FFCP PHASE1:Hg19::chr19:42931534..42931545,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3991 | |EntrezGene=3991 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6621 | |HGNC=6621 | ||
|TSSclassifier=strong | |||
|UniProt=Q05469 | |UniProt=Q05469 | ||
|association_with_transcript=32bp_to_ENST00000244289,NM_005357,uc002otr.2_5end | |association_with_transcript=32bp_to_ENST00000244289,NM_005357,uc002otr.2_5end | ||
|cluster_id=chr19:42931534..42931545,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_2_at_LIPE_5end | |description=CAGE_peak_2_at_LIPE_5end | ||
|id=chr19:42931534..42931545,- | |id=chr19:42931534..42931545,- | ||
|ontology_enrichment_celltype=CL:0002535;2.74e-12;2!CL:0000136;1.04e-07;13 | |ontology_enrichment_celltype=CL:0000136!8.48e-07!15 | ||
| | |ontology_enrichment_celltype_v019=CL:0002535;2.74e-12;2!CL:0000136;1.04e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.90e-12,2;CL:0000136,8.33e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.20e-10;10!UBERON:0005564;6.20e-10;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0006955;2.74e-12;2!UBERON:0004801;2.74e-12;2!UBERON:0000473;3.54e-12;8!UBERON:0003135;4.08e-09;11 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.00e-14!115;UBERON:0000369!1.46e-09!4;UBERON:0002435!1.46e-09!4;UBERON:0000204!1.46e-09!4;UBERON:0010082!1.46e-09!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.74e-12;2!UBERON:0004801;2.74e-12;2!UBERON:0000473;3.54e-12;8!UBERON:0003135;4.08e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.90e-12,2;UBERON:0004801,2.90e-12,2;UBERON:0000473,3.54e-12,8;UBERON:0003135,4.08e-09,11 | |||
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| ||
|short_description=p2@LIPE | |short_description=p2@LIPE | ||
}} | }} |
Latest revision as of 09:38, 18 September 2015
Short description: | p2@LIPE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LIPE_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 32bp_to_ENST00000244289, NM_005357, uc002otr.2_5end |
EntrezGene: | LIPE |
HGNC: | 6621 |
UniProt: | Q05469 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.90e-12 | 2 |
fat cell | 8.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.90e-12 | 2 |
cervix epithelium | 2.90e-12 | 2 |
testis | 3.54e-12 | 8 |
male reproductive organ | 4.08e-09 | 11 |