FFCP PHASE1:Hg19::chr6:86200265..86200276,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:86200265..86200276,+ | |||
|coexpression_cluster_id=C1981 | |coexpression_cluster_id=C1981 | ||
|description=CAGE_peak_at_chr6:86200265..86200276,+ | |description=CAGE_peak_at_chr6:86200265..86200276,+ | ||
|id=chr6:86200265..86200276,+ | |id=chr6:86200265..86200276,+ | ||
|ontology_enrichment_celltype=CL:0000346;8.65e-20;3!CL:1000428;8.65e-20;3!CL:0002559;2.82e-12;5 | |ontology_enrichment_celltype=CL:0000057!1.99e-11!75;CL:0000055!5.69e-11!180;CL:0002620!7.81e-08!23 | ||
| | |ontology_enrichment_celltype_v019=CL:0000346;8.65e-20;3!CL:1000428;8.65e-20;3!CL:0002559;2.82e-12;5 | ||
|ontology_enrichment_disease=DOID:0060084;1.15e-43;3!DOID:127;1.15e-43;3!DOID:0060072;5.85e-33;4!DOID:2513;1.78e-15;1!DOID:3451;2.15e-08;2!DOID:4159;2.15e-08;2!DOID:0060122;2.15e-08;2 | |ontology_enrichment_celltype_v019_2=CL:0000346,1.05e-19,3;CL:1000428,1.05e-19,3;CL:0002559,3.16e-12,5 | ||
|ontology_enrichment_uberon=UBERON:0000412;8.65e-20;3!UBERON:0001992;8.65e-20;3!UBERON:0002073;2.82e-12;5!UBERON:0000995;3.09e-08;17!UBERON:0003975;8.31e-08;18!UBERON:0002067;3.24e-07;9!UBERON:0004175;9.21e-07;21 | |ontology_enrichment_development_v019=UBERON:0005795;1.32e-13;10 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.15e-43;3!DOID:127;1.15e-43;3!DOID:0060072;5.85e-33;4!DOID:2513;1.78e-15;1!DOID:3451;2.15e-08;2!DOID:4159;2.15e-08;2!DOID:0060122;2.15e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.94e-44,3;DOID:127,6.94e-44,3;DOID:0060072,4.01e-33,4;DOID:2513,1.34e-15,1;DOID:3451,1.86e-08,2;DOID:4159,1.86e-08,2;DOID:0060122,1.86e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.40e-12!95;UBERON:0002199!5.48e-11!45;UBERON:0002416!5.48e-11!45;UBERON:0002097!2.18e-09!40;UBERON:0000914!7.78e-09!83;UBERON:0002329!7.78e-09!83;UBERON:0003077!7.78e-09!83;UBERON:0003059!7.78e-09!83;UBERON:0007282!7.78e-09!83;UBERON:0009618!7.78e-09!83;UBERON:0007285!7.78e-09!83;UBERON:0000486!4.34e-08!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;8.65e-20;3!UBERON:0001992;8.65e-20;3!UBERON:0002073;2.82e-12;5!UBERON:0000995;3.09e-08;17!UBERON:0003975;8.31e-08;18!UBERON:0002067;3.24e-07;9!UBERON:0004175;9.21e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.05e-19,3;UBERON:0001992,1.05e-19,3;UBERON:0002073,3.16e-12,5;UBERON:0005086,3.16e-12,5;UBERON:0002067,3.45e-07,9;UBERON:0004016,3.45e-07,9;UBERON:0010083,3.45e-07,9;UBERON:0000995,8.60e-07,21 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,2.53299878168311,0,0,0,0,0.218441372130172,0,0,0.331397375727916,0.672325146451775,0,0,0,0,0.408001382488506,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.448346041655403,0.23486899728753,0.485618833104395,0,0.204154171254893,0.859840221182376,0,0,0.247266929278557,0,0,0,0.500474079487857,0,0.438977620880838,0.612975591598039,0.150238058906597,0,0,0.213557388818567,0.211931901159562,0.600182192168805,0.103052529238439,0,0.558350568994769,0.506328996723799,0.194874010322397,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.2933531432838,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.821905290201534,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0.771048469013278,0.177561725313127,0.246381468041427,0,0.348631135379878,0,0,0.184161977871793,0.229628896329213,0.546273504020151,0.262248829918848,0,0,0,0,0.422206515571503,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0,0,0,0.62962469366128,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,1.58510321173008,0,0,0.487426979262569,0,0.272999822815972,0.141405431953713,0,0,1.32687795048244,0.876901770507525,0,0,0.202910376962704,0.30982349809975,0.845086807596724,0,0,0,0,1.89996871767898,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,1.55519793830904,