FFCP PHASE1:Hg19::chr1:226613592..226613598,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:226613592..226613598,- | |||
|coexpression_cluster_id=C2572 | |coexpression_cluster_id=C2572 | ||
|description=CAGE_peak_at_chr1:226613592..226613598,- | |description=CAGE_peak_at_chr1:226613592..226613598,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000542!4.13e-16!53;CL:0000051!4.13e-16!53;CL:0002032!2.09e-15!165;CL:0000837!2.09e-15!165;CL:0000037!2.65e-15!172;CL:0000566!2.65e-15!172;CL:0000838!8.37e-15!52;CL:0000988!7.18e-14!182;CL:0000084!9.33e-13!25;CL:0000827!9.33e-13!25;CL:0000625!6.43e-08!11;CL:0002150!1.03e-07!3;CL:0000861!1.03e-07!3;CL:0002087!8.40e-07!119 | |ontology_enrichment_celltype=CL:0000542!4.13e-16!53;CL:0000051!4.13e-16!53;CL:0002032!2.09e-15!165;CL:0000837!2.09e-15!165;CL:0000037!2.65e-15!172;CL:0000566!2.65e-15!172;CL:0000838!8.37e-15!52;CL:0000988!7.18e-14!182;CL:0000084!9.33e-13!25;CL:0000827!9.33e-13!25;CL:0000625!6.43e-08!11;CL:0002150!1.03e-07!3;CL:0000861!1.03e-07!3;CL:0002087!8.40e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002127;6.44e-16;1!CL:0000911;6.44e-16;1!CL:0000814;6.44e-16;1!CL:0000084;1.87e-09;25 | |ontology_enrichment_celltype_v019=CL:0002127;6.44e-16;1!CL:0000911;6.44e-16;1!CL:0000814;6.44e-16;1!CL:0000084;1.87e-09;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,6.44e-16,1;CL:0000914,6.44e-16,1;CL:0000911,6.44e-16,1;CL:0000814,6.44e-16,1;CL:0002042,6.44e-16,1;CL:0002039,6.44e-16,1;CL:0002040,6.44e-16,1;CL:0002041,6.44e-16,1;CL:0000084,1.85e-09,25;CL:0000827,1.85e-09,25;CL:0000893,1.29e-08,2;CL:0002489,1.29e-08,2;CL:0000809,1.29e-08,2;CL:0000808,1.29e-08,2;CL:0000894,1.29e-08,2;CL:0000806,1.29e-08,2;CL:0000807,1.29e-08,2;CL:0000805,1.29e-08,2;CL:0002425,1.29e-08,2;CL:0002032,1.04e-07,161;CL:0000837,1.04e-07,161;CL:0000037,2.41e-07,168;CL:0000988,6.50e-07,177;CL:0000838,7.18e-07,52;CL:0000542,9.72e-07,53;CL:0000051,9.72e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002425;1.29e-08;2 | |ontology_enrichment_development_v019=CL:0002425;1.29e-08;2 | ||
|ontology_enrichment_disease=DOID:2531!4.59e-31!51;DOID:0060083!4.59e-31!51;DOID:1240!8.60e-31!39;DOID:8692!3.51e-18!31;DOID:162!2.26e-12!235;DOID:1036!4.88e-12!8;DOID:14566!7.19e-12!239;DOID:0050686!9.13e-11!137 | |ontology_enrichment_disease=DOID:2531!4.59e-31!51;DOID:0060083!4.59e-31!51;DOID:1240!8.60e-31!39;DOID:8692!3.51e-18!31;DOID:162!2.26e-12!235;DOID:1036!4.88e-12!8;DOID:14566!7.19e-12!239;DOID:0050686!9.13e-11!137 | ||
|ontology_enrichment_disease_v019=DOID:1240;4.89e-19;39!DOID:2531;8.88e-18;51!DOID:0060083;8.88e-18;51!DOID:8692;3.46e-10;31!DOID:1036;3.57e-08;8 | |ontology_enrichment_disease_v019=DOID:1240;4.89e-19;39!DOID:2531;8.88e-18;51!DOID:0060083;8.88e-18;51!DOID:8692;3.46e-10;31!DOID:1036;3.57e-08;8 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,1.68e-28,39;DOID:2531,9.32e-27,51;DOID:0060083,9.32e-27,51;DOID:8692,2.27e-11,31;DOID:0050686,3.01e-09,137;DOID:1036,3.63e-08,8 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.0821005894499457,0.393553906568396,0,0,0,0,0,0,0.387336002901508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0.637130828648193,0,0.950452044448374,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9843441113657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.577076851905779,0.497992903438899,7.97131363644112,0,0.383010740264733,0,0,0.280797178113459,0.228234679033192,0,2.50634477090067,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,1.35227839237992,0.99921590399346,1.4098700508785,0.748562161632879,0,0,1.5602073798847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0.332423363800313,0.451191321234361,0.392125068635479,0