FFCP PHASE1:Hg19::chr12:54333631..54333648,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-204bp_to_ENST00000512916_5end | |association_with_transcript=-204bp_to_ENST00000512916_5end | ||
|cluster_id=chr12:54333631..54333648,- | |||
|description=CAGE_peak_1_at_ENST00000512916_5end | |description=CAGE_peak_1_at_ENST00000512916_5end | ||
|id=chr12:54333631..54333648,- | |id=chr12:54333631..54333648,- | ||
|ontology_enrichment_celltype=CL:0002617;1.30e-18;2!CL:0002615;5.18e-13;3!CL:0000515;1.89e-12;3!CL:0000136;3.40e-11;13!CL:0002251;1.21e-10;20!CL:0000056;1.45e-09;4!CL:0002327;1.45e-09;4 | |ontology_enrichment_celltype=CL:0000066!1.89e-16!254;CL:0000076!1.42e-09!62;CL:0000077!8.03e-08!19;CL:0002150!1.01e-07!3;CL:0000861!1.01e-07!3;CL:0002615!1.13e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002617;1.30e-18;2!CL:0002615;5.18e-13;3!CL:0000515;1.89e-12;3!CL:0000136;3.40e-11;13!CL:0002251;1.21e-10;20!CL:0000056;1.45e-09;4!CL:0002327;1.45e-09;4 | ||
|ontology_enrichment_disease=DOID:3151;5.78e-10;1!DOID:3149;5.78e-10;1 | |ontology_enrichment_celltype_v019_2=CL:0002617,7.03e-19,2;CL:0002615,5.19e-13,3;CL:0002251,1.46e-10,20;CL:0000136,8.61e-10,15;CL:0002327,1.12e-09,4;CL:0000515,1.73e-09,4 | ||
|ontology_enrichment_uberon=UBERON:0003343;5.94e-20;4!UBERON:0004785;5.94e-20;4!UBERON:0000974;1.66e-13;6!UBERON:0001911;1.45e-09;4!UBERON:0000310;1.96e-08;10!UBERON:0001443;1.04e-07;11!UBERON:0003688;6.27e-07;6!UBERON:0002358;6.27e-07;6!UBERON:0003684;6.27e-07;6!UBERON:0001178;6.27e-07;6 | |ontology_enrichment_development_v019=CL:0000515;1.45e-09;4 | ||
|ontology_enrichment_disease=DOID:162!2.19e-25!235;DOID:0050687!3.64e-25!143;DOID:14566!1.82e-24!239;DOID:305!4.49e-20!106;DOID:1749!1.65e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;5.78e-10;1!DOID:3149;5.78e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,7.55e-10,1;DOID:3149,7.55e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.53e-14!9;UBERON:0000310!5.10e-10!10;UBERON:0001443!5.46e-09!11;UBERON:0001557!1.72e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;5.94e-20;4!UBERON:0004785;5.94e-20;4!UBERON:0000974;1.66e-13;6!UBERON:0001911;1.45e-09;4!UBERON:0000310;1.96e-08;10!UBERON:0001443;1.04e-07;11!UBERON:0003688;6.27e-07;6!UBERON:0002358;6.27e-07;6!UBERON:0003684;6.27e-07;6!UBERON:0001178;6.27e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,8.81e-20,4;UBERON:0004785,8.81e-20,4;UBERON:0001911,1.12e-09,4;UBERON:0005333,1.12e-09,4;UBERON:0008425,1.12e-09,4;UBERON:0005311,1.12e-09,4;UBERON:0000310,1.64e-08,10;UBERON:0000974,3.01e-08,10;UBERON:0001443,8.83e-08,11;UBERON:0003688,6.27e-07,6;UBERON:0002358,6.27e-07,6;UBERON:0003684,6.27e-07,6;UBERON:0001178,6.27e-07,6 | |||
|phase1_expression=2.18014055124668,1.92690471501885,2.53717927372748,2.00146596706261,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,0.168584690078102,0.723033089650446,0.55146986366197,1.08939722046203,0.71181185733329,0.404493924480493,0.588664395376038,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.219500570817251,0,0.301586917234893,0,0,0,0,0,0,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0,0,1.61205340865127,0.290633938513962,1.91691339582606,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,1.64381058040307,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0,0,0,0,0,0,0,0.241718899183244,0.40101294060657,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0.32681539055697,1.95193241990045,0,0,0,0.179515288819544,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,2.1045278718029,0,0,0,0,0,0,0.138674673013139,0,0.391969589657511,0,0,0,1.16107597546902,4.23918039099876,0.821154570532092,0,0.0882561266915003,0,0.137041924646751,0,0,0.391102765469606,0,0,1.39866726707491,0,0.114536596165916,0,0,0.248505071130865,0.707082103850386,0.135904206