FFCP PHASE1:Hg19::chr1:24438618..24438632,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:24438618..24438632,-
|short_description=p1@MYOM3
|description=CAGE_peak_1_at_MYOM3_5end
|association_with_transcript=32bp_to_ENST00000329601,ENST0000033096...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=127294 | |EntrezGene=127294 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26679 | |HGNC=26679 | ||
|TSSclassifier=strong | |||
|UniProt=A6NIU4,A6NI63,Q5VTT5 | |UniProt=A6NIU4,A6NI63,Q5VTT5 | ||
|association_with_transcript=32bp_to_ENST00000329601,ENST00000330966,ENST00000374434,NM_152372,uc001bin.3,uc001bio.2_5end | |||
|cluster_id=chr1:24438618..24438632,- | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_1_at_MYOM3_5end | |||
|id=chr1:24438618..24438632,- | |||
|ontology_enrichment_celltype=CL:0000188!2.17e-11!9;CL:0002621!8.37e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000188;3.61e-11;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,4.04e-11,9 | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.20e-11;4!UBERON:0007284;8.20e-11;4!UBERON:0003104;2.53e-09;31!UBERON:0006603;3.90e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.90e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.90e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.91e-15!115;UBERON:0003103!1.07e-09!69;UBERON:0003978!2.07e-08!3;UBERON:0009751!2.07e-08!3;UBERON:0000946!2.07e-08!3;UBERON:0002523!2.07e-08!3;UBERON:0005983!2.07e-08!3;UBERON:0002165!2.07e-08!3;UBERON:0002062!2.07e-08!3;UBERON:0007280!2.07e-08!3;UBERON:0004151!2.12e-08!3;UBERON:0000166!2.63e-07!21;UBERON:0001949!8.37e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.75e-20;16!UBERON:0002036;1.75e-20;16!UBERON:0003978;2.89e-14;3!UBERON:0000946;2.89e-14;3!UBERON:0004151;2.96e-14;3!UBERON:0007100;4.49e-13;25!UBERON:0005090;1.76e-10;2!UBERON:0001630;1.76e-10;2!UBERON:0000341;3.32e-10;2!UBERON:0002133;5.19e-10;2!UBERON:0002081;5.80e-10;2!UBERON:0002385;9.46e-10;31!UBERON:0001015;9.46e-10;31!UBERON:0000383;9.46e-10;31!UBERON:0003127;1.36e-09;2!UBERON:0001829;2.10e-09;2!UBERON:0001041;2.89e-07;14!UBERON:0001723;3.74e-07;3!UBERON:0001033;3.74e-07;3!UBERON:0001044;8.39e-07;6!UBERON:0003293;8.39e-07;6!UBERON:0003294;8.39e-07;6!UBERON:0010047;8.39e-07;6!UBERON:0003408;8.39e-07;6!UBERON:0000167;8.39e-07;6!UBERON:0000948;9.51e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.87e-16,114;UBERON:0003103,9.22e-15,68;UBERON:0003978,2.89e-14,3;UBERON:0009751,2.89e-14,3;UBERON:0000946,2.89e-14,3;UBERON:0002523,2.89e-14,3;UBERON:0005983,2.89e-14,3;UBERON:0002165,2.89e-14,3;UBERON:0002062,2.89e-14,3;UBERON:0007280,2.89e-14,3;UBERON:0004151,3.02e-14,3;UBERON:0007100,5.59e-12,27;UBERON:0005090,1.76e-10,2;UBERON:0001630,1.76e-10,2;UBERON:0000341,3.32e-10,2;UBERON:0002133,5.19e-10,2;UBERON:0002081,5.93e-10,2;UBERON:0010227,5.93e-10,2;UBERON:0003127,1.36e-09,2;UBERON:0001829,2.19e-09,2;UBERON:0001723,3.74e-07,3;UBERON:0001033,3.74e-07,3;UBERON:0010056,3.74e-07,3;UBERON:0001044,8.75e-07,6;UBERON:0003293,8.75e-07,6;UBERON:0003294,8.75e-07,6;UBERON:0010047,8.75e-07,6;UBERON:0000167,8.75e-07,6 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0,0.506328996723799,0.0974370051611986,0,0,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80400793335198,0,0,0,0,0,0,0,1.38115775959256,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0.574265537996172,0,0,1.06337790121334,0.308097234229289,0.15350367472613,1.37836572484531,0,1.0151168573996,1.53407929348982,38.1947432924503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39524537815682,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,183.790281231423,0,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,16.9484868194769,0,0.0967563312890851,0,0,6.9832091871662,0.264768380074501,9.26521037200183,0,0,0,0,0,0,2.59752492456769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.7664338722624,99.9139448690941,45.2260005483393,67.092144167661,190.147139324501,169.387136198381,5.57622821639828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