FFCP PHASE1:Hg19::chr1:226411644..226411666,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83881 | |EntrezGene=83881 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13363 | |HGNC=13363 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2W2 | |UniProt=Q9H2W2 | ||
|association_with_transcript=261bp_to_AF211891_5end | |association_with_transcript=261bp_to_AF211891_5end | ||
|cluster_id=chr1:226411644..226411666,+ | |||
|description=CAGE_peak_3_at_MIXL1_5end | |description=CAGE_peak_3_at_MIXL1_5end | ||
|id=chr1:226411644..226411666,+ | |id=chr1:226411644..226411666,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.45e-07!5;CL:0000039!4.75e-07!7;CL:0000586!4.75e-07!7 | |ontology_enrichment_celltype=CL:0002322!2.45e-07!5;CL:0000039!4.75e-07!7;CL:0000586!4.75e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000945;7.22e-27;24!CL:0000236;1.98e-22;13!CL:0000785;2.71e-19;1!CL:0000819;2.71e-19;1!CL:0000542;1.18e-09;53 | |ontology_enrichment_celltype_v019=CL:0000945;7.22e-27;24!CL:0000236;1.98e-22;13!CL:0000785;2.71e-19;1!CL:0000819;2.71e-19;1!CL:0000542;1.18e-09;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.66e-27,24;CL:0000826,8.66e-27,24;CL:0000236,8.13e-21,14;CL:0000819,2.25e-19,1;CL:0000838,2.46e-12,52;CL:0000542,4.22e-12,53;CL:0000051,4.22e-12,53;CL:0000785,2.27e-10,2;CL:0000955,2.27e-10,2;CL:0000818,2.27e-10,2;CL:0000954,2.27e-10,2;CL:0000816,2.27e-10,2;CL:0000817,2.47e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.71e-19;1!CL:0000954;2.48e-10;2!CL:0000051;1.18e-09;53 | |ontology_enrichment_development_v019=UBERON:0004140;2.71e-19;1!CL:0000954;2.48e-10;2!CL:0000051;1.18e-09;53 | ||
|ontology_enrichment_disease=DOID:3095!1.30e-07!22;DOID:2994!1.30e-07!22 | |ontology_enrichment_disease=DOID:3095!1.30e-07!22;DOID:2994!1.30e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:630;2.71e-19;1!DOID:0050177;2.71e-19;1!DOID:0060073;2.71e-19;1!DOID:8675;2.71e-19;1!DOID:0050427;2.71e-19;1!DOID:0060058;3.03e-08;10 | |ontology_enrichment_disease_v019=DOID:630;2.71e-19;1!DOID:0050177;2.71e-19;1!DOID:0060073;2.71e-19;1!DOID:8675;2.71e-19;1!DOID:0050427;2.71e-19;1!DOID:0060058;3.03e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.25e-19,1;DOID:8675,2.25e-19,1;DOID:630,3.91e-19,1;DOID:0050177,3.91e-19,1;DOID:0050427,3.91e-19,1;DOID:0060058,2.92e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.61e-10!115 | |ontology_enrichment_uberon=UBERON:0007023!1.61e-10!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0,1.20118796110804,1.14950487990897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.662648841607426,0.813357600086629,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694499979733169,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.134802265961354,0,0,1.45963831372533,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0.343609788497747,0.686379991447858,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47803639470798,0,0,0.630265458457789,0.494495150286999,0.337017719270924,0.0984274815147488,0,0,0,1.60753148465019,0.275078873194468,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.992332043623902,0.197611631897944,5.11528913199763,0,0,0,0,0,0.471162288750703,0,0.122026264901963,0,0,0.110929051536852,0,4.70385358783185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0,0,0.211312123358627,0,0.533458648470704,0,0,0,0,0,0,0,0.629063767423586,0,0,0,0,0,0,0.23658523500376,0,0,0,0,1.41696576325585,0.159633859057151,0,0,0.276629009856872,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439762066981716,0,0.385870790539723,0,0,0,0,0,0,0,0,0.751871343838829,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0.630832124175395,0.218531143927391,0.633492505057185,0.305966489225945,0.26721740526556,0.0918948995348449,0.250707539292375,0.151557396436479,0,0.829169439458779,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.875576689189638,0.143444410785353,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0,1.20118796110804,1.14950487990897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.662648841607426,0.813357600086629,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694499979733169,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.134802265961354,0,0,1.45963831372533,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0.343609788497747,0.686379991447858,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47803639470798,0,0,0.630265458457789,0.494495150286999,0.337017719270924,0.0984274815147488,0,0,0,1.60753148465019,0.275078873194468,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.992332043623902,0.197611631897944,5.11528913199763,0,0,0,0,0,0.471162288750703,0,0.122026264901963,0,0,0.110929051536852,0,4.70385358783185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0,0,0.211312123358627,0,0.533458648470704,0,0,0,0,0,0,0,0.629063767423586,0,0,0,0,0,0,0.23658523500376,0,0,0,0,1.41696576325585,0.159633859057151,0,0,0.276629009856872,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439762066981716,0,0.385870790539723,0,0,0,0,0,0,0,0,0.751871343838829,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0.630832124175395,0.218531143927391,0.633492505057185,0.305966489225945,0.26721740526556,0.0918948995348449,0.250707539292375,0.151557396436479,0,0.829169439458779,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.875576689189638,0.143444410785353,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | ||
|short_description=p3@MIXL1 | |short_description=p3@MIXL1 | ||
}} | }} |
Latest revision as of 01:27, 16 September 2015
Short description: | p3@MIXL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MIXL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 261bp_to_AF211891_5end |
EntrezGene: | MIXL1 |
HGNC: | 13363 |
UniProt: | Q9H2W2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.66e-27 | 24 |
pro-B cell | 8.66e-27 | 24 |
B cell | 8.13e-21 | 14 |
B-1 B cell | 2.25e-19 | 1 |
lymphoid lineage restricted progenitor cell | 2.46e-12 | 52 |
lymphocyte | 4.22e-12 | 53 |
common lymphoid progenitor | 4.22e-12 | 53 |
mature B cell | 2.27e-10 | 2 |
pre-B-II cell | 2.27e-10 | 2 |
transitional stage B cell | 2.27e-10 | 2 |
small pre-B-II cell | 2.27e-10 | 2 |
immature B cell | 2.27e-10 | 2 |
precursor B cell | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.25e-19 | 1 |
lymphosarcoma | 2.25e-19 | 1 |
genetic disease | 3.91e-19 | 1 |
monogenic disease | 3.91e-19 | 1 |
xeroderma pigmentosum | 3.91e-19 | 1 |
lymphoma | 2.92e-08 | 10 |