FFCP PHASE1:Hg19::chr2:217541501..217541514,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:217541501..217541514,+ | |||
|coexpression_cluster_id=C252 | |coexpression_cluster_id=C252 | ||
|description=CAGE_peak_at_chr2:217541501..217541514,+ | |description=CAGE_peak_at_chr2:217541501..217541514,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002622;3.70e-13;3!CL:0000197;1.86e-12;6!CL:0000098;1.86e-12;6!CL:0002167;1.86e-12;6!CL:0000499;1.16e-08;28!CL:0000327;3.40e-07;15!CL:0000214;4.72e-07;3!CL:0000632;5.54e-07;3 | |ontology_enrichment_celltype_v019=CL:0002622;3.70e-13;3!CL:0000197;1.86e-12;6!CL:0000098;1.86e-12;6!CL:0002167;1.86e-12;6!CL:0000499;1.16e-08;28!CL:0000327;3.40e-07;15!CL:0000214;4.72e-07;3!CL:0000632;5.54e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002622,8.05e-13,3;CL:0000197,1.87e-12,6;CL:0000098,1.87e-12,6;CL:0002167,1.87e-12,6;CL:0000499,1.24e-08,28;CL:0000327,2.88e-07,15;CL:0000214,4.46e-07,3;CL:0000632,5.02e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.74e-07,3;DOID:127,9.74e-07,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.05e-12;9!UBERON:0000042;7.05e-12;9!UBERON:0006915;4.72e-07;3!UBERON:0007616;4.72e-07;3!UBERON:0002217;4.72e-07;3!UBERON:0002018;4.72e-07;3!UBERON:0003688;8.49e-07;6!UBERON:0002358;8.49e-07;6!UBERON:0003684;8.49e-07;6!UBERON:0001178;8.49e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0004457;7.05e-12;9!UBERON:0000042;7.05e-12;9!UBERON:0006915;4.72e-07;3!UBERON:0007616;4.72e-07;3!UBERON:0002217;4.72e-07;3!UBERON:0002018;4.72e-07;3!UBERON:0003688;8.49e-07;6!UBERON:0002358;8.49e-07;6!UBERON:0003684;8.49e-07;6!UBERON:0001178;8.49e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,9.89e-09,12;UBERON:0000042,9.89e-09,12;UBERON:0006915,4.46e-07,3;UBERON:0007616,4.46e-07,3;UBERON:0002217,4.46e-07,3;UBERON:0002018,4.46e-07,3 | |||
|phase1_expression=0,0.642301571672949,0,1.0007329835313,1.34088328328186,1.74467704820074,0,0,1.56711376919903,0,0,0,0.263766978228454,0,0.331397375727916,0.672325146451775,0,0,0,0,0.204000691244253,0.940364164434263,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.59331170856906,0,0.486634870302636,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0.860509862246441,0.709336764396714,0,0,0.24666754841716,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,1.43723628363248,0,0,0,0,0,0.300476117813194,0,0.717558542755448,0,0,0,0,1.03056216018252,0,0,0,0.504867548488229,0.276149695926898,0.646584227275248,2.13005755509969,0,0,0,0,0,0,0,0.348581828608555,0.10366105501537,0.252320850875628,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,0,0,0.1466765716419,0.387815147273333,0,0,0.26593811658487,2.08014873822732,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,4.78332981520856,4.10386674233472,3.46945313074656,3.27995961979597,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,2.57366273829772,0,0,0.177561725313127,0,0.519254429183621,0.116210378459959,0,0,0,2.41110341145674,1.0925470080403,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,4.40737285562896,0,0,0,0,0.74129687641568,0,0,0,0.953150969619124,0,0.42793898803392,0.636406495851874,0,0,0.54907405947211,0.471249609382746,0,3.17020642346017,0,0,0.974853958525138,0,0.136499911407986,3.67654123079653,0,0,1.32687795048244,0.438450885253763,0,0.655894752046633,0,0,0,0.143411352204052,0.0982490410131212,0,0,4.01104507065562,3.95153871551882,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0.994147647766298,0,0,0,0.211125408127993,1.59398390600856,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0.291604613383254,0.347249989866585,0.885741385813839,0,1.52581736317083,0.221158519862449,0,0,0,0,0.769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.0969890164884194,0,1.80784592624426,0,0,0,0,0,0.426905989478705,0,0,0,0.171594997861965,0,0,0,0,0,0.917983958726896,0,0,0.136905378891993,0,0.429765441419957,0,0.837847203816763,0,0,0,0.429226048136571,0,0.268733889946905,5.76479813667846,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,0.315222829196793,0.262272940674991,0,0,0,0.714695326373367,0,0.76280561296425,1.62899880526114,0,3.26587360109409,0,0.082092520749339,1.36310417428337,0.113312091520126,0.146552233678082,0,0,0,0,0,0.213574825135389,0,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0.138348634936231,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.310525913752519,0,0,1.5652351854352,0,0.380805212168795,0.406870733204662,0.545545977607678,0.537052785212442,2.32016879939247,1.59238355479446,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0.617602894321944,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0.212574920101683,0,0,0,0,0,1.05802783107205,2.7562092961788,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