FFCP PHASE1:Hg19::chr1:158301019..158301040,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=910 | |EntrezGene=910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1635 | |HGNC=1635 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-167bp_to_uc001frw.2_5end | |association_with_transcript=-167bp_to_uc001frw.2_5end | ||
|cluster_id=chr1:158301019..158301040,- | |||
|coexpression_cluster_id=C46 | |coexpression_cluster_id=C46 | ||
|description=CAGE_peak_7_at_CD1B_5end | |description=CAGE_peak_7_at_CD1B_5end | ||
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|ontology_enrichment_celltype=CL:0000840!3.13e-23!5;CL:0001029!3.13e-23!5;CL:0000990!1.00e-15!8;CL:0000451!5.49e-13!10;CL:0002583!8.09e-09!2 | |ontology_enrichment_celltype=CL:0000840!3.13e-23!5;CL:0001029!3.13e-23!5;CL:0000990!1.00e-15!8;CL:0000451!5.49e-13!10;CL:0002583!8.09e-09!2 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.07e-17;2 | |ontology_enrichment_development_v019=UBERON:0006965;1.07e-17;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.90e-20!7;UBERON:0002370!1.42e-16!4;UBERON:0005058!1.42e-16!4;UBERON:0009113!1.42e-16!4;UBERON:0003295!1.42e-16!4;UBERON:0005562!1.42e-16!4;UBERON:0002146!2.25e-16!1;UBERON:0005623!2.25e-16!1;UBERON:0000974!1.41e-14!10;UBERON:0003351!2.25e-11!6;UBERON:0000341!5.49e-09!2;UBERON:0003408!3.54e-07!10;UBERON:0001042!3.54e-07!10;UBERON:0009145!3.54e-07!10 | |ontology_enrichment_uberon=UBERON:0004177!1.90e-20!7;UBERON:0002370!1.42e-16!4;UBERON:0005058!1.42e-16!4;UBERON:0009113!1.42e-16!4;UBERON:0003295!1.42e-16!4;UBERON:0005562!1.42e-16!4;UBERON:0002146!2.25e-16!1;UBERON:0005623!2.25e-16!1;UBERON:0000974!1.41e-14!10;UBERON:0003351!2.25e-11!6;UBERON:0000341!5.49e-09!2;UBERON:0003408!3.54e-07!10;UBERON:0001042!3.54e-07!10;UBERON:0009145!3.54e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.45e-66;2!UBERON:0005058;1.45e-66;2!UBERON:0009113;1.45e-66;2!UBERON:0004177;2.08e-27;5!UBERON:0005057;2.08e-27;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;1.45e-66;2!UBERON:0005058;1.45e-66;2!UBERON:0009113;1.45e-66;2!UBERON:0004177;2.08e-27;5!UBERON:0005057;2.08e-27;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.98e-34,4;UBERON:0005058,5.98e-34,4;UBERON:0009113,5.98e-34,4;UBERON:0003295,5.98e-34,4;UBERON:0005562,5.98e-34,4;UBERON:0003351,4.86e-23,6;UBERON:0004177,6.48e-20,7;UBERON:0005057,6.48e-20,7;UBERON:0000974,2.84e-14,10;UBERON:0003408,2.84e-14,10;UBERON:0001042,2.84e-14,10;UBERON:0009145,2.84e-14,10;UBERON:0006562,4.52e-13,11;UBERON:0009722,4.52e-13,11;UBERON:0007690,4.52e-13,11;UBERON:0008814,2.25e-08,18;UBERON:0001557,5.54e-08,19 | |||
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|short_description=p7@CD1B | |short_description=p7@CD1B | ||
}} | }} |
Latest revision as of 20:42, 17 September 2015
Short description: | p7@CD1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CD1B_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | -167bp_to_uc001frw.2_5end |
EntrezGene: | CD1B |
HGNC: | 1635 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 5.98e-34 | 4 |
hemolymphoid system gland | 5.98e-34 | 4 |
thymic region | 5.98e-34 | 4 |
pharyngeal gland | 5.98e-34 | 4 |
thymus primordium | 5.98e-34 | 4 |
pharyngeal epithelium | 4.86e-23 | 6 |
hemopoietic organ | 6.48e-20 | 7 |
immune organ | 6.48e-20 | 7 |
neck | 2.84e-14 | 10 |
gland of gut | 2.84e-14 | 10 |
chordate pharynx | 2.84e-14 | 10 |
pharyngeal region of foregut | 2.84e-14 | 10 |
pharynx | 4.52e-13 | 11 |
entire pharyngeal arch endoderm | 4.52e-13 | 11 |
early pharyngeal endoderm | 4.52e-13 | 11 |
pharyngeal arch system | 2.25e-08 | 18 |
upper respiratory tract | 5.54e-08 | 19 |