FFCP PHASE1:Hg19::chr16:86612149..86612161,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2300 | |EntrezGene=2300 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3817 | |HGNC=3817 | ||
|TSSclassifier=strong | |||
|UniProt=Q12952,Q498Y4 | |UniProt=Q12952,Q498Y4 | ||
|association_with_transcript=34bp_to_ENST00000320241,NM_005250,uc002fjr.2_5end | |association_with_transcript=34bp_to_ENST00000320241,NM_005250,uc002fjr.2_5end | ||
|cluster_id=chr16:86612149..86612161,+ | |||
|description=CAGE_peak_2_at_FOXL1_5end | |description=CAGE_peak_2_at_FOXL1_5end | ||
|id=chr16:86612149..86612161,+ | |id=chr16:86612149..86612161,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.16e-11!180;CL:0000183!1.48e-09!59;CL:0000192!2.98e-09!42;CL:0000514!2.98e-09!42;CL:0000057!9.63e-09!75;CL:0000680!3.40e-08!57;CL:0000056!3.40e-08!57;CL:0000355!3.40e-08!57;CL:0000187!4.90e-08!54 | |ontology_enrichment_celltype=CL:0000055!5.16e-11!180;CL:0000183!1.48e-09!59;CL:0000192!2.98e-09!42;CL:0000514!2.98e-09!42;CL:0000057!9.63e-09!75;CL:0000680!3.40e-08!57;CL:0000056!3.40e-08!57;CL:0000355!3.40e-08!57;CL:0000187!4.90e-08!54 | ||
|ontology_enrichment_celltype_v019=CL:0002379;1.96e-09;1!CL:0002599;6.46e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,2.04e-09,1;CL:0002599,6.72e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;1.96e-09;1!DOID:3565;1.96e-09;1!DOID:2513;6.46e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.04e-09,1;DOID:3565,2.04e-09,1;DOID:2513,9.17e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000481!9.16e-15!347;UBERON:0000475!1.04e-13!365;UBERON:0005256!2.73e-13!143;UBERON:0002100!5.55e-12!216;UBERON:0000160!2.83e-10!27;UBERON:0000914!2.94e-10!83;UBERON:0002329!2.94e-10!83;UBERON:0003077!2.94e-10!83;UBERON:0003059!2.94e-10!83;UBERON:0007282!2.94e-10!83;UBERON:0009618!2.94e-10!83;UBERON:0007285!2.94e-10!83;UBERON:0003104!9.14e-10!238;UBERON:0009142!9.14e-10!238;UBERON:0003102!3.29e-08!95;UBERON:0005409!4.65e-08!35;UBERON:0002385!1.16e-07!63;UBERON:0001015!1.16e-07!63;UBERON:0000383!1.16e-07!63;UBERON:0004290!1.48e-07!70;UBERON:0001046!2.76e-07!19;UBERON:0001134!3.14e-07!61;UBERON:0002036!3.14e-07!61;UBERON:0003082!3.14e-07!61;UBERON:0000162!3.91e-07!14;UBERON:0001353!3.91e-07!14;UBERON:0000163!3.91e-07!14;UBERON:0006866!3.91e-07!14;UBERON:0000164!3.91e-07!14;UBERON:0000931!3.91e-07!14;UBERON:0001007!6.68e-07!155;UBERON:0001555!6.68e-07!155;UBERON:0007026!6.68e-07!155 | |ontology_enrichment_uberon=UBERON:0000481!9.16e-15!347;UBERON:0000475!1.04e-13!365;UBERON:0005256!2.73e-13!143;UBERON:0002100!5.55e-12!216;UBERON:0000160!2.83e-10!27;UBERON:0000914!2.94e-10!83;UBERON:0002329!2.94e-10!83;UBERON:0003077!2.94e-10!83;UBERON:0003059!2.94e-10!83;UBERON:0007282!2.94e-10!83;UBERON:0009618!2.94e-10!83;UBERON:0007285!2.94e-10!83;UBERON:0003104!9.14e-10!238;UBERON:0009142!9.14e-10!238;UBERON:0003102!3.29e-08!95;UBERON:0005409!4.65e-08!35;UBERON:0002385!1.16e-07!63;UBERON:0001015!1.16e-07!63;UBERON:0000383!1.16e-07!63;UBERON:0004290!1.48e-07!70;UBERON:0001046!2.76e-07!19;UBERON:0001134!3.14e-07!61;UBERON:0002036!3.14e-07!61;UBERON:0003082!3.14e-07!61;UBERON:0000162!3.91e-07!14;UBERON:0001353!3.91e-07!14;UBERON:0000163!3.91e-07!14;UBERON:0006866!3.91e-07!14;UBERON:0000164!3.91e-07!14;UBERON:0000931!3.91e-07!14;UBERON:0001007!6.68e-07!155;UBERON:0001555!6.68e-07!155;UBERON:0007026!6.68e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;3.57e-07;4!UBERON:0000160;3.89e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.46e-07,4;UBERON:0000160,3.68e-07,17;UBERON:0004119,8.04e-07,160;UBERON:0000925,8.04e-07,160;UBERON:0006595,8.04e-07,160 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0.491467873003018,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0.936480230490962,0,0.298897361103602,0.23486899728753,0,0,0,2.45668634623536,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.505008341862199,1.87677779807946,0,0.438977620880838,0,0.150238058906597,0.226864366320042,0,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.276149695926898,0,0,0.302256294682921,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977424915930974,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.2933531432838,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0.714889968290738,0,0,0.325736184293735,1.06617584622764,0,1.80863626235752,1.74306691720059,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0.821905290201534,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0.260650843404249,0.979005787313703,0,0,0,0,0,1.66435439510497,0,0,0,0,0.128139149255701,0.511707249066704,0.321707842287215,0,0.308419387605311,0.532685175939381,0.164254312027618,3.11552657510173,0.116210378459959,0,0,0,0.574072240823034,2.36718518408732,0.917870904715969,0,0.231046011313244,0,0,0,0,0,0.215915916102139,0,0.812839312631559,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0.650756789328606,