073614,0.313808538937,0.713987523454252,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,1.34173875039706,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,2.04035332961045,0.926089897295336,0.489473409012935,0.71635536432595,0.308801447160972,1.97355644620836,0,0,0,0,1.72715170865599,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.509197589862076,0,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66851121451744,0,1.28400018965175,1.27078232765372,0,0,0,0,0,0,0.523813388962845,0,0.147856086217045,0,0,0,0,0,0,0,0,1.40538670403555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0.116241425368125,0.347716544605159,0,0,0.3414369541879,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.892769693028288,0,0.641930933513346,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=2.18014055124668,1.92690471501885,2.53717927372748,2.00146596706261,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,0.168584690078102,0.723033089650446,0.55146986366197,1.08939722046203,0.71181185733329,0.404493924480493,0.588664395376038,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.219500570817251,0,0.301586917234893,0,0,0,0,0,0,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0,0,1.61205340865127,0.290633938513962,1.91691339582606,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,1.64381058040307,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0,0,0,0,0,0,0,0.241718899183244,0.40101294060657,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0.32681539055697,1.95193241990045,0,0,0,0.179515288819544,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,2.1045278718029,0,0,0,0,0,0,0.138674673013139,0,0.391969589657511,0,0,0,1.16107597546902,4.23918039099876,0.821154570532092,0,0.0882561266915003,0,0.137041924646751,0,0,0.391102765469606,0,0,1.39866726707491,0,0.114536596165916,0,0,0.248505071130865,0.707082103850386,0.135904206073614,0.313808538937,0.713987523454252,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,1.34173875039706,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,2.04035332961045,0.926089897295336,0.489473409012935,0.71635536432595,0.308801447160972,1.97355644620836,0,0,0,0,1.72715170865599,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.509197589862076,0,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66851121451744,0,1.28400018965175,1.27078232765372,0,0,0,0,0,0,0.523813388962845,0,0.147856086217045,0,0,0,0,0,0,0,0,1.40538670403555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0.116241425368125,0.347716544605159,0,0,0.3414369541879,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.892769693028288,0,0.641930933513346,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000512916 | |short_description=p1@ENST00000512916 | ||
}} | }} |
Latest revision as of 09:55, 24 July 2015
Short description: | p1@ENST00000512916 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000512916_5end |
Coexpression cluster: | NA |
Association with transcript: | -204bp_to_ENST00000512916_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 7.03e-19 | 2 |
adipocyte of omentum tissue | 5.19e-13 | 3 |
epithelial cell of alimentary canal | 1.46e-10 | 20 |
fat cell | 8.61e-10 | 15 |
mammary gland epithelial cell | 1.12e-09 | 4 |
skeletal muscle myoblast | 1.73e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 8.81e-20 | 4 |
respiratory system mucosa | 8.81e-20 | 4 |
mammary gland | 1.12e-09 | 4 |
mammary bud | 1.12e-09 | 4 |
mammary ridge | 1.12e-09 | 4 |
mammary placode | 1.12e-09 | 4 |
breast | 1.64e-08 | 10 |
neck | 3.01e-08 | 10 |
chest | 8.83e-08 | 11 |
omentum | 6.27e-07 | 6 |
peritoneum | 6.27e-07 | 6 |
abdominal cavity | 6.27e-07 | 6 |
visceral peritoneum | 6.27e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 7.55e-10 | 1 |
keratoacanthoma | 7.55e-10 | 1 |