBERON:0000033!3.48e-12!123;UBERON:0001869!1.59e-11!32;UBERON:0002780!2.16e-11!41;UBERON:0001890!2.16e-11!41;UBERON:0006240!2.16e-11!41;UBERON:0000153!2.92e-11!129;UBERON:0007811!2.92e-11!129;UBERON:0002791!4.82e-11!33;UBERON:0003080!4.89e-11!42;UBERON:0001017!1.21e-10!82;UBERON:0005743!6.75e-10!86;UBERON:0002346!1.59e-09!90;UBERON:0000073!2.47e-09!94;UBERON:0001016!2.47e-09!94;UBERON:0000956!3.39e-09!25;UBERON:0000203!3.39e-09!25;UBERON:0003075!4.16e-09!86;UBERON:0007284!4.16e-09!86;UBERON:0002619!7.89e-09!22;UBERON:0001950!5.44e-08!20;UBERON:0000988!9.39e-08!3;UBERON:0002298!2.37e-07!8;UBERON:0000924!4.71e-07!173;UBERON:0006601!4.71e-07!173;UBERON:0003076!5.20e-07!15;UBERON:0003057!5.20e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001736;2.06e-19;1!UBERON:0001764;3.91e-19;1!UBERON:0001825;3.91e-19;1!UBERON:0001044;3.66e-13;6!UBERON:0003293;3.66e-13;6!UBERON:0003294;3.66e-13;6!UBERON:0010047;3.66e-13;6!UBERON:0003408;3.66e-13;6!UBERON:0000167;3.66e-13;6!UBERON:0001041;2.05e-12;14!UBERON:0001829;2.17e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,1.88e-19,1;UBERON:0006298,1.88e-19,1;UBERON:0001764,2.71e-19,1;UBERON:0001825,2.71e-19,1;UBERON:0001044,3.55e-13,6;UBERON:0003293,3.55e-13,6;UBERON:0003294,3.55e-13,6;UBERON:0010047,3.55e-13,6;UBERON:0000167,3.55e-13,6;UBERON:0001829,2.07e-10,2;UBERON:0003408,2.82e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0.199579371432817,0.766021480529467,5.29183956809707,3.57084134302011,0,0.912938716132769,0,0,0.677167111206413,0.642352300414798,0,0,0,2.15068535015921,0.223676107892416,0.333698283423817,0,0,1.23087398947712,1.08182271390393,1.33228787199128,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0.498635045700469,0,0,0,0,0.476809736941136,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,1.88464915500281,0,0.122026264901963,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2754495206101,0,0,0,0.552032215008773,0,0,0,0.192687675289379,0,0.319267718114302,0,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.405225507710368,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.135939465953663,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7672754822489,0,0.0852134047591577,0,0,0,0,0,8.24461962368041,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,2.2936464170227,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0.435433495793923,0.684466602170562,0.0673520530145875,0.358611026963382,0.665320713092027,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0.199579371432817,0.766021480529467,5.29183956809707,3.57084134302011,0,0.912938716132769,0,0,0.677167111206413,0.642352300414798,0,0,0,2.15068535015921,0.223676107892416,0.333698283423817,0,0,1.23087398947712,1.08182271390393,1.33228787199128,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0.498635045700469,0,0,0,0,0.476809736941136,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,1.88464915500281,0,0.122026264901963,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2754495206101,0,0,0,0.552032215008773,0,0,0,0.192687675289379,0,0.319267718114302,0,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.405225507710368,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.135939465953663,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7672754822489,0,0.0852134047591577,0,0,0,0,0,8.24461962368041,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,2.2936464170227,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0.435433495793923,0.684466602170562,0.0673520530145875,0.358611026963382,0.665320713092027,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr4:909047..909097,- | |short_description=p@chr4:909047..909097,- | ||
}} | }} |
Latest revision as of 08:03, 30 July 2015
Short description: | p@chr4:909047..909097, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:909047..909097, - |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 1.88e-19 | 1 |
submandibular gland primordium | 1.88e-19 | 1 |
maxillary sinus | 2.71e-19 | 1 |
paranasal sinus | 2.71e-19 | 1 |
saliva-secreting gland | 3.55e-13 | 6 |
gland of oral region | 3.55e-13 | 6 |
gland of foregut | 3.55e-13 | 6 |
oral gland | 3.55e-13 | 6 |
oral cavity | 3.55e-13 | 6 |
major salivary gland | 2.07e-10 | 2 |
gland of gut | 2.82e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.03e-20 | 31 |
paranasal sinus cancer | 2.71e-19 | 1 |
maxillary sinus cancer | 2.71e-19 | 1 |
acute myeloid leukemia | 3.25e-19 | 1 |
leukemia | 1.87e-16 | 39 |
hematologic cancer | 1.46e-12 | 51 |
immune system cancer | 1.46e-12 | 51 |
signet ring cell adenocarcinoma | 1.57e-10 | 2 |
organ system cancer | 7.12e-08 | 137 |