FFCP PHASE1:Hg19::chr11:134145533..134145544,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:134145533..134145544,+ | |||
|coexpression_cluster_id=C796 | |coexpression_cluster_id=C796 | ||
|description=CAGE_peak_at_chr11:134145533..134145544,+ | |description=CAGE_peak_at_chr11:134145533..134145544,+ | ||
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|ontology_enrichment_celltype=CL:0000084!2.78e-26!25;CL:0000827!2.78e-26!25;CL:0000791!6.13e-22!18;CL:0000789!6.13e-22!18;CL:0002420!6.13e-22!18;CL:0002419!6.13e-22!18;CL:0000790!6.13e-22!18;CL:0000624!4.65e-16!6;CL:0000838!2.78e-13!52;CL:0000542!6.15e-13!53;CL:0000051!6.15e-13!53;CL:0000625!1.32e-10!11;CL:0000898!4.71e-09!3 | |ontology_enrichment_celltype=CL:0000084!2.78e-26!25;CL:0000827!2.78e-26!25;CL:0000791!6.13e-22!18;CL:0000789!6.13e-22!18;CL:0002420!6.13e-22!18;CL:0002419!6.13e-22!18;CL:0000790!6.13e-22!18;CL:0000624!4.65e-16!6;CL:0000838!2.78e-13!52;CL:0000542!6.15e-13!53;CL:0000051!6.15e-13!53;CL:0000625!1.32e-10!11;CL:0000898!4.71e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000895;2.97e-19;1!CL:0000898;2.71e-07;3 | |ontology_enrichment_celltype_v019=CL:0000895;2.97e-19;1!CL:0000898;2.71e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000810,3.25e-19,1;CL:0000895,3.25e-19,1;CL:0002436,3.25e-19,1;CL:0002427,3.25e-19,1;CL:0002428,3.25e-19,1;CL:0002429,3.25e-19,1;CL:0002433,3.25e-19,1;CL:0002431,3.25e-19,1;CL:0002432,3.25e-19,1;CL:0000893,2.72e-10,2;CL:0002489,2.72e-10,2;CL:0000809,2.72e-10,2;CL:0000808,2.72e-10,2;CL:0000894,2.72e-10,2;CL:0000806,2.72e-10,2;CL:0000807,2.72e-10,2;CL:0000805,2.72e-10,2;CL:0002425,2.72e-10,2;CL:0000898,2.79e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.18e-19;1!CL:0002427;2.97e-19;1!UBERON:0007297;1.64e-10;2!CL:0002425;2.60e-10;2 | |ontology_enrichment_development_v019=UBERON:0005754;1.18e-19;1!CL:0002427;2.97e-19;1!UBERON:0007297;1.64e-10;2!CL:0002425;2.60e-10;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!2.07e-13!11;UBERON:0000473!1.38e-10!8;UBERON:0006947!5.52e-09!3;UBERON:0004054!5.52e-09!3;UBERON:0003101!1.53e-07!22;UBERON:0000079!1.53e-07!22;UBERON:0005904!8.26e-07!4 | |ontology_enrichment_uberon=UBERON:0003135!2.07e-13!11;UBERON:0000473!1.38e-10!8;UBERON:0006947!5.52e-09!3;UBERON:0004054!5.52e-09!3;UBERON:0003101!1.53e-07!22;UBERON:0000079!1.53e-07!22;UBERON:0005904!8.26e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.31e-25;3!UBERON:0004054;4.31e-25;3!UBERON:0000998;1.18e-19;1!UBERON:0006868;1.18e-19;1!UBERON:0001000;2.97e-19;1!UBERON:0005352;2.97e-19;1!UBERON:0005904;4.29e-19;4!UBERON:0000058;3.25e-08;10!UBERON:0003135;1.51e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0006947;4.31e-25;3!UBERON:0004054;4.31e-25;3!UBERON:0000998;1.18e-19;1!UBERON:0006868;1.18e-19;1!UBERON:0001000;2.97e-19;1!UBERON:0005352;2.97e-19;1!UBERON:0005904;4.29e-19;4!UBERON:0000058;3.25e-08;10!UBERON:0003135;1.51e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.38e-25,3;UBERON:0004054,3.38e-25,3;UBERON:0000998,1.08e-19,1;UBERON:0006868,1.08e-19,1;UBERON:0001000,2.25e-19,1;UBERON:0005352,2.25e-19,1;UBERON:0005904,3.57e-19,4;UBERON:0003135,1.42e-07,11 | |||
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| ||
|short_description=p@chr11:134145533..134145544,+ | |short_description=p@chr11:134145533..134145544,+ | ||
}} | }} |
Latest revision as of 20:11, 23 July 2015
Short description: | p@chr11:134145533..134145544, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:134145533..134145544, + |
Coexpression cluster: | C796_acute_chronic_spleen_CD4_CD19_thymus_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 3.25e-19 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.25e-19 | 1 |
mature CD4 single-positive thymocyte | 3.25e-19 | 1 |
resting double-positive thymocyte | 3.25e-19 | 1 |
double-positive blast | 3.25e-19 | 1 |
CD69-positive double-positive thymocyte | 3.25e-19 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 3.25e-19 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.25e-19 | 1 |
CD24-positive, CD4 single-positive thymocyte | 3.25e-19 | 1 |
thymocyte | 2.72e-10 | 2 |
double negative thymocyte | 2.72e-10 | 2 |
double-positive, alpha-beta thymocyte | 2.72e-10 | 2 |
DN4 thymocyte | 2.72e-10 | 2 |
DN1 thymic pro-T cell | 2.72e-10 | 2 |
DN2 thymocyte | 2.72e-10 | 2 |
DN3 thymocyte | 2.72e-10 | 2 |
immature single positive thymocyte | 2.72e-10 | 2 |
early T lineage precursor | 2.72e-10 | 2 |
naive T cell | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.38e-25 | 3 |
internal male genitalia | 3.38e-25 | 3 |
seminal vesicle | 1.08e-19 | 1 |
seminal fluid secreting gland | 1.08e-19 | 1 |
vas deferens | 2.25e-19 | 1 |
spermatic cord | 2.25e-19 | 1 |
duct of male reproductive system | 3.57e-19 | 4 |
male reproductive organ | 1.42e-07 | 11 |