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FFCP PHASE1:Hg19::chr11:123396307..123396358,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=57476
|EntrezGene=57476
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=29214
|HGNC=29214
|TSSclassifier=strong
|UniProt=E7EPH8,F5H572
|UniProt=E7EPH8,F5H572
|association_with_transcript=0bp_to_ENST00000456860,ENST00000539133_5end
|association_with_transcript=0bp_to_ENST00000456860,ENST00000539133_5end
|cluster_id=chr11:123396307..123396358,+
|coexpression_cluster_id=C3
|coexpression_cluster_id=C3
|description=CAGE_peak_2_at_GRAMD1B_5end
|description=CAGE_peak_2_at_GRAMD1B_5end
|id=chr11:123396307..123396358,+
|id=chr11:123396307..123396358,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0006601;1.41e-20;82!UBERON:0006215;1.69e-09;3!UBERON:0006241;7.71e-08;3!UBERON:0003057;7.71e-08;3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019=UBERON:0002780;3.21e-56;41!UBERON:0001890;3.21e-56;41!UBERON:0001893;1.85e-54;34!UBERON:0000073;3.75e-54;53!UBERON:0002616;3.75e-54;53!UBERON:0003528;5.06e-52;34!UBERON:0002020;5.06e-52;34!UBERON:0001869;1.05e-51;32!UBERON:0002791;2.48e-51;32!UBERON:0002619;3.78e-48;22!UBERON:0001950;2.02e-43;20!UBERON:0000956;7.34e-42;25!UBERON:0000203;7.34e-42;25!UBERON:0000955;1.60e-36;68!UBERON:0001017;3.08e-35;75!UBERON:0001016;9.45e-30;83!UBERON:0002420;5.73e-22;9!UBERON:0007245;5.73e-22;9!UBERON:0010009;5.73e-22;9!UBERON:0010011;5.73e-22;9!UBERON:0000454;5.73e-22;9!UBERON:0000125;1.16e-21;9!UBERON:0002308;1.16e-21;9!UBERON:0007023;2.49e-19;114!UBERON:0001894;4.86e-18;7!UBERON:0009663;2.57e-17;7!UBERON:0000200;6.38e-17;6!UBERON:0004733;1.18e-16;12!UBERON:0002028;1.18e-16;12!UBERON:0004732;3.16e-15;13!UBERON:0002298;4.36e-15;6!UBERON:0001872;6.39e-14;5!UBERON:0000349;2.28e-13;5!UBERON:0001871;2.52e-13;6!UBERON:0003296;2.36e-11;4!UBERON:0010133;2.36e-11;4!UBERON:0002784;3.19e-11;4!UBERON:0011216;4.97e-11;132!UBERON:0000369;7.53e-11;4!UBERON:0002435;7.53e-11;4!UBERON:0000204;7.53e-11;4!UBERON:0002680;1.51e-10;9!UBERON:0001895;1.51e-10;9!UBERON:0002021;1.56e-09;5!UBERON:0001870;1.69e-09;3!UBERON:0010314;2.06e-09;132!UBERON:0005383;1.74e-08;3!UBERON:0005382;1.74e-08;3!UBERON:0006947;1.86e-08;3!UBERON:0004054;1.86e-08;3!UBERON:0000988;1.88e-08;3!UBERON:0001896;2.56e-08;3!UBERON:0005290;2.56e-08;3!UBERON:0002240;7.71e-08;3!UBERON:0005174;7.71e-08;3!UBERON:0001137;7.71e-08;3!UBERON:0002702;6.39e-07;2
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|short_description=p2@GRAMD1B
|short_description=p2@GRAMD1B
}}
}}

Latest revision as of 09:45, 16 September 2015

Short description:p2@GRAMD1B
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_GRAMD1B_5end
Coexpression cluster:C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala
Association with transcript: 0bp_to_ENST00000456860, ENST00000539133_5end
EntrezGene:GRAMD1B
HGNC: 29214
UniProt: E7EPH8F5H572
Genome view:ZENBU


View on UCSC genome browser

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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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