FFCP PHASE1:Hg19::chr1:206331238..206331251,+: Difference between revisions
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|id=chr1:206331238..206331251,+
|short_description=p@chr1:206331238..206331251,+
|description=CAGE_peak_at_chr1:206331238..206331251,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:206331238..206331251,+ | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_at_chr1:206331238..206331251,+ | |||
|id=chr1:206331238..206331251,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.06e-11!5;CL:0000764!3.70e-08!2;CL:0000765!3.70e-08!2;CL:0000050!3.70e-08!2;CL:0000038!3.70e-08!2;CL:0000558!3.70e-08!2;CL:0000547!3.70e-08!2;CL:0000549!3.70e-08!2;CL:0000550!3.70e-08!2;CL:0000552!3.70e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:1000415;2.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,2.25e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;4.83e-14;1!UBERON:0004161;1.06e-10;11!UBERON:0009497;3.87e-09;13!UBERON:0001041;8.01e-07;30 | |||
|ontology_enrichment_disease=DOID:3493!1.67e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.16e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.12e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000945!8.14e-11!8;UBERON:0010039!8.14e-11!8;UBERON:0005409!7.73e-10!35;UBERON:0001007!3.68e-08!155;UBERON:0001555!3.68e-08!155;UBERON:0007026!3.68e-08!155;UBERON:0004119!8.13e-08!169;UBERON:0000925!8.13e-08!169;UBERON:0006595!8.13e-08!169;UBERON:0004921!5.43e-07!129;UBERON:0004185!5.43e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;3.34e-23;4!UBERON:0002110;1.58e-17;3!UBERON:0002171;8.57e-14;1!UBERON:0006518;8.57e-14;1!UBERON:0008949;8.57e-14;1!UBERON:0000101;8.57e-14;1!UBERON:0002167;8.57e-14;1!UBERON:0005409;1.11e-13;22!UBERON:0000160;1.94e-11;17!UBERON:0002423;3.95e-08;25!UBERON:0004921;4.19e-08;33!UBERON:0002294;4.83e-08;7!UBERON:0001173;4.83e-08;7!UBERON:0000922;9.23e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.75e-23,4;UBERON:0002110,1.79e-17,3;UBERON:0006242,1.79e-17,3;UBERON:0002171,8.58e-14,1;UBERON:0006518,8.58e-14,1;UBERON:0008949,8.58e-14,1;UBERON:0000101,8.58e-14,1;UBERON:0002167,8.58e-14,1;UBERON:0005409,4.39e-12,25;UBERON:0000160,2.02e-11,17;UBERON:0001007,6.07e-09,145;UBERON:0001555,6.07e-09,145;UBERON:0007026,6.07e-09,145;UBERON:0009497,4.14e-08,25;UBERON:0000015,4.14e-08,25;UBERON:0002423,4.14e-08,25;UBERON:0006235,4.14e-08,25;UBERON:0004161,4.14e-08,25;UBERON:0004119,5.65e-08,160;UBERON:0000925,5.65e-08,160;UBERON:0006595,5.65e-08,160;UBERON:0004921,1.86e-07,118 | |||
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| ||
|short_description=p@chr1:206331238..206331251,+ | |||
}} | }} |
Latest revision as of 02:53, 28 July 2015
Short description: | p@chr1:206331238..206331251, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:206331238..206331251, + |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 3.75e-23 | 4 |
gallbladder | 1.79e-17 | 3 |
gall bladder primordium | 1.79e-17 | 3 |
lower lobe of right lung | 8.58e-14 | 1 |
right lung lobe | 8.58e-14 | 1 |
lower lobe of lung | 8.58e-14 | 1 |
lobe of lung | 8.58e-14 | 1 |
right lung | 8.58e-14 | 1 |
gastrointestinal system | 4.39e-12 | 25 |
intestine | 2.02e-11 | 17 |
digestive system | 6.07e-09 | 145 |
digestive tract | 6.07e-09 | 145 |
primitive gut | 6.07e-09 | 145 |
epithelium of foregut-midgut junction | 4.14e-08 | 25 |
anatomical boundary | 4.14e-08 | 25 |
hepatobiliary system | 4.14e-08 | 25 |
foregut-midgut junction | 4.14e-08 | 25 |
septum transversum | 4.14e-08 | 25 |
endoderm-derived structure | 5.65e-08 | 160 |
endoderm | 5.65e-08 | 160 |
presumptive endoderm | 5.65e-08 | 160 |
subdivision of digestive tract | 1.86e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.12e-07 | 2 |