FFCP PHASE1:Hg19::chr12:52908358..52908370,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-356bp_to_CU687195_5end | |association_with_transcript=-356bp_to_CU687195_5end | ||
|cluster_id=chr12:52908358..52908370,+ | |||
|description=CAGE_peak_11_at_CU687195_5end | |description=CAGE_peak_11_at_CU687195_5end | ||
|id=chr12:52908358..52908370,+ | |id=chr12:52908358..52908370,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.88e-35!43;CL:0002251!2.63e-24!21;CL:0000223!2.87e-24!59;CL:0000066!8.21e-15!254;CL:0002368!2.49e-14!13;CL:0002621!1.07e-12!3;CL:0002166!1.94e-12!3;CL:0002159!1.45e-10!13;CL:0000244!1.04e-09!4;CL:0000731!1.04e-09!4;CL:0002327!1.36e-09!4;CL:0002202!3.17e-07!9;CL:0002632!3.17e-07!9 | |ontology_enrichment_celltype=CL:0002076!2.88e-35!43;CL:0002251!2.63e-24!21;CL:0000223!2.87e-24!59;CL:0000066!8.21e-15!254;CL:0002368!2.49e-14!13;CL:0002621!1.07e-12!3;CL:0002166!1.94e-12!3;CL:0002159!1.45e-10!13;CL:0000244!1.04e-09!4;CL:0000731!1.04e-09!4;CL:0002327!1.36e-09!4;CL:0002202!3.17e-07!9;CL:0002632!3.17e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.38e-17;42!CL:0002621;1.64e-15;3!CL:0002368;6.96e-14;13!CL:0002251;1.11e-13;20!CL:0002252;9.91e-13;1!CL:0002336;2.91e-12;1!CL:0002261;2.91e-12;1!CL:0002170;2.91e-12;1!CL:0000244;4.83e-12;4!CL:0000731;4.83e-12;4!CL:0000575;4.82e-07;2 | |ontology_enrichment_celltype_v019=CL:0002076;1.38e-17;42!CL:0002621;1.64e-15;3!CL:0002368;6.96e-14;13!CL:0002251;1.11e-13;20!CL:0002252;9.91e-13;1!CL:0002336;2.91e-12;1!CL:0002261;2.91e-12;1!CL:0002170;2.91e-12;1!CL:0000244;4.83e-12;4!CL:0000731;4.83e-12;4!CL:0000575;4.82e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.38e-20,42;CL:0002621,1.65e-15,3;CL:0000223,2.99e-14,58;CL:0002368,6.97e-14,13;CL:0002251,1.18e-13,20;CL:0002252,9.92e-13,1;CL:0002336,3.08e-12,1;CL:0002261,3.08e-12,1;CL:0002170,3.08e-12,1;CL:0000244,4.09e-12,4;CL:0000731,4.09e-12,4;CL:0000575,4.83e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;3.72e-07;58 | |ontology_enrichment_development_v019=CL:0000223;3.72e-07;58 | ||
|ontology_enrichment_disease=DOID:1749!3.69e-09!14 | |ontology_enrichment_disease=DOID:1749!3.69e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;2.91e-12;1!DOID:3149;2.91e-12;1!DOID:3451;9.27e-07;2!DOID:4159;9.27e-07;2!DOID:0060122;9.27e-07;2 | |ontology_enrichment_disease_v019=DOID:3151;2.91e-12;1!DOID:3149;2.91e-12;1!DOID:3451;9.27e-07;2!DOID:4159;9.27e-07;2!DOID:0060122;9.27e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,2.75e-12,1;DOID:3149,2.75e-12,1;DOID:3451,9.02e-07,2;DOID:4159,9.02e-07,2;DOID:0060122,9.02e-07,2 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.65e-15,3;UBERON:0000365,7.11e-10,5;UBERON:0005910,2.25e-08,6;UBERON:0004119,3.43e-08,160;UBERON:0000925,3.43e-08,160;UBERON:0006595,3.43e-08,160;UBERON:0003729,3.99e-08,13;UBERON:0005631,8.62e-08,14;UBERON:0000158,8.62e-08,14;UBERON:0003124,2.69e-07,7 | |||
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| ||
|short_description=p11@CU687195 | |short_description=p11@CU687195 | ||
}} | }} |
Latest revision as of 09:34, 24 July 2015
Short description: | p11@CU687195 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CU687195_5end |
Coexpression cluster: | NA |
Association with transcript: | -356bp_to_CU687195_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.38e-20 | 42 |
gingival epithelial cell | 1.65e-15 | 3 |
endodermal cell | 2.99e-14 | 58 |
respiratory epithelial cell | 6.97e-14 | 13 |
epithelial cell of alimentary canal | 1.18e-13 | 20 |
epithelial cell of esophagus | 9.92e-13 | 1 |
buccal mucosa cell | 3.08e-12 | 1 |
endothelial cell of viscerocranial mucosa | 3.08e-12 | 1 |
keratinized cell of the oral mucosa | 3.08e-12 | 1 |
transitional epithelial cell | 4.09e-12 | 4 |
urothelial cell | 4.09e-12 | 4 |
corneal epithelial cell | 4.83e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.65e-15 | 3 |
urothelium | 7.11e-10 | 5 |
transitional epithelium | 2.25e-08 | 6 |
endoderm-derived structure | 3.43e-08 | 160 |
endoderm | 3.43e-08 | 160 |
presumptive endoderm | 3.43e-08 | 160 |
mouth mucosa | 3.99e-08 | 13 |
extraembryonic membrane | 8.62e-08 | 14 |
membranous layer | 8.62e-08 | 14 |
chorion | 2.69e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.75e-12 | 1 |
keratoacanthoma | 2.75e-12 | 1 |
skin carcinoma | 9.02e-07 | 2 |
skin cancer | 9.02e-07 | 2 |
integumentary system cancer | 9.02e-07 | 2 |