FFCP PHASE1:Hg19::chr5:42808318..42808356,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10751 | |HGNC=10751 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=111bp_to_ENST00000509276_5end | |association_with_transcript=111bp_to_ENST00000509276_5end | ||
|cluster_id=chr5:42808318..42808356,- | |||
|coexpression_cluster_id=C951 | |coexpression_cluster_id=C951 | ||
|description=CAGE_peak_6_at_SEPP1_5end | |description=CAGE_peak_6_at_SEPP1_5end | ||
|id=chr5:42808318..42808356,- | |id=chr5:42808318..42808356,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002619;6.10e-13;3!CL:0000182;4.74e-11;12!CL:0000235;8.32e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,5.66e-13,3;CL:0000182,3.93e-11,12;CL:0000235,8.88e-11,6 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.56e-08;11!UBERON:0003104;3.28e-08;31!UBERON:0009497;5.45e-07;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.86e-50!115;UBERON:0001049!2.97e-17!57;UBERON:0005068!2.97e-17!57;UBERON:0006241!2.97e-17!57;UBERON:0007135!2.97e-17!57;UBERON:0002616!9.26e-15!59;UBERON:0001017!2.38e-14!82;UBERON:0002346!5.35e-14!90;UBERON:0005743!6.40e-14!86;UBERON:0003075!1.52e-13!86;UBERON:0007284!1.52e-13!86;UBERON:0003080!2.82e-12!42;UBERON:0000955!1.40e-11!69;UBERON:0006238!1.40e-11!69;UBERON:0002780!1.44e-11!41;UBERON:0001890!1.44e-11!41;UBERON:0006240!1.44e-11!41;UBERON:0000073!2.20e-11!94;UBERON:0001016!2.20e-11!94;UBERON:0000468!1.19e-09!659;UBERON:0000062!1.58e-09!511;UBERON:0002298!2.46e-09!8;UBERON:0002020!3.14e-09!34;UBERON:0003528!3.14e-09!34;UBERON:0001893!6.55e-09!34;UBERON:0003056!9.48e-09!61;UBERON:0002791!1.99e-08!33;UBERON:0000153!2.72e-08!129;UBERON:0007811!2.72e-08!129;UBERON:0000922!3.50e-08!612;UBERON:0000477!6.06e-08!286;UBERON:0001869!1.52e-07!32;UBERON:0002308!1.67e-07!9;UBERON:0000125!1.67e-07!9;UBERON:0000481!2.95e-07!347;UBERON:0000033!3.20e-07!123;UBERON:0000467!3.22e-07!625;UBERON:0002050!3.25e-07!605;UBERON:0005423!3.25e-07!605;UBERON:0000480!3.82e-07!626;UBERON:0000923!6.97e-07!604;UBERON:0005291!6.97e-07!604;UBERON:0006598!6.97e-07!604;UBERON:0002532!6.97e-07!604;UBERON:0000064!7.96e-07!219;UBERON:0000924!9.41e-07!173;UBERON:0006601!9.41e-07!173 | |ontology_enrichment_uberon=UBERON:0007023!2.86e-50!115;UBERON:0001049!2.97e-17!57;UBERON:0005068!2.97e-17!57;UBERON:0006241!2.97e-17!57;UBERON:0007135!2.97e-17!57;UBERON:0002616!9.26e-15!59;UBERON:0001017!2.38e-14!82;UBERON:0002346!5.35e-14!90;UBERON:0005743!6.40e-14!86;UBERON:0003075!1.52e-13!86;UBERON:0007284!1.52e-13!86;UBERON:0003080!2.82e-12!42;UBERON:0000955!1.40e-11!69;UBERON:0006238!1.40e-11!69;UBERON:0002780!1.44e-11!41;UBERON:0001890!1.44e-11!41;UBERON:0006240!1.44e-11!41;UBERON:0000073!2.20e-11!94;UBERON:0001016!2.20e-11!94;UBERON:0000468!1.19e-09!659;UBERON:0000062!1.58e-09!511;UBERON:0002298!2.46e-09!8;UBERON:0002020!3.14e-09!34;UBERON:0003528!3.14e-09!34;UBERON:0001893!6.55e-09!34;UBERON:0003056!9.48e-09!61;UBERON:0002791!1.99e-08!33;UBERON:0000153!2.72e-08!129;UBERON:0007811!2.72e-08!129;UBERON:0000922!3.50e-08!612;UBERON:0000477!6.06e-08!286;UBERON:0001