FFCP PHASE1:Hg19::chr2:26972981..26973006,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:26972981..26973006,+ | |||
|description=CAGE_peak_at_chr2:26972981..26973006,+ | |description=CAGE_peak_at_chr2:26972981..26973006,+ | ||
|id=chr2:26972981..26973006,+ | |id=chr2:26972981..26973006,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.59e-11!254;CL:0000221!3.23e-11!71;CL:0002321!2.24e-07!248;CL:0000223!3.10e-07!59;CL:0000133!3.18e-07!59;CL:0000220!7.87e-07!246;CL:0002319!8.20e-07!25 | |ontology_enrichment_celltype=CL:0000066!1.59e-11!254;CL:0000221!3.23e-11!71;CL:0002321!2.24e-07!248;CL:0000223!3.10e-07!59;CL:0000133!3.18e-07!59;CL:0000220!7.87e-07!246;CL:0002319!8.20e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.32e-12;7!CL:0000586;1.32e-12;7!CL:0002367;4.48e-12;2!CL:1000487;1.18e-11;2!CL:0002336;7.54e-07;1!CL:0002261;7.54e-07;1!CL:0002550;7.54e-07;1!CL:0002170;7.54e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.31e-12,7;CL:0000586,1.31e-12,7;CL:0002367,4.16e-12,2;CL:1000487,6.76e-12,2;CL:0002336,6.96e-07,1;CL:0002261,6.96e-07,1;CL:0002170,6.96e-07,1;CL:0002550,7.77e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.64e-09;10!UBERON:0005564;7.64e-09;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;4.00e-08;22!DOID:2994;4.00e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.10e-08,22;DOID:2994,3.10e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0001444!3.54e-12!48;UBERON:0004119!6.45e-12!169;UBERON:0000925!6.45e-12!169;UBERON:0006595!6.45e-12!169;UBERON:0000970!2.20e-11!20;UBERON:0002104!1.38e-10!21;UBERON:0000020!2.01e-10!23;UBERON:0000019!2.02e-10!19;UBERON:0000047!2.02e-10!19;UBERON:0004088!2.02e-10!19;UBERON:0003072!2.02e-10!19;UBERON:0003071!2.02e-10!19;UBERON:0004128!2.02e-10!19;UBERON:0001456!3.09e-10!21;UBERON:0001007!3.72e-10!155;UBERON:0001555!3.72e-10!155;UBERON:0007026!3.72e-10!155;UBERON:0005911!5.37e-10!82;UBERON:0001032!9.28e-10!24;UBERON:0004456!9.28e-10!24;UBERON:0001801!2.23e-08!14;UBERON:0004921!5.96e-08!129;UBERON:0004185!5.96e-08!129;UBERON:0005085!3.46e-07!29;UBERON:0002367!4.07e-07!11;UBERON:0010147!4.07e-07!11;UBERON:0009846!4.07e-07!11;UBERON:0003353!4.07e-07!11;UBERON:0004902!4.07e-07!11;UBERON:0003820!4.07e-07!11;UBERON:0009847!4.07e-07!11;UBERON:0003102!4.54e-07!95;UBERON:0005153!4.78e-07!37;UBERON:0000161!7.26e-07!35;UBERON:0000475!7.77e-07!365 | |ontology_enrichment_uberon=UBERON:0001444!3.54e-12!48;UBERON:0004119!6.45e-12!169;UBERON:0000925!6.45e-12!169;UBERON:0006595!6.45e-12!169;UBERON:0000970!2.20e-11!20;UBERON:0002104!1.38e-10!21;UBERON:0000020!2.01e-10!23;UBERON:0000019!2.02e-10!19;UBERON:0000047!2.02e-10!19;UBERON:0004088!2.02e-10!19;UBERON:0003072!2.02e-10!19;UBERON:0003071!2.02e-10!19;UBERON:0004128!2.02e-10!19;UBERON:0001456!3.09e-10!21;UBERON:0001007!3.72e-10!155;UBERON:0001555!3.72e-10!155;UBERON:0007026!3.72e-10!155;UBERON:0005911!5.37e-10!82;UBERON:0001032!9.28e-10!24;UBERON:0004456!9.28e-10!24;UBERON:0001801!2.23e-08!14;UBERON:0004921!5.96e-08!129;UBERON:0004185!5.96e-08!129;UBERON:0005085!3.46e-07!29;UBERON:0002367!4.07e-07!11;UBERON:0010147!4.07e-07!11;UBERON:0009846!4.07e-07!11;UBERON:0003353!4.07e-07!11;UBERON:0004902!4.07e-07!11;UBERON:0003820!4.07e-07!11;UBERON:0009847!4.07e-07!11;UBERON:0003102!4.54e-07!95;UBERON:0005153!4.78e-07!37;UBERON:0000161!7.26e-07!35;UBERON:0000475!7.77e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0005969;4.48e-12;2!UBERON:0003956;4.48e-12;2!UBERON:0001905;1.62e-11;2!UBERON:0002757;1.62e-11;2!UBERON:0010134;1.62e-11;2!UBERON:0005408;1.62e-11;2!UBERON:0001899;1.62e-11;2!UBERON:0000473;4.86e-11;8!UBERON:0003101;3.01e-08;22!UBERON:0000079;3.01e-08;22!UBERON:0003135;4.83e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,4.16e-12,2;UBERON:0003956,4.16e-12,2;UBERON:0001905,3.46e-11,2;UBERON:0002757,3.46e-11,2;UBERON:0010134,3.46e-11,2;UBERON:0005408,3.46e-11,2;UBERON:0001899,3.46e-11,2;UBERON:0000473,4.83e-11,8;UBERON:0003101,2.61e-08,22;UBERON:0000079,2.61e-08,22;UBERON:0003135,4.80e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0,1.35433163884467,0.204000691244253,0.626909442956176,0.85870796139317,0.684372125364421,0.125542639594803,0,0,0,0,0,0,1.83884244895785,0.30120591877825,0.739508020333575,1.62681121218633,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.221729397462564,0.263504357079378,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,3.04617861383936,0.312160076830321,0,0,0,0,0,0,0.491337269247072,0.103325781175765,0,0,0,1.43723628363248,0.841680569770331,0.375355559615893,