FFCP PHASE1:Hg19::chr1:1562950..1562968,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=142678 | |EntrezGene=142678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30577 | |HGNC=30577 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=48bp_to_ENST00000464570_5end | |association_with_transcript=48bp_to_ENST00000464570_5end | ||
|cluster_id=chr1:1562950..1562968,+ | |||
|description=CAGE_peak_18_at_MIB2_5end | |description=CAGE_peak_18_at_MIB2_5end | ||
|id=chr1:1562950..1562968,+ | |id=chr1:1562950..1562968,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.63e-17!43;CL:0000066!1.45e-15!254;CL:0002368!3.57e-15!13;CL:0000223!3.28e-14!59;CL:0002202!5.92e-11!9;CL:0002632!5.92e-11!9;CL:0002251!8.72e-11!21;CL:0002159!4.39e-10!13;CL:0002328!1.82e-09!3;CL:0002150!3.07e-09!3;CL:0000861!3.07e-09!3;CL:0000362!5.97e-09!8;CL:0002621!1.46e-08!3;CL:0000240!7.39e-08!6;CL:0000311!7.39e-08!6;CL:0000079!7.39e-08!6;CL:0000237!7.39e-08!6;CL:0000036!7.39e-08!6;CL:0000357!7.39e-08!6;CL:0000114!7.39e-08!6;CL:0000575!7.06e-07!2 | |ontology_enrichment_celltype=CL:0002076!1.63e-17!43;CL:0000066!1.45e-15!254;CL:0002368!3.57e-15!13;CL:0000223!3.28e-14!59;CL:0002202!5.92e-11!9;CL:0002632!5.92e-11!9;CL:0002251!8.72e-11!21;CL:0002159!4.39e-10!13;CL:0002328!1.82e-09!3;CL:0002150!3.07e-09!3;CL:0000861!3.07e-09!3;CL:0000362!5.97e-09!8;CL:0002621!1.46e-08!3;CL:0000240!7.39e-08!6;CL:0000311!7.39e-08!6;CL:0000079!7.39e-08!6;CL:0000237!7.39e-08!6;CL:0000036!7.39e-08!6;CL:0000357!7.39e-08!6;CL:0000114!7.39e-08!6;CL:0000575!7.06e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.59e-22;14!CL:0002328;6.64e-21;3!CL:0002202;1.40e-18;9!CL:0002632;1.40e-18;9!CL:0000362;1.45e-18;9!CL:0000317;4.61e-14;2!CL:1000448;4.61e-14;2!CL:0002308;4.61e-14;2!CL:0000575;4.61e-14;2!CL:0002140;4.61e-14;2!CL:0000312;5.78e-13;5!CL:0002368;8.15e-13;13!CL:0000240;6.90e-11;6!CL:0000311;6.90e-11;6!CL:0000079;6.90e-11;6!CL:0000237;6.90e-11;6!CL:0002077;1.64e-10;34!CL:0000307;6.56e-10;3!CL:0002076;5.82e-08;42 | |ontology_enrichment_celltype_v019=CL:0002159;1.59e-22;14!CL:0002328;6.64e-21;3!CL:0002202;1.40e-18;9!CL:0002632;1.40e-18;9!CL:0000362;1.45e-18;9!CL:0000317;4.61e-14;2!CL:1000448;4.61e-14;2!CL:0002308;4.61e-14;2!CL:0000575;4.61e-14;2!CL:0002140;4.61e-14;2!CL:0000312;5.78e-13;5!CL:0002368;8.15e-13;13!CL:0000240;6.90e-11;6!CL:0000311;6.90e-11;6!CL:0000079;6.90e-11;6!CL:0000237;6.90e-11;6!CL:0002077;1.64e-10;34!CL:0000307;6.56e-10;3!CL:0002076;5.82e-08;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.45e-22,14;CL:0002328,1.07e-20,3;CL:0000362,2.10e-18,9;CL:0002202,2.34e-18,9;CL:0002632,2.34e-18,9;CL:0000575,1.93e-14,2;CL:0000317,7.87e-14,2;CL:1000448,7.87e-14,2;CL:0002308,7.87e-14,2;CL:0002140,7.87e-14,2;CL:0000