FFCP PHASE1:Hg19::chr1:22970487..22970507,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:22970487..22970507,+
|short_description=p3@C1QC
|description=CAGE_peak_3_at_C1QC_5end
|association_with_transcript=-9bp_to_AB528084,AM392881,AM393232,AM393...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=714 | |EntrezGene=714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1245 | |HGNC=1245 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_AB528084,AM392881,AM393232,AM393519,CU679233_5end | |||
|cluster_id=chr1:22970487..22970507,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_3_at_C1QC_5end | |||
|id=chr1:22970487..22970507,+ | |||
|ontology_enrichment_celltype=CL:0002619!1.26e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002619;3.49e-33;3!CL:0000840;1.18e-16;5!CL:0000990;2.69e-11;8!CL:0000451;2.44e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,3.49e-33,3;CL:0000840,1.18e-16,5;CL:0001029,1.18e-16,5;CL:0000990,2.69e-11,8;CL:0000451,2.45e-09,10;CL:0002194,4.21e-08,59;CL:0000576,4.21e-08,59;CL:0000040,4.21e-08,59;CL:0000559,4.21e-08,59;CL:0002009,8.10e-08,61;CL:0000839,3.52e-07,66;CL:0000557,4.59e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0000358;7.35e-12;1!UBERON:0010115;7.35e-12;1!UBERON:0004872;5.26e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.58e-51!115;UBERON:0001049!1.51e-15!57;UBERON:0005068!1.51e-15!57;UBERON:0006241!1.51e-15!57;UBERON:0007135!1.51e-15!57;UBERON:0005743!8.95e-14!86;UBERON:0001017!1.46e-13!82;UBERON:0002780!4.97e-12!41;UBERON:0001890!4.97e-12!41;UBERON:0006240!4.97e-12!41;UBERON:0002616!6.71e-12!59;UBERON:0000073!7.63e-12!94;UBERON:0001016!7.63e-12!94;UBERON:0003080!1.18e-11!42;UBERON:0003075!1.23e-11!86;UBERON:0007284!1.23e-11!86;UBERON:0001893!1.53e-11!34;UBERON:0002346!7.65e-11!90;UBERON:0000955!2.00e-10!69;UBERON:0006238!2.00e-10!69;UBERON:0002791!2.22e-10!33;UBERON:0002020!5.15e-10!34;UBERON:0003528!5.15e-10!34;UBERON:0002420!1.59e-09!9;UBERON:0007245!1.59e-09!9;UBERON:0010009!1.59e-09!9;UBERON:0010011!1.59e-09!9;UBERON:0000454!1.59e-09!9;UBERON:0002308!1.69e-09!9;UBERON:0000125!1.69e-09!9;UBERON:0001869!3.99e-09!32;UBERON:0009663!5.37e-09!7;UBERON:0000062!6.17e-08!511;UBERON:0003056!7.51e-08!61;UBERON:0002298!2.35e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.64e-19;5!UBERON:0005057;1.64e-19;5!UBERON:0002106;3.59e-15;3!UBERON:0000029;5.62e-12;1!UBERON:0002363;7.35e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.46e-15,3;UBERON:0004854,3.46e-15,3;UBERON:0009034,3.46e-15,3;UBERON:0002095,3.46e-15,3;UBERON:0004782,3.46e-15,3;UBERON:0003281,3.46e-15,3;UBERON:0009664,3.46e-15,3;UBERON:0002296,3.46e-15,3;UBERON:0005602,3.46e-15,3;UBERON:0001179,3.46e-15,3;UBERON:0006293,3.46e-15,3;UBERON:0004177,4.16e-14,7;UBERON:0005057,4.16e-14,7;UBERON:0002405,3.96e-12,93;UBERON:0000029,5.62e-12,1;UBERON:0002363,7.76e-12,1;UBERON:0007645,7.76e-12,1;UBERON:0007647,7.76e-12,1;UBERON:0010115,7.76e-12,1;UBERON:0002193,3.08e-10,108;UBERON:0002390,2.21e-09,98;UBERON:0003061,2.21e-09,98 | |||
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| ||
|short_description=p3@C1QC | |||
}} | }} |
Latest revision as of 06:09, 16 September 2015
Short description: | p3@C1QC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C1QC_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | -9bp_to_AB528084, AM392881, AM393232, AM393519, CU679233_5end |
EntrezGene: | C1QC |
HGNC: | 1245 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 3.49e-33 | 3 |
immature conventional dendritic cell | 1.18e-16 | 5 |
common dendritic progenitor | 1.18e-16 | 5 |
conventional dendritic cell | 2.69e-11 | 8 |
dendritic cell | 2.45e-09 | 10 |
monopoietic cell | 4.21e-08 | 59 |
monocyte | 4.21e-08 | 59 |
monoblast | 4.21e-08 | 59 |
promonocyte | 4.21e-08 | 59 |
macrophage dendritic cell progenitor | 8.10e-08 | 61 |
myeloid lineage restricted progenitor cell | 3.52e-07 | 66 |
granulocyte monocyte progenitor cell | 4.59e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.46e-15 | 3 |
gastrointestinal system mesentery | 3.46e-15 | 3 |
stomach region | 3.46e-15 | 3 |
mesentery | 3.46e-15 | 3 |
gastrointestinal system serosa | 3.46e-15 | 3 |
mesentery of stomach | 3.46e-15 | 3 |
gut mesentery | 3.46e-15 | 3 |
dorsal mesentery | 3.46e-15 | 3 |
dorsal mesogastrium | 3.46e-15 | 3 |
peritoneal cavity | 3.46e-15 | 3 |
spleen primordium | 3.46e-15 | 3 |
hemopoietic organ | 4.16e-14 | 7 |
immune organ | 4.16e-14 | 7 |
immune system | 3.96e-12 | 93 |
lymph node | 5.62e-12 | 1 |
dura mater | 7.76e-12 | 1 |
future meninx | 7.76e-12 | 1 |
ectomeninx | 7.76e-12 | 1 |
future dura mater | 7.76e-12 | 1 |
hemolymphoid system | 3.08e-10 | 108 |
hematopoietic system | 2.21e-09 | 98 |
blood island | 2.21e-09 | 98 |