FFCP PHASE1:Hg19::chr19:41129567..41129584,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:41129567..41129584,+ | |||
|description=CAGE_peak_at_chr19:41129567..41129584,+ | |description=CAGE_peak_at_chr19:41129567..41129584,+ | ||
|id=chr19:41129567..41129584,+ | |id=chr19:41129567..41129584,+ | ||
|ontology_enrichment_celltype=CL:0000317;3.16e-10;2!CL:1000448;3.16e-10;2!CL:0002308;3.16e-10;2!CL:0002140;3.16e-10;2!CL:0002622;9.54e-08;3!CL:0002567;2.27e-07;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000317;3.16e-10;2!CL:1000448;3.16e-10;2!CL:0002308;3.16e-10;2!CL:0002140;3.16e-10;2!CL:0002622;9.54e-08;3!CL:0002567;2.27e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000317,3.04e-10,2;CL:1000448,3.04e-10,2;CL:0002308,3.04e-10,2;CL:0002140,3.04e-10,2;CL:0002622,1.07e-07,3;CL:0002567,2.32e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002419;3.16e-10;2!UBERON:0007771;3.16e-10;2!UBERON:0003297;3.16e-10;2!UBERON:0001821;3.16e-10;2!UBERON:0003487;3.16e-10;2!UBERON:0001820;3.16e-10;2!UBERON:0003937;3.29e-10;12!UBERON:0005399;3.29e-10;12!UBERON:0003101;1.38e-07;22!UBERON:0000079;1.38e-07;22!UBERON:0002367;1.52e-07;11!UBERON:0010147;1.52e-07;11 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003101!2.45e-09!22;UBERON:0000079!2.45e-09!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;3.16e-10;2!UBERON:0007771;3.16e-10;2!UBERON:0003297;3.16e-10;2!UBERON:0001821;3.16e-10;2!UBERON:0003487;3.16e-10;2!UBERON:0001820;3.16e-10;2!UBERON:0003937;3.29e-10;12!UBERON:0005399;3.29e-10;12!UBERON:0003101;1.38e-07;22!UBERON:0000079;1.38e-07;22!UBERON:0002367;1.52e-07;11!UBERON:0010147;1.52e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003937,2.73e-10,12;UBERON:0005399,2.73e-10,12;UBERON:0002419,3.04e-10,2;UBERON:0007771,3.04e-10,2;UBERON:0003297,3.04e-10,2;UBERON:0001821,3.04e-10,2;UBERON:0003487,3.04e-10,2;UBERON:0001820,3.04e-10,2;UBERON:0005089,3.04e-10,2;UBERON:0005088,3.04e-10,2;UBERON:0003101,1.18e-07,22;UBERON:0000079,1.18e-07,22;UBERON:0002367,1.66e-07,11;UBERON:0010147,1.66e-07,11;UBERON:0009846,1.66e-07,11;UBERON:0003353,1.66e-07,11;UBERON:0004902,1.66e-07,11;UBERON:0003820,1.66e-07,11;UBERON:0009847,1.66e-07,11;UBERON:0000161,2.56e-07,36 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0.872338524100369,0,0,0.783556884599516,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0.410623275218653,0,0.0764134057479513,0,0,0,0,0,0,0.6024118375565,1.47901604066715,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0.641858054152187,0,0,0.398927315243264,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0.334372990781356,0,0,0,0.334231370655521,0,0,0,0.25618263945135,0.130059347559878,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0,0,0,0,0.361439152384566,0,1.30361867064741,1.5905718941022,0.486634870302636,0.0945348171640679,0,0,0.196468613246569,0.364295288292542,0.741568885568859,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0.488124115096339,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0,1.06748995729705,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.597794722207204,0.469737994575059,0,0,0,0.245668634623536,0.929932030581889,1.18800285728205,2.22540236350701,0,1.43723628363248,0,0.375355559615893,0,0,0,0.600952235626387,0,0,0,0,0,0.412210116953756,0,0.37223371266318,0,0.0974370051611986,0,0.0920498986422993,1.2931684545505,0.355009592516614,0,0,0,0.818238361772504,0,0.243947412259191,0,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0.269662616320329,0,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0.245976877086227,0.171567810298526,0.878002283269004,1.1240175325762,0.703702806881416,0.0925884451585296,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0.234004265139238,0,0,0.335964256397719,0,0.179117045405697,0.290633938513962,0.383382679165211,0.985326475791887,0.088048434013226,0.414656231081544,0.720599767084807,1.13618190083742,0,1.14596527667483,2.34434894420094,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,0.797814