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0.0920498986422993,0.80823028409406,0,0,0,0.773043412653187,0.545492241181669,0.573609190778008,0.487894824518382,0.397589304964456,0.348581828608555,0.725627385107593,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0.435758888184812,0.237270619111097,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0,0.343135620597051,0.98775256867763,2.24803506515239,0.201057944823262,3.98130314181677,0.651616610620649,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,1.17587489739202,0.708875486211932,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0.434418072340414,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0.164254312027618,0,0,0.362578348774867,0.802025881213139,0.276242966807689,0.918515585316854,0.910455840033585,0.655622074797121,0.451199612907412,0.539107359730903,0,0,0.105551628892876,0,0,0,0,0.812839312631559,0,0.254876273045038,0,0.447749509444357,0,0,0,0.656029291399411,0.650756789328606,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.768760269460425,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,1.2591072030832,0.274537029736055,0.353437207037059,0,0,0,0,0,0,1.77449884830381,4.52497382251881,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,2.27683904259429,7.69856384538962,1.63577591633371,0,0,0,1.29151611801369,0,0.443430153536676,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671028323677248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0.306806047506464,0.246169610922139,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0.975966209950223,0,0,0,0,0,0,0.732780747214898,0,0,0,0,0.225595660617181,0,0,0,0,1.05499032264014,0.816164040795739,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.364909578431332,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0.174118413160805,0,0,0,0.365446585430928,0.0821154570532092,0,0,1.35588444468319,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0.509991088181609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.236349546921671,0.0824158583811665,0,0.492137407573744,0.0846733320657845,0,0,0.643012593860077,0.825236619583403,1.24632101408756,0,0,0,0.335434687599266,0,0.209818352539992,0,0,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0,0,0.453248366080503,0,0,0,0,1.19760786519031,0,0.106787412567695,0.157204305099666,0.414239055347196,0,1.18566979138767,0.243585196761792,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.968440444553616,0,0.454947352624943,0,0.235265819698172,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0,1.04349012362347,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,1.94358060540469,0,0,1.02496607435179,0,0.911579868532147,0,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0.559518030877778,0.622077260032973,1.53473245564382,0,0.314531883711793,0.109209638192014,0,0,0,0,0,0,0,0.352675943690684,7.34989145647681,0,0,0,0,0,0,0,0,0,0,0.550285795565037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14280734351315,1.00885116665647,0,0.227662191351298,0.0887023701626388,0.115233987555779,0,0,0,0.354581522651905,0,0,0,0,0,0.431855182437243,0,0.142953088353313,0.790068058663633,0,0,0,0,0,0,0.430227358820278,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0.233939463462106,0,0,0,0.549702583727146,0.452888530700021,0.308696632431779,0.437119121007915,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0.462175628631418,0,0.252332849670158,0.437062287854782,0.633492505057185,1.42784361638774,5.87878291584233,3.21632148371957,3.0084904715085,0,0,0,0,0.852935927603924,0,0,0,0.112131862580613,0,0,0,0.342233301085281,0.875576689189638,0.0717222053926763,0,0.0814032686109745,0,1.9307228228694,1.52702843581198,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0,1.35433163884467,0.204000691244253,0.626909442956176,0.85870796139317,0.684372125364421,0.125542639594803,0,0,0,0,0,0,1.83884244895785,0.30120591877825,0.739508020333575,1.62681121218633,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.221729397462564,0.263504357079378,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,3.04617861383936,0.312160076830321,0,0,0,0,0,0,0.491337269247072,0.103325781175765,0,0,0,1.43723628363248,0.841680569770331,0.375355559615893,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0.0920498986422993,0.80823028409406,0,0,0,0.773043412653187,0.545492241181669,0.573609190778008,0.487894824518382,0.397589304964456,0.348581828608555,0.725627385107593,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0.435758888184812,0.237270619111097,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