FFCP PHASE1:Hg19::chr2:15694960..15694970,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:15694960..15694970,- | |||
|coexpression_cluster_id=C85 | |coexpression_cluster_id=C85 | ||
|description=CAGE_peak_at_chr2:15694960..15694970,- | |description=CAGE_peak_at_chr2:15694960..15694970,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:1000306!2.53e-07!4;CL:0002547!2.53e-07!4 | |ontology_enrichment_celltype=CL:1000306!2.53e-07!4;CL:0002547!2.53e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000167;3.67e-23;1!CL:0000164;3.67e-23;1!CL:0000502;3.67e-23;1!CL:0000172;3.67e-23;1!CL:0000173;3.67e-23;1!CL:0000333;1.08e-18;5!CL:0002321;7.31e-07;15!CL:0000569;8.85e-07;4 | |ontology_enrichment_celltype_v019=CL:0000167;3.67e-23;1!CL:0000164;3.67e-23;1!CL:0000502;3.67e-23;1!CL:0000172;3.67e-23;1!CL:0000173;3.67e-23;1!CL:0000333;1.08e-18;5!CL:0002321;7.31e-07;15!CL:0000569;8.85e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.62e-23,1;CL:0000164,2.62e-23,1;CL:0000502,2.62e-23,1;CL:0000172,2.62e-23,1;CL:0000173,2.62e-23,1;CL:0002351,2.62e-23,1;CL:0000569,9.11e-07,4;CL:0000011,9.11e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002351;3.67e-23;1!CL:0000011;8.85e-07;4 | |ontology_enrichment_development_v019=CL:0002351;3.67e-23;1!CL:0000011;8.85e-07;4 | ||
|ontology_enrichment_disease=DOID:154!4.56e-08!2;DOID:4236!4.56e-08!2;DOID:1909!1.46e-07!2 | |ontology_enrichment_disease=DOID:154!4.56e-08!2;DOID:4236!4.56e-08!2;DOID:1909!1.46e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:169;1.31e-33;6!DOID:4430;3.67e-23;1!DOID:171;1.67e-20;10!DOID:3095;1.06e-09;22!DOID:2994;1.06e-09;22 | |ontology_enrichment_disease_v019=DOID:169;1.31e-33;6!DOID:4430;3.67e-23;1!DOID:171;1.67e-20;10!DOID:3095;1.06e-09;22!DOID:2994;1.06e-09;22 | ||
|ontology_enrichment_disease_v019_2=DOID:169,8.40e-34,6;DOID:4430,2.62e-23,1;DOID:171,1.28e-20,10;DOID:3095,9.40e-10,22;DOID:2994,9.40e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000415!2.53e-07!4;UBERON:0007240!2.53e-07!4;UBERON:0005742!2.53e-07!4;UBERON:0005734!2.53e-07!4;UBERON:0004664!2.53e-07!4;UBERON:0004663!2.53e-07!4 | |ontology_enrichment_uberon=UBERON:0000415!2.53e-07!4;UBERON:0007240!2.53e-07!4;UBERON:0005742!2.53e-07!4;UBERON:0005734!2.53e-07!4;UBERON:0004664!2.53e-07!4;UBERON:0004663!2.53e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.08e-18;5!UBERON:0002410;1.08e-18;5!UBERON:0000010;7.77e-11;8!UBERON:0002119;6.87e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000013;1.08e-18;5!UBERON:0002410;1.08e-18;5!UBERON:0000010;7.77e-11;8!UBERON:0002119;6.87e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,8.66e-19,5;UBERON:0002410,8.66e-19,5;UBERON:0000010,6.87e-11,8;UBERON:0002119,6.87e-07,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.640695746278505,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.184161977871793,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16004861950546,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.2023155617111,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0.868124974666461,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627865836814451,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0.353024506766001,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0.288180834308212,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,3.83004754662109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0.285465333544967,0,0,0,0,0.467426619694449,0,0.189403005275089,0,0,1.14420034198462,0.151230923763239,0,0,0,4.04822800947244,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,1.11903606175556,0.622077260032973,9.97576096168483,0,1.41539347670307,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.426067023795788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17838273550813,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533636729388577,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr2:15694960..15694970,- | |short_description=p@chr2:15694960..15694970,- | ||
}} | }} |
Latest revision as of 01:33, 29 July 2015
Short description: | p@chr2:15694960..15694970, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:15694960..15694970, - |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.62e-23 | 1 |
enteroendocrine cell | 2.62e-23 | 1 |
type D enteroendocrine cell | 2.62e-23 | 1 |
somatostatin secreting cell | 2.62e-23 | 1 |
pancreatic D cell | 2.62e-23 | 1 |
progenitor cell of endocrine pancreas | 2.62e-23 | 1 |
cardiac mesenchymal cell | 9.11e-07 | 4 |
migratory trunk neural crest cell | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 8.66e-19 | 5 |
autonomic nervous system | 8.66e-19 | 5 |
peripheral nervous system | 6.87e-11 | 8 |
left ovary | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.40e-34 | 6 |
somatostatinoma | 2.62e-23 | 1 |
neuroectodermal tumor | 1.28e-20 | 10 |
germ cell and embryonal cancer | 9.40e-10 | 22 |
germ cell cancer | 9.40e-10 | 22 |