349754612,2.08014873822732,0.257207374262142,0,0,0,1.08524321078289,0,0,0,0,0.602878754119172,0,0.399891964728228,0,0,0,0,2.29723871668228,0,0,0,0,0,0,1.2937654491571,0.385029108839245,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.12269149171914,2.00068208423871,0,0,0.178428988797162,0.630809660135739,0,1.50473049863859,2.27407504055985,0,0,0.184369168541703,0.434418072340414,0.391602314925481,0.343143423810856,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0.30239029332968,0,0,0.561320188866147,0.128139149255701,0.511707249066704,0,1.48418066444991,0.925258162815933,0,0.246381468041427,0.519254429183621,0.116210378459959,0.362578348774867,4.0101294060657,0.460404944679482,0.114814448164607,2.00300284807389,6.16284750309293,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,1.14853107599234,1.30012049207304,0,0,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.426133137080504,0.0890320356467374,0.826424576804891,0.384380134730212,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0,1.06461206063404,0,0,0,0,0,0.190630193923825,0,0,0.636406495851874,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,2.12108147930569,0,0.551365343546124,0,0,0,0.655894752046633,0.405820753925408,0,0.281695602532241,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0.379473173765715,0.349934720244983,0.577332676353072,0.670302275535787,1.08890984861323,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0.19538809540204,0.278406173895242,0,0.811367035427949,0,0,0,0.146508179271894,0,0.111443384277478,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0.779160935160341,0,0.211125408127993,1.39473591775749,1.10513566212459,0,0.102268682502155,0,0.311039587661807,0,0,0,0.690503839458535,0,0,0,0.0927680981618513,0,0,0,0,0,0.762760950878299,0,0,0.583209226766509,0,0,0,0,0,0,0,0.21787692703798,0,1.00035336054936,0,0,0.179515288819544,0.108647371922008,0.31900115973192,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0.158936578980379,0.421996129056054,0,0,0.216388639742091,0,0.619202951523374,0,0,0,0,0,0,0.234264445725339,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0.698906672968121,0,0,0.146178634172371,0.164230914106418,0.484945082442097,0.0882561266915003,0.451961481561065,0,0,0,0,0.160317640503067,0,0.19980960958213,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,1.11712960508902,0,0,0,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0.0787831823072236,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0.121499113316049,0.335434687599266,0,0.104909176269996,0.211200673038813,0,0,0,0,0.25426853765475,0.542999601753713,0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|short_description=p@chr19:41129567..41129584,+ | |short_description=p@chr19:41129567..41129584,+ | ||
}} | }} |
Latest revision as of 07:55, 26 July 2015
Short description: | p@chr19:41129567..41129584, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:41129567..41129584, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 3.04e-10 | 2 |
epithelial cell of sweat gland | 3.04e-10 | 2 |
epithelial cell of skin gland | 3.04e-10 | 2 |
acinar cell of sebaceous gland | 3.04e-10 | 2 |
prostate stromal cell | 1.07e-07 | 3 |
light melanocyte | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
sex gland | 2.73e-10 | 12 |
male reproductive gland | 2.73e-10 | 12 |
skin gland | 3.04e-10 | 2 |
epidermis gland | 3.04e-10 | 2 |
gland of integumental system | 3.04e-10 | 2 |
sebaceous gland | 3.04e-10 | 2 |
skin sebaceous gland | 3.04e-10 | 2 |
sweat gland | 3.04e-10 | 2 |
sweat gland placode | 3.04e-10 | 2 |
sebaceous gland placode | 3.04e-10 | 2 |
male organism | 1.18e-07 | 22 |
male reproductive system | 1.18e-07 | 22 |
prostate gland | 1.66e-07 | 11 |
male accessory sex gland | 1.66e-07 | 11 |
embryonic cloacal epithelium | 1.66e-07 | 11 |
epithelium of hindgut | 1.66e-07 | 11 |
urogenital sinus epithelium | 1.66e-07 | 11 |
prostate bud | 1.66e-07 | 11 |
prostate field | 1.66e-07 | 11 |
orifice | 2.56e-07 | 36 |