FFCP PHASE1:Hg19::chr1:201288895..201288902,+: Difference between revisions
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|id=chr1:201288895..201288902,+
|short_description=p@chr1:201288895..201288902,+
|description=CAGE_peak_at_chr1:201288895..201288902,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:201288895..201288902,+ | |||
|coexpression_cluster_id=C3916 | |||
|description=CAGE_peak_at_chr1:201288895..201288902,+ | |||
|id=chr1:201288895..201288902,+ | |||
|ontology_enrichment_celltype=CL:0000362!1.71e-39!8;CL:0000317!4.63e-26!2;CL:1000448!4.63e-26!2;CL:0002308!4.63e-26!2;CL:0002140!4.63e-26!2;CL:0002159!2.39e-24!13;CL:0000312!1.30e-23!5;CL:0000240!8.56e-20!6;CL:0000311!8.56e-20!6;CL:0000079!8.56e-20!6;CL:0000237!8.56e-20!6;CL:0000036!8.56e-20!6;CL:0000357!8.56e-20!6;CL:0000114!8.56e-20!6;CL:0000515!3.21e-13!4;CL:0000622!5.03e-11!5;CL:0000035!2.08e-10!20;CL:0002077!1.41e-09!33;CL:0000154!2.45e-09!6;CL:0002149!3.14e-09!6;CL:0002255!3.14e-09!6;CL:0000221!6.25e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000312;3.49e-79;5!CL:0000240;2.83e-66;6!CL:0000311;2.83e-66;6!CL:0000079;2.83e-66;6!CL:0000237;2.83e-66;6!CL:0000362;9.75e-45;9!CL:0002159;2.55e-29;14!CL:0002077;1.84e-13;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,3.49e-79,5;CL:0000240,2.83e-66,6;CL:0000311,2.83e-66,6;CL:0000079,2.83e-66,6;CL:0000237,2.83e-66,6;CL:0000036,2.83e-66,6;CL:0000357,2.83e-66,6;CL:0000114,2.83e-66,6;CL:0000362,9.75e-45,9;CL:0002159,2.55e-29,14;CL:0002077,6.62e-13,34;CL:0000076,1.52e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000357;2.83e-66;6!CL:0000114;2.83e-66;6 | |||
|ontology_enrichment_disease=DOID:3001!3.14e-09!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002419!4.63e-26!2;UBERON:0007771!4.63e-26!2;UBERON:0003297!4.63e-26!2;UBERON:0001821!4.63e-26!2;UBERON:0003487!4.63e-26!2;UBERON:0001820!4.63e-26!2;UBERON:0005089!4.63e-26!2;UBERON:0005088!4.63e-26!2;UBERON:0001003!1.29e-22!14;UBERON:0007376!1.29e-22!14;UBERON:0007383!1.29e-22!14;UBERON:0002581!1.83e-13!1;UBERON:0002097!6.97e-08!40;UBERON:0002199!5.41e-07!45;UBERON:0002416!5.41e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.82e-27;15!UBERON:0007376;1.82e-27;15!UBERON:0010371;1.84e-13;31!UBERON:0002199;4.27e-13;46!UBERON:0002416;4.27e-13;46!UBERON:0002097;1.59e-09;41!UBERON:0003102;1.47e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.82e-27,15;UBERON:0007376,1.82e-27,15;UBERON:0007383,1.82e-27,15;UBERON:0002097,6.32e-11,41;UBERON:0002199,7.07e-10,46;UBERON:0002416,7.07e-10,46 | |||
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|short_description=p@chr1:201288895..201288902,+ | |||
}} | }} |
Latest revision as of 02:06, 28 July 2015
Short description: | p@chr1:201288895..201288902, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:201288895..201288902, + |
Coexpression cluster: | C3916_Keratinocyte_Bronchial_Tracheal_Corneal_Adipocyte_glioblastoma_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 3.49e-79 | 5 |
stratified squamous epithelial cell | 2.83e-66 | 6 |
keratin accumulating cell | 2.83e-66 | 6 |
stratified epithelial cell | 2.83e-66 | 6 |
keratinizing barrier epithelial cell | 2.83e-66 | 6 |
epithelial fate stem cell | 2.83e-66 | 6 |
stratified epithelial stem cell | 2.83e-66 | 6 |
surface ectodermal cell | 2.83e-66 | 6 |
epidermal cell | 9.75e-45 | 9 |
general ecto-epithelial cell | 2.55e-29 | 14 |
ecto-epithelial cell | 6.62e-13 | 34 |
squamous epithelial cell | 1.52e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.82e-27 | 15 |
outer epithelium | 1.82e-27 | 15 |
enveloping layer of ectoderm | 1.82e-27 | 15 |
skin of body | 6.32e-11 | 41 |
integument | 7.07e-10 | 46 |
integumental system | 7.07e-10 | 46 |