FFCP PHASE1:Hg19::chr4:175204540..175204549,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80817 | |EntrezGene=80817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29356 | |HGNC=29356 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C0F1 | |UniProt=Q9C0F1 | ||
|association_with_transcript=-278bp_to_ENST00000503780,NM_001040157,uc003itr.2_5end | |association_with_transcript=-278bp_to_ENST00000503780,NM_001040157,uc003itr.2_5end | ||
|cluster_id=chr4:175204540..175204549,+ | |||
|coexpression_cluster_id=C85 | |coexpression_cluster_id=C85 | ||
|description=CAGE_peak_11_at_CEP44_5end | |description=CAGE_peak_11_at_CEP44_5end | ||
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|ontology_enrichment_celltype=CL:0000738!2.56e-12!140;CL:0002087!6.88e-11!119;CL:0000037!1.01e-10!172;CL:0000566!1.01e-10!172;CL:0000988!2.17e-10!182;CL:0002032!3.31e-09!165;CL:0000837!3.31e-09!165;CL:0000875!1.83e-08!3;CL:0002396!1.83e-08!3;CL:0002031!2.03e-08!124;CL:0000767!3.72e-08!3;CL:0000842!1.02e-07!3;CL:0000766!3.36e-07!76;CL:0000860!4.41e-07!45 | |ontology_enrichment_celltype=CL:0000738!2.56e-12!140;CL:0002087!6.88e-11!119;CL:0000037!1.01e-10!172;CL:0000566!1.01e-10!172;CL:0000988!2.17e-10!182;CL:0002032!3.31e-09!165;CL:0000837!3.31e-09!165;CL:0000875!1.83e-08!3;CL:0002396!1.83e-08!3;CL:0002031!2.03e-08!124;CL:0000767!3.72e-08!3;CL:0000842!1.02e-07!3;CL:0000766!3.36e-07!76;CL:0000860!4.41e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.78e-36;5!CL:0000313;2.54e-21;1!CL:0002321;1.15e-12;15!CL:0000159;2.35e-11;2!CL:0002535;2.35e-11;2!CL:1000415;2.73e-11;2 | |ontology_enrichment_celltype_v019=CL:0000333;1.78e-36;5!CL:0000313;2.54e-21;1!CL:0002321;1.15e-12;15!CL:0000159;2.35e-11;2!CL:0002535;2.35e-11;2!CL:1000415;2.73e-11;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.82e-21,1;CL:0002535,2.23e-11,2;CL:0000159,2.47e-11,2;CL:1000415,2.73e-11,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;1.52e-30;6!DOID:2152;2.54e-21;1!DOID:171;1.21e-18;10!DOID:4468;3.70e-11;2!DOID:3095;7.82e-09;22!DOID:2994;7.82e-09;22!DOID:120;2.90e-07;27!DOID:193;8.42e-07;29 | |ontology_enrichment_disease_v019=DOID:169;1.52e-30;6!DOID:2152;2.54e-21;1!DOID:171;1.21e-18;10!DOID:4468;3.70e-11;2!DOID:3095;7.82e-09;22!DOID:2994;7.82e-09;22!DOID:120;2.90e-07;27!DOID:193;8.42e-07;29 | ||
|ontology_enrichment_disease_v019_2=DOID:169,1.38e-30,6;DOID:2152,2.82e-21,1;DOID:171,1.14e-18,10;DOID:4468,3.70e-11,2;DOID:0050687,7.66e-11,143;DOID:3095,7.61e-09,22;DOID:2994,7.61e-09,22;DOID:162,6.25e-08,235;DOID:14566,9.40e-08,239;DOID:120,2.90e-07,27;DOID:193,8.42e-07,29 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.78e-36;5!UBERON:0002410;1.78e-36;5!UBERON:0004911;2.54e-21;1!UBERON:0000010;1.24e-20;8!UBERON:0006955;2.35e-11;2!UBERON:0004909;2.35e-11;2!UBERON:0004801;2.35e-11;2!UBERON:0002110;5.93e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0000013;1.78e-36;5!UBERON:0002410;1.78e-36;5!UBERON:0004911;2.54e-21;1!UBERON:0000010;1.24e-20;8!UBERON:0006955;2.35e-11;2!UBERON:0004909;2.35e-11;2!UBERON:0004801;2.35e-11;2!UBERON:0002110;5.93e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.57e-36,5;UBERON:0002410,1.57e-36,5;UBERON:0004911,2.82e-21,1;UBERON:0000010,1.16e-20,8;UBERON:0006955,2.23e-11,2;UBERON:0004801,2.23e-11,2;UBERON:0004909,2.47e-11,2;UBERON:0002110,5.93e-08,3;UBERON:0006242,5.93e-08,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0.619412741790207,0,0,0.236482229888585,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0.285012743741249,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02319297425131,0,0.123084805461069,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0.225595660617181,0,0.335643173951685,0.569261198172555,0,0,1.30586246527318,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,2.34661659281764,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52261293648624,6.68513830659427,0,1.41972529649618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0.177404740325278,0.230467975111559,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,1.16241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,3.02009665854039,0,0,0,0,0,0,0,1.79055697645231,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@CEP44 | |short_description=p11@CEP44 | ||
}} | }} |
Latest revision as of 20:16, 16 September 2015
Short description: | p11@CEP44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CEP44_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | -278bp_to_ENST00000503780, NM_001040157, uc003itr.2_5end |
EntrezGene: | CEP44 |
HGNC: | 29356 |
UniProt: | Q9C0F1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.82e-21 | 1 |
epithelial cell of cervix | 2.23e-11 | 2 |
seromucus secreting cell | 2.47e-11 | 2 |
epithelial cell of gall bladder | 2.73e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.57e-36 | 5 |
autonomic nervous system | 1.57e-36 | 5 |
epithelium of female gonad | 2.82e-21 | 1 |
peripheral nervous system | 1.16e-20 | 8 |
uterine epithelium | 2.23e-11 | 2 |
cervix epithelium | 2.23e-11 | 2 |
epithelium of gonad | 2.47e-11 | 2 |
gallbladder | 5.93e-08 | 3 |
gall bladder primordium | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.38e-30 | 6 |
ovary epithelial cancer | 2.82e-21 | 1 |
neuroectodermal tumor | 1.14e-18 | 10 |
clear cell adenocarcinoma | 3.70e-11 | 2 |
cell type cancer | 7.66e-11 | 143 |
germ cell and embryonal cancer | 7.61e-09 | 22 |
germ cell cancer | 7.61e-09 | 22 |
cancer | 6.25e-08 | 235 |
disease of cellular proliferation | 9.40e-08 | 239 |
female reproductive organ cancer | 2.90e-07 | 27 |
reproductive organ cancer | 8.42e-07 | 29 |