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0.532306030317022,0,0.37064843820784,0.858749320451947,0,0.316379424718726,0,1.02359116524534,0,0,0,0.899362287916574,0.54907405947211,0.589062011728432,0.202182481573316,0,0,1.46290121726877,0.243713489631284,0,0.409499734223957,2.40389234321312,0,0,0,2.63070531152258,0,3.9353685122798,0.202910376962704,0,0,0.286822704408103,0.0982490410131212,0.35667105148125,0.354761064070598,0,0,1.13841952129715,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0.552567831062295,0,0,0,1.24415835064723,0.269605053441981,0,0,1.38100767891707,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68069372556344,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661983911750998,1.2557316736289,0,0,0,0,0,0,0.34945333648406,0.343972064943233,0,0,0,0,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,1.78345599658994,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23478475456709,0,0,0,0,0,0,0,0,0,0.151230923763239,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,9.49360979794921,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.739280431085226,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.627944742804112,0,0,0.913158720509496,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46630900405095,4.5897507705831,0,0,0,0.588925401344836,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0.0814032686109745,0,0,11.6772762738563,0,0,0,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0.491467873003018,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0.936480230490962,0,0.298897361103602,0.23486899728753,0,0,0,2.45668634623536,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.505008341862199,1.87677779807946,0,0.438977620880838,0,0.150238058906597,0.226864366320042,0,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.276149695926898,0,0,0.302256294682921,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977424915930974,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.2933531432838,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0.714889968290738,0,0,0.325736184293735,1.06617584622764,0,1.80863626235752,1.74306691720059,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0.821905290201534,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0.260650843404249,0.979005787313703,0,0,0,0,0,1.66435439510497,0,0,0,0,0.128139149255701,0.511707249066704,0.321707842287215,0,0.308419387605311,0.532685175939381,0.164254312027618,3.11552657510173,0.116210378459959,0,0,0,0.574072240823034,2.36718518408732,0.917870904715969,0,0.231046011313244,0,0,0,0,0,0.215915916102139,0,0.812839312631559,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0.650756789328606,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0.532306030317022,0,0.37064843820784,0.858749320451947,0,0.316379424718726,0,1.02359116524534,0,0,0,0.899362287916574,0.54907405947211,0.589062011728432,0.202182481573316,0,0,1.46290121726877,0.243713489631284,0,0.409499734223957,2.40389234321312,0,0,0,2.63070531152258,0,3.9353685122798,0.202910376962704,0,0,0.286822704408103,0.0982490410131212,0.35667105148125,0.354761064070598,0,0,1.13841952129715,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0.552567831062295,0,0,0,1.24415835064723,0.269605053441981,0,0,1.38100767891707,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68069372556344,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661983911750998,1.2557316736289,0,0,0,0,0,0,0.34945333648406,0.343972064943233,0,0,0,0,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,1.78345599658994,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23478475456709,0,0,0,0,0,0,0,0,0,0.151230923763239,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,9.49360979794921,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.739280431085226,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.627944742804112,0,0,0.913158720509496,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46630900405095,4.5897507705831,0,0,0,0.588925401344836,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0.0814032686109745,0,0,11.6772762738563,0,0,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p2@FOXL1 | |short_description=p2@FOXL1 | ||
}} | }} |
Latest revision as of 07:01, 18 September 2015
Short description: | p2@FOXL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 34bp_to_ENST00000320241, NM_005250, uc002fjr.2_5end |
EntrezGene: | FOXL1 |
HGNC: | 3817 |
UniProt: | Q12952Q498Y4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 2.04e-09 | 1 |
smooth muscle cell of the esophagus | 6.72e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
small intestine | 3.46e-07 | 4 |
intestine | 3.68e-07 | 17 |
endoderm-derived structure | 8.04e-07 | 160 |
endoderm | 8.04e-07 | 160 |
presumptive endoderm | 8.04e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.04e-09 | 1 |
meningioma | 2.04e-09 | 1 |
basal cell carcinoma | 9.17e-09 | 1 |