FFCP PHASE1:Hg19::chr15:63353058..63353095,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7168 | |EntrezGene=7168 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12010 | |HGNC=12010 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-337bp_to_ENST00000561242_5end | |association_with_transcript=-337bp_to_ENST00000561242_5end | ||
|cluster_id=chr15:63353058..63353095,+ | |||
|coexpression_cluster_id=C1041 | |coexpression_cluster_id=C1041 | ||
|description=CAGE_peak_10_at_TPM1_5end | |description=CAGE_peak_10_at_TPM1_5end | ||
|id=chr15:63353058..63353095,+ | |id=chr15:63353058..63353095,+ | ||
|ontology_enrichment_celltype=CL:0000359;3.50e-11;32 | |ontology_enrichment_celltype=CL:0000055!1.78e-13!180;CL:0000359!6.92e-10!32;CL:0000192!1.00e-07!42;CL:0000514!1.00e-07!42;CL:0000057!2.41e-07!75;CL:0000077!3.65e-07!19 | ||
| | |ontology_enrichment_celltype_v019=CL:0000359;3.50e-11;32 | ||
|ontology_enrichment_disease=DOID:2394;5.56e-07;14 | |ontology_enrichment_celltype_v019_2=CL:0000359,1.43e-11,32;CL:0000192,6.34e-08,43;CL:0000514,6.34e-08,43 | ||
|ontology_enrichment_uberon=UBERON:0007100;2.48e-08;25 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;5.56e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.92e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!5.84e-09!84;UBERON:0000481!1.44e-08!347;UBERON:0002049!5.80e-08!79;UBERON:0007798!5.80e-08!79;UBERON:0005256!8.42e-08!143;UBERON:0001637!8.99e-08!42;UBERON:0003509!8.99e-08!42;UBERON:0004572!8.99e-08!42;UBERON:0001981!1.82e-07!60;UBERON:0007500!1.82e-07!60;UBERON:0004537!1.82e-07!60;UBERON:0006965!1.82e-07!60;UBERON:0007100!2.05e-07!27;UBERON:0002385!2.31e-07!63;UBERON:0001015!2.31e-07!63;UBERON:0000383!2.31e-07!63;UBERON:0001009!5.10e-07!113;UBERON:0000914!7.25e-07!83;UBERON:0002329!7.25e-07!83;UBERON:0003077!7.25e-07!83;UBERON:0003059!7.25e-07!83;UBERON:0007282!7.25e-07!83;UBERON:0009618!7.25e-07!83;UBERON:0007285!7.25e-07!83;UBERON:0001134!7.47e-07!61;UBERON:0002036!7.47e-07!61;UBERON:0003082!7.47e-07!61;UBERON:0005156!8.02e-07!59;UBERON:0000990!8.02e-07!59;UBERON:0000055!8.51e-07!69;UBERON:0000468!9.18e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.48e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.53e-09,27;UBERON:0001637,3.78e-08,42;UBERON:0003509,3.78e-08,42;UBERON:0004572,3.78e-08,42;UBERON:0004872,5.02e-08,83;UBERON:0003104,6.34e-08,160;UBERON:0009142,6.34e-08,160;UBERON:0005256,1.16e-07,122;UBERON:0002385,3.08e-07,64;UBERON:0001015,3.08e-07,64;UBERON:0000383,3.08e-07,64;UBERON:0002049,5.37e-07,78;UBERON:0007798,5.37e-07,78;UBERON:0004573,5.41e-07,33;UBERON:0004571,5.41e-07,33;UBERON:0007500,5.61e-07,59;UBERON:0001981,5.61e-07,59;UBERON:0004537,5.61e-07,59;UBERON:0006965,5.61e-07,59;UBERON:0001134,5.74e-07,62;UBERON:0002036,5.74e-07,62;UBERON:0003082,5.74e-07,62;UBERON:0001009,6.08e-07,112 | |||
|phase1_expression=2.54349730978779,6.42301571672949,2.39622486963151,5.00366491765652,4.02264984984559,5.23403114460221,0,0,0,0.245733936501509,1.39560233594486,0.218441372130172,1.84636884759917,0.123766352960047,0,11.4295274896802,5.42425075221579,8.03341099426111,4.87932798790507,0.738726348460727,0.408001382488506,0.940364164434263,0.572471974262113,1.09499540058307,2.51085279189606,0,0,0,0,0,0.77408061658038,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,1.44575660953827,3.00802746381534,2.02785126545153,0.795285947051099,1.94653948121054,2.26883561193763,7.31707011626461,5.88493064143945,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0.825354125820202,0.417989933073621,0.516833518338658,0.71153252537342,0.66944122552934,0,0,0.24406205754817,0,1.62028389576352,0.357198913136319,0.22452937262617,0,0,0.949265659568129,0.183201743930407,0,0,0,11.4303548889923,2.02608818663328,1.05927344650575,1.43418310374407,0.709336764396714,2.80338800071154,7.47242970107935,6.66002380726332,0.311211035399766,0.808264032418128,0.326923806226917,0.302714855289863,0,0,0,0.570471821544449,0.298897361103602,0,0.323745888736263,0.140450806702248,0,0.859840221182376,0.206651562351531,1.18800285728205,1.7308685049499,0,0,0.168336113954066,0.375355559615893,0,2.19488810440419,9.80760946556863,2.25357088359895,1.81491493056034,2.87023417102179,0.427114777637135,1.05965950579781,0.900273288253207,0.721367704669072,1.8034837803194,1.11670113798954,1.18143432568886,4.77441325289873,2.01947019395292,0.828449087780694,0,3.55009592516614,4.13083602733325,1.3564847384839,0.57978255948989,0.272746120590835,0.573609190778008,1.46368447355514,1.06023814657188,0.69716365721711,1.