.839107934879214,0.569261198172555,15.2579115821164,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,6.76455387365216,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.146178634172371,0.246346371159628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17372795087739,6.45500771418748,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,3.62764027005765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0,0,0,0.215927591218621,0,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0,0,0,0.250707539292375,0.757786982182394,1.60778478093707,0,0,0.213233981900981,0,0.0645889098360061,0.620747142958579,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.0821005894499457,0.393553906568396,0,0,0,0,0,0,0.387336002901508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0.637130828648193,0,0.950452044448374,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9843441113657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.577076851905779,0.497992903438899,7.97131363644112,0,0.383010740264733,0,0,0.280797178113459,0.228234679033192,0,2.50634477090067,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,1.35227839237992,0.99921590399346,1.4098700508785,0.748562161632879,0,0,1.5602073798847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0.332423363800313,0.451191321234361,0.392125068635479,0.839107934879214,0.569261198172555,15.2579115821164,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,6.76455387365216,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.146178634172371,0.246346371159628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17372795087739,6.45500771418748,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,3.62764027005765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0,0,0,0.215927591218621,0,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0,0,0,0.250707539292375,0.757786982182394,1.60778478093707,0,0,0.213233981900981,0,0.0645889098360061,0.620747142958579,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:226613592..226613598,- | |short_description=p@chr1:226613592..226613598,- | ||
}} | }} |
Latest revision as of 04:34, 28 July 2015
Short description: | p@chr1:226613592..226613598, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:226613592..226613598, - |
Coexpression cluster: | C2572_NK_chronic_embryonic_lymphoma_epithelioid_acute_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 6.44e-16 | 1 |
immature NK T cell | 6.44e-16 | 1 |
effector T cell | 6.44e-16 | 1 |
mature NK T cell | 6.44e-16 | 1 |
immature NK T cell stage IV | 6.44e-16 | 1 |
immature NK T cell stage I | 6.44e-16 | 1 |
immature NK T cell stage II | 6.44e-16 | 1 |
immature NK T cell stage III | 6.44e-16 | 1 |
T cell | 1.85e-09 | 25 |
pro-T cell | 1.85e-09 | 25 |
thymocyte | 1.29e-08 | 2 |
double negative thymocyte | 1.29e-08 | 2 |
double-positive, alpha-beta thymocyte | 1.29e-08 | 2 |
DN4 thymocyte | 1.29e-08 | 2 |
DN1 thymic pro-T cell | 1.29e-08 | 2 |
DN2 thymocyte | 1.29e-08 | 2 |
DN3 thymocyte | 1.29e-08 | 2 |
immature single positive thymocyte | 1.29e-08 | 2 |
early T lineage precursor | 1.29e-08 | 2 |
hematopoietic oligopotent progenitor cell | 1.04e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.04e-07 | 161 |
hematopoietic stem cell | 2.41e-07 | 168 |
hematopoietic cell | 6.50e-07 | 177 |
lymphoid lineage restricted progenitor cell | 7.18e-07 | 52 |
lymphocyte | 9.72e-07 | 53 |
common lymphoid progenitor | 9.72e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.68e-28 | 39 |
hematologic cancer | 9.32e-27 | 51 |
immune system cancer | 9.32e-27 | 51 |
myeloid leukemia | 2.27e-11 | 31 |
organ system cancer | 3.01e-09 | 137 |
chronic leukemia | 3.63e-08 | 8 |