066,3.34e-13,253;CL:0000076,4.58e-13,63;CL:0000312,6.28e-13,5;CL:0002368,1.16e-12,13;CL:0002077,1.65e-11,34;CL:0002076,2.03e-11,42;CL:0000240,7.39e-11,6;CL:0000311,7.39e-11,6;CL:0000079,7.39e-11,6;CL:0000237,7.39e-11,6;CL:0000036,7.39e-11,6;CL:0000357,7.39e-11,6;CL:0000114,7.39e-11,6;CL:0000068,8.97e-10,3;CL:0000069,8.97e-10,3;CL:0000307,8.97e-10,3;CL:0000377,8.97e-10,3;CL:0000223,6.98e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000357;6.90e-11;6!CL:0000114;6.90e-11;6!CL:0000377;6.56e-10;3!UBERON:0009143;7.09e-08;1 | |ontology_enrichment_development_v019=CL:0000357;6.90e-11;6!CL:0000114;6.90e-11;6!CL:0000377;6.56e-10;3!UBERON:0009143;7.09e-08;1 | ||
|ontology_enrichment_disease=DOID:305!3.47e-12!106;DOID:1749!4.93e-09!14;DOID:0050687!2.80e-07!143 | |ontology_enrichment_disease=DOID:305!3.47e-12!106;DOID:1749!4.93e-09!14;DOID:0050687!2.80e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;6.09e-12;14!DOID:3111;1.65e-08;1!DOID:3603;1.65e-08;1 | |ontology_enrichment_disease_v019=DOID:1749;6.09e-12;14!DOID:3111;1.65e-08;1!DOID:3603;1.65e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,6.17e-12,14;DOID:3111,1.65e-08,1;DOID:3603,1.65e-08,1;DOID:305,6.20e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.40e-14!72;UBERON:0004119!6.70e-13!169;UBERON:0000925!6.70e-13!169;UBERON:0006595!6.70e-13!169;UBERON:0000065!6.84e-13!53;UBERON:0000072!7.27e-11!46;UBERON:0001007!2.60e-10!155;UBERON:0001555!2.60e-10!155;UBERON:0007026!2.60e-10!155;UBERON:0000344!3.10e-10!12;UBERON:0004815!1.82e-09!3;UBERON:0002031!1.82e-09!3;UBERON:0003729!5.74e-09!5;UBERON:0007196!7.94e-09!14;UBERON:0001558!7.94e-09!14;UBERON:0000166!8.46e-09!21;UBERON:0001723!9.04e-09!3;UBERON:0001033!9.04e-09!3;UBERON:0010056!9.04e-09!3;UBERON:0001949!1.46e-08!3;UBERON:0001041!3.53e-08!98;UBERON:0006562!4.31e-08!11;UBERON:0000165!1.32e-07!28;UBERON:0000930!1.32e-07!28;UBERON:0004807!1.60e-07!28;UBERON:0002185!3.57e-07!4;UBERON:0003343!7.39e-07!4;UBERON:0004785!7.39e-07!4;UBERON:0004921!7.85e-07!129;UBERON:0004185!7.85e-07!129;UBERON:0000077!8.50e-07!130 | |ontology_enrichment_uberon=UBERON:0001004!1.40e-14!72;UBERON:0004119!6.70e-13!169;UBERON:0000925!6.70e-13!169;UBERON:0006595!6.70e-13!169;UBERON:0000065!6.84e-13!53;UBERON:0000072!7.27e-11!46;UBERON:0001007!2.60e-10!155;UBERON:0001555!2.60e-10!155;UBERON:0007026!2.60e-10!155;UBERON:0000344!3.10e-10!12;UBERON:0004815!1.82e-09!3;UBERON:0002031!1.82e-09!3;UBERON:0003729!5.74e-09!5;UBERON:0007196!7.94e-09!14;UBERON:0001558!7.94e-09!14;UBERON:0000166!8.46e-09!21;UBERON:0001723!9.04e-09!3;UBERON:0001033!9.04e-09!3;UBERON:0010056!9.04e-09!3;UBERON:0001949!1.46e-08!3;UBERON:0001041!3.53e-08!98;UBERON:0006562!4.31e-08!11;UBERON:0000165!1.32e-07!28;UBERON:0000