34759371519982,0.756962552626885,0.36497735907583,1.56449532329816,2.57296375277154,1.38134921352481,0.928735856063958,0,0.946454400318751,0.674338760312407,1.20505514941741,0.55146986366197,0.871517776369625,0.71181185733329,0.539325232640658,0,1.53898862778556,0,1.40241773803446,1.6462960453256,1.47008711385542,0,0,0,0,0.122988438543114,1.20097467208968,0.768251997860379,0,0.100528972411631,0,0,0,2.88662684050547,0.695582429850461,1.6437217193015,0.433099343283221,2.31492756288305,0.570762456703795,0,0.858486162094873,0,0,0,0,2.18376766658517,0.567100388969546,0,0.871901815541886,1.15014803749563,0,0,0,0,0,0,0.381988425558278,0,1.71072446022705,0.411309970813294,0,0,0,0.87192013766656,0.22001485746285,1.42198887333556,0,0.845302752556,3.19125739901845,3.12022310734098,0,0,0,1.00084595560703,0,0.823240336780769,0,1.77695974371273,0.791951872933429,1.20575750823834,0.871533458600294,9.49743416229542,0,0,0,3.59437283237374,6.89171615004683,0,1.73737568001095,1.84928690295345,1.07436577943937,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,1.50051156317903,0.542530047399471,5.61521326133179,10.8841683166269,2.83864347061082,1.7571212248907,0,4.5481500811197,0,3.32112799267718,2.58116835958384,0.260650843404249,0,0,0,0,0,0.606255142892519,0,3.93107381328584,0.496215615637554,1.99500565274481,9.5424432107245,1.28139149255701,4.09365799253363,5.95159508231348,2.96836132889982,4.31787142647436,2.66342587969691,0.657017248110473,2.07701771673448,1.16210378459959,0.120859449591622,2.80709058424599,0.460404944679482,1.03333003348146,1.45672934405374,1.83574180943194,0.902399225814824,1.69433741629712,0,0,2.74434235121477,0,0.510281115829547,2.37507507712353,0,1.35473218771926,1.00337954770971,0,0,0.671624264166535,0.438519753291869,0,0.769350375349168,0.984043937099117,0.976135183992909,0.103041011647722,0.732555718546747,0.165018999841176,0.574265537996172,1.30012049207304,3.21367859688319,0,0.308097234229289,0.307007349452259,0,0.107420244868274,0,0.511359764496605,0.356128142586949,1.15699440752685,3.2672311452068,0,0.4046311234222,4.64845549297286,1.25924938732256,0.6970372701606,1.23213432070436,0.532306030317022,0,2.40921484835096,9.7324922984554,1.86079184679834,1.2655176988749,3.62197368455267,0,0,0,12.5591782431877,1.43897966066652,0.274537029736055,2.23843564456804,1.2130948894399,4.75530963519025,1.68503382495592,0,2.43713489631284,2.11300293513511,0.818999468447914,0.707027159768564,1.13008116620243,0.551365343546124,5.30751180192976,6.13831239355268,0,0,1.62328301570163,4.3375289733965,3.94373843545138,0.430234056612155,1.3754865741837,1.78335525740625,0.354761064070598,0.211107635297664,1.64647446479951,0,0,0.0962221127255121,0,1.08890984861323,0.376575203107117,0.43050537267123,0,1.33029046061003,0.459446800413919,0.507447609232169,0.764637207142375,0,0,0,0,0,0,1.81600920916704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0.18714054040822,0.73254089635947,0.242721043499027,0,0,0.71623345421307,5.93929361665277,0.614321404198464,0,0.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| ||
|short_description=p10@TPM1 | |short_description=p10@TPM1 | ||
}} | }} |
Latest revision as of 11:44, 18 September 2015
Short description: | p10@TPM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TPM1_5end |
Coexpression cluster: | C1041_heart_hepatic_left_mesodermal_smooth_spindle_skeletal |
Association with transcript: | -337bp_to_ENST00000561242_5end |
EntrezGene: | TPM1 |
HGNC: | 12010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.43e-11 | 32 |
smooth muscle cell | 6.34e-08 | 43 |
smooth muscle myoblast | 6.34e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 8.53e-09 | 27 |
artery | 3.78e-08 | 42 |
arterial blood vessel | 3.78e-08 | 42 |
arterial system | 3.78e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 5.02e-08 | 83 |
mesenchyme | 6.34e-08 | 160 |
entire embryonic mesenchyme | 6.34e-08 | 160 |
trunk mesenchyme | 1.16e-07 | 122 |
muscle tissue | 3.08e-07 | 64 |
musculature | 3.08e-07 | 64 |
musculature of body | 3.08e-07 | 64 |
vasculature | 5.37e-07 | 78 |
vascular system | 5.37e-07 | 78 |
systemic artery | 5.41e-07 | 33 |
systemic arterial system | 5.41e-07 | 33 |
epithelial tube open at both ends | 5.61e-07 | 59 |
blood vessel | 5.61e-07 | 59 |
blood vasculature | 5.61e-07 | 59 |
vascular cord | 5.61e-07 | 59 |
skeletal muscle tissue | 5.74e-07 | 62 |
striated muscle tissue | 5.74e-07 | 62 |
myotome | 5.74e-07 | 62 |
circulatory system | 6.08e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.92e-07 | 14 |