0,0.343135620597051,0.98775256867763,2.24803506515239,0.201057944823262,3.98130314181677,0.651616610620649,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,1.17587489739202,0.708875486211932,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0.434418072340414,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0.164254312027618,0,0,0.362578348774867,0.802025881213139,0.276242966807689,0.918515585316854,0.910455840033585,0.655622074797121,0.451199612907412,0.539107359730903,0,0,0.105551628892876,0,0,0,0,0.812839312631559,0,0.254876273045038,0,0.447749509444357,0,0,0,0.656029291399411,0.650756789328606,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.768760269460425,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,1.2591072030832,0.274537029736055,0.353437207037059,0,0,0,0,0,0,1.77449884830381,4.52497382251881,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,2.27683904259429,7.69856384538962,1.63577591633371,0,0,0,1.29151611801369,0,0.443430153536676,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671028323677248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0.306806047506464,0.246169610922139,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0.975966209950223,0,0,0,0,0,0,0.732780747214898,0,0,0,0,0.225595660617181,0,0,0,0,1.05499032264014,0.816164040795739,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.364909578431332,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0.174118413160805,0,0,0,0.365446585430928,0.0821154570532092,0,0,1.35588444468319,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0.509991088181609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.236349546921671,0.0824158583811665,0,0.492137407573744,0.0846733320657845,0,0,0.643012593860077,0.825236619583403,1.24632101408756,0,0,0,0.335434687599266,0,0.209818352539992,0,0,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0,0,0.453248366080503,0,0,0,0,1.19760786519031,0,0.106787412567695,0.157204305099666,0.414239055347196,0,1.18566979138767,0.243585196761792,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.968440444553616,0,0.454947352624943,0,0.235265819698172,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0,1.04349012362347,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,1.94358060540469,0,0,1.02496607435179,0,0.911579868532147,0,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0.559518030877778,0.622077260032973,1.53473245564382,0,0.314531883711793,0.109209638192014,0,0,0,0,0,0,0,0.352675943690684,7.34989145647681,0,0,0,0,0,0,0,0,0,0,0.550285795565037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14280734351315,1.00885116665647,0,0.227662191351298,0.0887023701626388,0.115233987555779,0,0,0,0.354581522651905,0,0,0,0,0,0.431855182437243,0,0.142953088353313,0.790068058663633,0,0,0,0,0,0,0.430227358820278,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0.233939463462106,0,0,0,0.549702583727146,0.452888530700021,0.308696632431779,0.437119121007915,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0.462175628631418,0,0.252332849670158,0.437062287854782,0.633492505057185,1.42784361638774,5.87878291584233,3.21632148371957,3.0084904715085,0,0,0,0,0.852935927603924,0,0,0,0.112131862580613,0,0,0,0.342233301085281,0.875576689189638,0.0717222053926763,0,0.0814032686109745,0,1.9307228228694,1.52702843581198,0,0,0,0,0,0 | ||
|short_description=p@chr2:26972981..26973006,+ | |short_description=p@chr2:26972981..26973006,+ | ||
}} | }} |
Latest revision as of 09:03, 29 July 2015
Short description: | p@chr2:26972981..26973006, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:26972981..26973006, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.31e-12 | 7 |
germ cell | 1.31e-12 | 7 |
trabecular meshwork cell | 4.16e-12 | 2 |
smooth muscle cell of prostate | 6.76e-12 | 2 |
buccal mucosa cell | 6.96e-07 | 1 |
endothelial cell of viscerocranial mucosa | 6.96e-07 | 1 |
keratinized cell of the oral mucosa | 6.96e-07 | 1 |
fibroblast of the conjuctiva | 7.77e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 4.16e-12 | 2 |
aqueous drainage system | 4.16e-12 | 2 |
pineal body | 3.46e-11 | 2 |
regional part of epithalamus | 3.46e-11 | 2 |
secretory circumventricular organ | 3.46e-11 | 2 |
circumventricular organ | 3.46e-11 | 2 |
epithalamus | 3.46e-11 | 2 |
testis | 4.83e-11 | 8 |
male organism | 2.61e-08 | 22 |
male reproductive system | 2.61e-08 | 22 |
male reproductive organ | 4.80e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.10e-08 | 22 |
germ cell cancer | 3.10e-08 | 22 |