930!1.32e-07!28;UBERON:0004807!1.60e-07!28;UBERON:0002185!3.57e-07!4;UBERON:0003343!7.39e-07!4;UBERON:0004785!7.39e-07!4;UBERON:0004921!7.85e-07!129;UBERON:0004185!7.85e-07!129;UBERON:0000077!8.50e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;6.64e-21;3!UBERON:0002031;6.64e-21;3!UBERON:0002419;4.61e-14;2!UBERON:0007771;4.61e-14;2!UBERON:0003297;4.61e-14;2!UBERON:0001821;4.61e-14;2!UBERON:0003487;4.61e-14;2!UBERON:0001820;4.61e-14;2!UBERON:0002185;9.01e-13;5!UBERON:0007196;4.42e-11;15!UBERON:0001558;4.42e-11;15!UBERON:0001003;4.52e-11;15!UBERON:0007376;4.52e-11;15!UBERON:0000485;2.90e-09;7!UBERON:0000344;3.10e-08;20!UBERON:0002372;7.09e-08;1!UBERON:0000997;7.09e-08;1!UBERON:0005056;7.09e-08;1!UBERON:0001961;7.09e-08;1!UBERON:0001744;7.09e-08;1!UBERON:0004176;7.09e-08;1!UBERON:0001042;7.09e-08;1!UBERON:0001735;7.09e-08;1!UBERON:0003343;1.22e-07;4!UBERON:0004785;1.22e-07;4!UBERON:0000964;1.81e-07;4!UBERON:0010409;1.81e-07;4!UBERON:0010371;4.21e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0004815;6.64e-21;3!UBERON:0002031;6.64e-21;3!UBERON:0002419;4.61e-14;2!UBERON:0007771;4.61e-14;2!UBERON:0003297;4.61e-14;2!UBERON:0001821;4.61e-14;2!UBERON:0003487;4.61e-14;2!UBERON:0001820;4.61e-14;2!UBERON:0002185;9.01e-13;5!UBERON:0007196;4.42e-11;15!UBERON:0001558;4.42e-11;15!UBERON:0001003;4.52e-11;15!UBERON:0007376;4.52e-11;15!UBERON:0000485;2.90e-09;7!UBERON:0000344;3.10e-08;20!UBERON:0002372;7.09e-08;1!UBERON:0000997;7.09e-08;1!UBERON:0005056;7.09e-08;1!UBERON:0001961;7.09e-08;1!UBERON:0001744;7.09e-08;1!UBERON:0004176;7.09e-08;1!UBERON:0001042;7.09e-08;1!UBERON:0001735;7.09e-08;1!UBERON:0003343;1.22e-07;4!UBERON:0004785;1.22e-07;4!UBERON:0000964;1.81e-07;4!UBERON:0010409;1.81e-07;4!UBERON:0010371;4.21e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.07e-20,3;UBERON:0002031,1.07e-20,3;UBERON:0002419,7.87e-14,2;UBERON:0007771,7.87e-14,2;UBERON:0003297,7.87e-14,2;UBERON:0001821,7.87e-14,2;UBERON:0003487,7.87e-14,2;UBERON:0001820,7.87e-14,2;UBERON:0005089,7.87e-14,2;UBERON:0005088,7.87e-14,2;UBERON:0002185,1.19e-12,5;UBERON:0001003,5.61e-11,15;UBERON:0007376,5.61e-11,15;UBERON:0007383,5.61e-11,15;UBERON:0007196,5.98e-11,15;UBERON:0001558,5.98e-11,15;UBERON:0000344,3.46e-08,20;UBERON:0000997,4.11e-08,1;UBERON:0005056,4.11e-08,1;UBERON:0002372,8.12e-08,1;UBERON:0001961,8.12e-08,1;UBERON:0001744,8.12e-08,1;UBERON:0001735,8.12e-08,1;UBERON:0000964,1.18e-07,4;UBERON:0010409,1.18e-07,4;UBERON:0004348,1.18e-07,4;UBERON:0005427,1.18e-07,4;UBERON:0003343,1.44e-07,4;UBERON:0004785,1.44e-07,4;UBERON:0000485,3.08e-07,9 | |||
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| ||
|short_description=p18@MIB2 | |short_description=p18@MIB2 | ||
}} | }} |