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.160317640503067,0,0,0.144090417154106,0,0,1.00838358591705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,2.17199840701485,1.72844298240254,5.55198512185996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0.189403005275089,0.251567901752575,0.889811221596536,0,0,0,0.147855149989634,0.159296767163702,0.449803112163605,0,0.829412415681711,0.53168342911599,0,0.150257608997218,0.761610424337591,0,0.181848659202559,0.107410557042488,0,1.19428766609585,0.800055529326307,0,0.336749488765919,0,0,0.428883182749851,0,0,0,0.244736704506468,0,0,0,0,0.192914038270915,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0.224263725161227,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,2.53299878168311,0,0,0,0,0.218441372130172,0,0,0.331397375727916,0.672325146451775,0,0,0,0,0.408001382488506,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.448346041655403,0.23486899728753,0.485618833104395,0,0.204154171254893,0.859840221182376,0,0,0.247266929278557,0,0,0,0.500474079487857,0,0.438977620880838,0.612975591598039,0.150238058906597,0,0,0.213557388818567,0.211931901159562,0.600182192168805,0.103052529238439,0,0.558350568994769,0.506328996723799,0.194874010322397,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.2933531432838,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.821905290201534,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0.771048469013278,0.177561725313127,0.246381468041427,0,0.348631135379878,0,0,0.184161977871793,0.229628896329213,0.546273504020151,0.262248829918848,0,0,0,0,0.422206515571503,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0,0,0,0.62962469366128,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,1.58510321173008,0,0,0.487426979262569,0,0.272999822815972,0.141405431953713,0,0,1.32687795048244,0.876901770507525,0,0,0.202910376962704,0.30982349809975,0.845086807596724,0,0,0,0,1.89996871767898,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,1.55519793830904,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.160317640503067,0,0,0.144090417154106,0,0,1.00838358591705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,2.17199840701485,1.72844298240254,5.55198512185996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0.189403005275089,0.251567901752575,0.889811221596536,0,0,0,0.147855149989634,0.159296767163702,0.449803112163605,0,0.829412415681711,0.53168342911599,0,0.150257608997218,0.761610424337591,0,0.181848659202559,0.107410557042488,0,1.19428766609585,0.800055529326307,0,0.336749488765919,0,0,0.428883182749851,0,0,0,0.244736704506468,0,0,0,0,0.192914038270915,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0.224263725161227,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:86200265..86200276,+ | |short_description=p@chr6:86200265..86200276,+ | ||
}} | }} |
Latest revision as of 03:36, 31 July 2015
Short description: | p@chr6:86200265..86200276, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:86200265..86200276, + |
Coexpression cluster: | C1981_leiomyoma_Synoviocyte_Smooth_tenocyte_mesenchymal_Myoblast_meningioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.05e-19 | 3 |
stem cell of epidermis | 1.05e-19 | 3 |
hair follicle cell | 3.16e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.05e-19 | 3 |
papillary layer of dermis | 1.05e-19 | 3 |
hair follicle | 3.16e-12 | 5 |
hair follicle placode | 3.16e-12 | 5 |
dermis | 3.45e-07 | 9 |
dermatome | 3.45e-07 | 9 |
future dermis | 3.45e-07 | 9 |
uterus | 8.60e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.94e-44 | 3 |
leiomyoma | 6.94e-44 | 3 |
benign neoplasm | 4.01e-33 | 4 |
basal cell carcinoma | 1.34e-15 | 1 |
skin carcinoma | 1.86e-08 | 2 |
skin cancer | 1.86e-08 | 2 |
integumentary system cancer | 1.86e-08 | 2 |