73100140845494,0,0,0,42.1670242560287,144.99814151003,4.32256514013075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0,0,2.19303106742873,73.4392544016155,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.627944742804112,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58136415292167,0,0,0,0,0,0,0,0,0,267.388109758601,181.610505328701,356.063030420827,35.9426134863763,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,7.79839781787719,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,1.21245917149183,0,0,0.103432995861895,136.043280452826,81.1799711291355,0,0.248298857183432,0,6.55565730265099,15.1587891718664,97.3193863099417,226.558445318456,7.27402172557545,3.72955468041917,40.9172238551596,0,0,0,0,42.2353696326218,0.244482888365733,0,0,7.44713036286797,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0,0.506328996723799,0.0974370051611986,0,0,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80400793335198,0,0,0,0,0,0,0,1.38115775959256,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0.574265537996172,0,0,1.06337790121334,0.308097234229289,0.15350367472613,1.37836572484531,0,1.0151168573996,1.53407929348982,38.1947432924503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39524537815682,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,183.790281231423,0,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,16.9484868194769,0,0.0967563312890851,0,0,6.9832091871662,0.264768380074501,9.26521037200183,0,0,0,0,0,0,2.59752492456769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.7664338722624,99.9139448690941,45.2260005483393,67.092144167661,190.147139324501,169.387136198381,5.57622821639828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73100140845494,0,0,0,42.1670242560287,144.99814151003,4.32256514013075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0,0,2.19303106742873,73.4392544016155,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.627944742804112,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58136415292167,0,0,0,0,0,0,0,0,0,267.388109758601,181.610505328701,356.063030420827,35.9426134863763,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,7.79839781787719,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,1.21245917149183,0,0,0.103432995861895,136.043280452826,81.1799711291355,0,0.248298857183432,0,6.55565730265099,15.1587891718664,97.3193863099417,226.558445318456,7.27402172557545,3.72955468041917,40.9172238551596,0,0,0,0,42.2353696326218,0.244482888365733,0,0,7.44713036286797,0 | ||
|short_description=p1@MYOM3 | |||
}} | }} |
Latest revision as of 20:39, 16 September 2015
Short description: | p1@MYOM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYOM3_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 32bp_to_ENST00000329601, ENST00000330966, ENST00000374434, NM_152372, uc001bin.3, uc001bio.2_5end |
EntrezGene: | MYOM3 |
HGNC: | 26679 |
UniProt: | A6NIU4A6NI63Q5VTT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 4.04e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.87e-16 | 114 |
compound organ | 9.22e-15 | 68 |
valve | 2.89e-14 | 3 |
cardiac mesenchyme | 2.89e-14 | 3 |
cardial valve | 2.89e-14 | 3 |
tunica intima | 2.89e-14 | 3 |
heart layer | 2.89e-14 | 3 |
endocardium | 2.89e-14 | 3 |
endocardial cushion | 2.89e-14 | 3 |
presumptive endocardium | 2.89e-14 | 3 |
cardiac chamber | 3.02e-14 | 3 |
primary circulatory organ | 5.59e-12 | 27 |
muscle structure | 1.76e-10 | 2 |
muscle organ | 1.76e-10 | 2 |
throat | 3.32e-10 | 2 |
atrioventricular valve | 5.19e-10 | 2 |
cardiac atrium | 5.93e-10 | 2 |
future cardiac atrium | 5.93e-10 | 2 |
open tracheal system trachea | 1.36e-09 | 2 |
major salivary gland | 2.19e-09 | 2 |
tongue | 3.74e-07 | 3 |
gustatory system | 3.74e-07 | 3 |
future tongue | 3.74e-07 | 3 |
saliva-secreting gland | 8.75e-07 | 6 |
gland of oral region | 8.75e-07 | 6 |
gland of foregut | 8.75e-07 | 6 |
oral gland | 8.75e-07 | 6 |
oral cavity | 8.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.90e-10 | 2 |