Latest revision as of 15:38, 17 September 2015
Short description: | p18@MIB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_MIB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_ENST00000464570_5end |
EntrezGene: | MIB2 |
HGNC: | 30577 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.45e-22 | 14 |
bronchial epithelial cell | 1.07e-20 | 3 |
epidermal cell | 2.10e-18 | 9 |
epithelial cell of tracheobronchial tree | 2.34e-18 | 9 |
epithelial cell of lower respiratory tract | 2.34e-18 | 9 |
corneal epithelial cell | 1.93e-14 | 2 |
sebum secreting cell | 7.87e-14 | 2 |
epithelial cell of sweat gland | 7.87e-14 | 2 |
epithelial cell of skin gland | 7.87e-14 | 2 |
acinar cell of sebaceous gland | 7.87e-14 | 2 |
epithelial cell | 3.34e-13 | 253 |
squamous epithelial cell | 4.58e-13 | 63 |
keratinocyte | 6.28e-13 | 5 |
respiratory epithelial cell | 1.16e-12 | 13 |
ecto-epithelial cell | 1.65e-11 | 34 |
endo-epithelial cell | 2.03e-11 | 42 |
stratified squamous epithelial cell | 7.39e-11 | 6 |
keratin accumulating cell | 7.39e-11 | 6 |
stratified epithelial cell | 7.39e-11 | 6 |
keratinizing barrier epithelial cell | 7.39e-11 | 6 |
epithelial fate stem cell | 7.39e-11 | 6 |
stratified epithelial stem cell | 7.39e-11 | 6 |
surface ectodermal cell | 7.39e-11 | 6 |
duct epithelial cell | 8.97e-10 | 3 |
branched duct epithelial cell | 8.97e-10 | 3 |
tracheal epithelial cell | 8.97e-10 | 3 |
tracheoblast | 8.97e-10 | 3 |
endodermal cell | 6.98e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.07e-20 | 3 |
epithelium of bronchus | 1.07e-20 | 3 |
skin gland | 7.87e-14 | 2 |
epidermis gland | 7.87e-14 | 2 |
gland of integumental system | 7.87e-14 | 2 |
sebaceous gland | 7.87e-14 | 2 |
skin sebaceous gland | 7.87e-14 | 2 |
sweat gland | 7.87e-14 | 2 |
sweat gland placode | 7.87e-14 | 2 |
sebaceous gland placode | 7.87e-14 | 2 |
bronchus | 1.19e-12 | 5 |
skin epidermis | 5.61e-11 | 15 |
outer epithelium | 5.61e-11 | 15 |
enveloping layer of ectoderm | 5.61e-11 | 15 |
tracheobronchial tree | 5.98e-11 | 15 |
lower respiratory tract | 5.98e-11 | 15 |
mucosa | 3.46e-08 | 20 |
mammalian vulva | 4.11e-08 | 1 |
external female genitalia | 4.11e-08 | 1 |
tonsil | 8.12e-08 | 1 |
mucosa-associated lymphoid tissue | 8.12e-08 | 1 |
lymphoid tissue | 8.12e-08 | 1 |
tonsillar ring | 8.12e-08 | 1 |
cornea | 1.18e-07 | 4 |
eye surface | 1.18e-07 | 4 |
optic eminence | 1.18e-07 | 4 |
corneal primordium | 1.18e-07 | 4 |
mucosa of oral region | 1.44e-07 | 4 |
respiratory system mucosa | 1.44e-07 | 4 |
simple columnar epithelium | 3.08e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.17e-12 | 14 |
cystadenocarcinoma | 1.65e-08 | 1 |
mucinous cystadenocarcinoma | 1.65e-08 | 1 |
carcinoma | 6.20e-07 | 106 |