FFCP PHASE1:Hg19::chr2:202298268..202298283,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=66008 | |EntrezGene=66008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13206 | |HGNC=13206 | ||
|TSSclassifier=strong | |||
|UniProt=Q53RS6 | |UniProt=Q53RS6 | ||
|association_with_transcript=0bp_to_ENST00000440597_5end | |association_with_transcript=0bp_to_ENST00000440597_5end | ||
|cluster_id=chr2:202298268..202298283,- | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_5_at_TRAK2_5end | |description=CAGE_peak_5_at_TRAK2_5end | ||
|id=chr2:202298268..202298283,- | |id=chr2:202298268..202298283,- | ||
|ontology_enrichment_celltype=CL:0000764!1.48e-11!2;CL:0000765!1.48e-11!2;CL:0000050!1.48e-11!2;CL:0000038!1.48e-11!2;CL:0000558!1.48e-11!2;CL:0000547!1.48e-11!2;CL:0000549!1.48e-11!2;CL:0000550!1.48e-11!2;CL:0000552!1.48e-11!2 | |ontology_enrichment_celltype=CL:0000764!1.48e-11!2;CL:0000765!1.48e-11!2;CL:0000050!1.48e-11!2;CL:0000038!1.48e-11!2;CL:0000558!1.48e-11!2;CL:0000547!1.48e-11!2;CL:0000549!1.48e-11!2;CL:0000550!1.48e-11!2;CL:0000552!1.48e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.29e-26;2!CL:0000558;1.29e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.29e-26,2;CL:0000765,1.29e-26,2;CL:0000050,1.29e-26,2;CL:0000038,1.29e-26,2;CL:0000558,1.29e-26,2;CL:0000547,1.29e-26,2;CL:0000549,1.29e-26,2;CL:0000550,1.29e-26,2;CL:0000552,1.29e-26,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.95e-13;1!UBERON:0004872;6.52e-08;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!9.26e-21!15;UBERON:0000179!9.26e-21!15;UBERON:0000463!9.26e-21!15;UBERON:0007023!8.79e-14!115;UBERON:0004177!4.06e-11!7;UBERON:0002106!2.74e-07!3;UBERON:0004854!2.74e-07!3;UBERON:0009034!2.74e-07!3;UBERON:0002095!2.74e-07!3;UBERON:0004782!2.74e-07!3;UBERON:0003281!2.74e-07!3;UBERON:0009664!2.74e-07!3;UBERON:0002296!2.74e-07!3;UBERON:0005602!2.74e-07!3;UBERON:0001179!2.74e-07!3;UBERON:0006293!2.74e-07!3 | |ontology_enrichment_uberon=UBERON:0000178!9.26e-21!15;UBERON:0000179!9.26e-21!15;UBERON:0000463!9.26e-21!15;UBERON:0007023!8.79e-14!115;UBERON:0004177!4.06e-11!7;UBERON:0002106!2.74e-07!3;UBERON:0004854!2.74e-07!3;UBERON:0009034!2.74e-07!3;UBERON:0002095!2.74e-07!3;UBERON:0004782!2.74e-07!3;UBERON:0003281!2.74e-07!3;UBERON:0009664!2.74e-07!3;UBERON:0002296!2.74e-07!3;UBERON:0005602!2.74e-07!3;UBERON:0001179!2.74e-07!3;UBERON:0006293!2.74e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.76e-52;15!UBERON:0000179;1.76e-52;15!UBERON:0000463;1.76e-52;15!UBERON:0002390;2.73e-29;32!UBERON:0002193;3.51e-15;42!UBERON:0000341;2.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.76e-52,15;UBERON:0000179,1.76e-52,15;UBERON:0000463,1.76e-52,15;UBERON:0007023,5.60e-12,114;UBERON:0002390,3.15e-09,98;UBERON:0003061,3.15e-09,98;UBERON:0002193,2.77e-08,108;UBERON:0004535,2.91e-08,109;UBERON:0001009,5.18e-08,112;UBERON:0000341,1.99e-07,2 | |||
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|short_description=p5@TRAK2 | |short_description=p5@TRAK2 | ||
}} | }} |
Latest revision as of 13:15, 19 September 2015
Short description: | p5@TRAK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRAK2_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000440597_5end |
EntrezGene: | TRAK2 |
HGNC: | 13206 |
UniProt: | Q53RS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.29e-26 | 2 |
erythroblast | 1.29e-26 | 2 |
megakaryocyte-erythroid progenitor cell | 1.29e-26 | 2 |
erythroid progenitor cell | 1.29e-26 | 2 |
reticulocyte | 1.29e-26 | 2 |
proerythroblast | 1.29e-26 | 2 |
basophilic erythroblast | 1.29e-26 | 2 |
polychromatophilic erythroblast | 1.29e-26 | 2 |
orthochromatic erythroblast | 1.29e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.76e-52 | 15 |
haemolymphatic fluid | 1.76e-52 | 15 |
organism substance | 1.76e-52 | 15 |
adult organism | 5.60e-12 | 114 |
hematopoietic system | 3.15e-09 | 98 |
blood island | 3.15e-09 | 98 |
hemolymphoid system | 2.77e-08 | 108 |
cardiovascular system | 2.91e-08 | 109 |
circulatory system | 5.18e-08 | 112 |
throat | 1.99e-07 | 2 |