869!1.52e-07!32;UBERON:0002308!1.67e-07!9;UBERON:0000125!1.67e-07!9;UBERON:0000481!2.95e-07!347;UBERON:0000033!3.20e-07!123;UBERON:0000467!3.22e-07!625;UBERON:0002050!3.25e-07!605;UBERON:0005423!3.25e-07!605;UBERON:0000480!3.82e-07!626;UBERON:0000923!6.97e-07!604;UBERON:0005291!6.97e-07!604;UBERON:0006598!6.97e-07!604;UBERON:0002532!6.97e-07!604;UBERON:0000064!7.96e-07!219;UBERON:0000924!9.41e-07!173;UBERON:0006601!9.41e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.45e-12;19!UBERON:0006925;9.45e-12;19!UBERON:0002423;1.31e-08;25!UBERON:0001897;2.07e-08;2!UBERON:0001875;2.07e-08;2!UBERON:0006514;2.07e-08;2!UBERON:0010225;2.07e-08;2!UBERON:0002108;1.13e-07;4!UBERON:0000125;9.33e-07;9!UBERON:0002308;9.33e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.25e-18,114;UBERON:0009854,6.98e-12,23;UBERON:0002107,8.28e-12,19;UBERON:0006925,8.28e-12,19;UBERON:0008836,8.28e-12,19;UBERON:0009856,2.55e-10,26;UBERON:0008835,5.18e-10,22;UBERON:0003894,5.18e-10,22;UBERON:0011216,2.20e-09,223;UBERON:0007499,1.19e-08,25;UBERON:0009497,1.19e-08,25;UBERON:0000015,1.19e-08,25;UBERON:0002423,1.19e-08,25;UBERON:0006235,1.19e-08,25;UBERON:0004161,1.19e-08,25;UBERON:0001897,2.16e-08,2;UBERON:0010225,2.16e-08,2;UBERON:0001875,2.24e-08,2;UBERON:0006514,2.24e-08,2;UBERON:0004921,5.71e-08,118;UBERON:0002108,1.25e-07,4;UBERON:0001049,6.22e-07,56;UBERON:0005068,6.22e-07,56;UBERON:0006241,6.22e-07,56;UBERON:0007135,6.22e-07,56;UBERON:0000125,9.35e-07,9;UBERON:0002308,9.35e-07,9 | |||
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| ||
|short_description=p6@SEPP1 | |short_description=p6@SEPP1 | ||
}} | }} |
Latest revision as of 23:18, 17 September 2015
Short description: | p6@SEPP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SEPP1_5end |
Coexpression cluster: | C951_CD14_Hepatocyte_liver_small_Monocytederived_substantia_spinal |
Association with transcript: | 111bp_to_ENST00000509276_5end |
EntrezGene: | NA |
HGNC: | 10751 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 5.66e-13 | 3 |
hepatocyte | 3.93e-11 | 12 |
macrophage | 8.88e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.25e-18 | 114 |
digestive tract diverticulum | 6.98e-12 | 23 |
liver | 8.28e-12 | 19 |
digestive gland | 8.28e-12 | 19 |
liver bud | 8.28e-12 | 19 |
sac | 2.55e-10 | 26 |
hepatic diverticulum | 5.18e-10 | 22 |
liver primordium | 5.18e-10 | 22 |
organ system subdivision | 2.20e-09 | 223 |
epithelial sac | 1.19e-08 | 25 |
epithelium of foregut-midgut junction | 1.19e-08 | 25 |
anatomical boundary | 1.19e-08 | 25 |
hepatobiliary system | 1.19e-08 | 25 |
foregut-midgut junction | 1.19e-08 | 25 |
septum transversum | 1.19e-08 | 25 |
dorsal plus ventral thalamus | 2.16e-08 | 2 |
thalamic complex | 2.16e-08 | 2 |
globus pallidus | 2.24e-08 | 2 |
pallidum | 2.24e-08 | 2 |
subdivision of digestive tract | 5.71e-08 | 118 |
small intestine | 1.25e-07 | 4 |
neural tube | 6.22e-07 | 56 |
neural rod | 6.22e-07 | 56 |
future spinal cord | 6.22e-07 | 56 |
neural keel | 6.22e-07 | 56 |
neural nucleus | 9.35e-07 | 9 |
nucleus of brain | 9.35e-07 | 9 |