,1.42899623863589,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0.546974809018219,0,1.48863353516788,0,0,0,0,3.64179362541979,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.857718530119876,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0,0.467878926924211,0,0,0,0,0,0,0.437119121007915,0,0.490296643507811,0,0.196308467114945,0,0,0.509781344063451,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0.371995018166751,0,0.865253124247578,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,1.27940389140589,0.714193294391221,0,0,0,0.827413057616144,0.404234377916439,0,1.36893320434112,0.0673520530145875,0,0,0,0,1.9307228228694,0,0,0.122241444182866,0.406896178315738,0,0.402547587182052,0 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|phase1_expression=0,0.642301571672949,0,1.0007329835313,1.34088328328186,1.74467704820074,0,0,1.56711376919903,0,0,0,0.263766978228454,0,0.331397375727916,0.672325146451775,0,0,0,0,0.204000691244253,0.940364164434263,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.59331170856906,0,0.486634870302636,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0.860509862246441,0.709336764396714,0,0,0.24666754841716,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,1.43723628363248,0,0,0,0,0,0.300476117813194,0,0.717558542755448,0,0,0,0,1.03056216018252,0,0,0,0.504867548488229,0.276149695926898,0.646584227275248,2.13005755509969,0,0,0,0,0,0,0,0.348581828608555,0.10366105501537,0.252320850875628,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,0,0,0.1466765716419,0.387815147273333,0,0,0.26593811658487,2.08014873822732,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,4.78332981520856,4.10386674233472,3.46945313074656,3.27995961979597,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,2.57366273829772,0,0,0.177561725313127,0,0.519254429183621,0.116210378459959,0,0,0,2.41110341145674,1.0925470080403,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,4.40737285562896,0,0,0,0,0.74129687641568,0,0,0,0.953150969619124,0,0.42793898803392,0.636406495851874,0,0,0.54907405947211,0.471249609382746,0,3.17020642346017,0,0,0.974853958525138,0,0.136499911407986,3.67654123079653,0,0,1.32687795048244,0.438450885253763,0,0.655894752046633,0,0,0,0.143411352204052,0.0982490410131212,0,0,4.01104507065562,3.95153871551882,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0.994147647766298,0,0,0,0.211125408127993,1.59398390600856,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0.291604613383254,0.347249989866585,0.885741385813839,0,1.52581736317083,0.221158519862449,0,0,0,0,0.769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.0969890164884194,0,1.80784592624426,0,0,0,0,0,0.426905989478705,0,0,0,0.171594997861965,0,0,0,0,0,0.917983958726896,0,0,0.136905378891993,0,0.429765441419957,0,0.837847203816763,0,0,0,0.429226048136571,0,0.268733889946905,5.76479813667846,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,0.315222829196793,0.262272940674991,0,0,0,0.714695326373367,0,0.76280561296425,1.62899880526114,0,3.26587360109409,0,0.082092520749339,1.36310417428337,0.113312091520126,0.146552233678082,0,0,0,0,0,0.213574825135389,0,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0.138348634936231,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.310525913752519,0,0,1.5652351854352,0,0.380805212168795,0.406870733204662,0.545545977607678,0.537052785212442,2.32016879939247,1.59238355479446,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0.617602894321944,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0.212574920101683,0,0,0,0,0,1.05802783107205,2.7562092961788,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,1.42899623863589,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0.546974809018219,0,1.48863353516788,0,0,0,0,3.64179362541979,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.857718530119876,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0,0.467878926924211,0,0,0,0,0,0,0.437119121007915,0,0.490296643507811,0,0.196308467114945,0,0,0.509781344063451,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0.371995018166751,0,0.865253124247578,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,1.27940389140589,0.714193294391221,0,0,0,0.827413057616144,0.404234377916439,0,1.36893320434112,0.0673520530145875,0,0,0,0,1.9307228228694,0,0,0.122241444182866,0.406896178315738,0,0.402547587182052,0 | ||
|short_description=p@chr2:217541501..217541514,+ | |short_description=p@chr2:217541501..217541514,+ | ||
}} | }} |
Latest revision as of 06:26, 29 July 2015
Short description: | p@chr2:217541501..217541514, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:217541501..217541514, + |
Coexpression cluster: | C252_hepatic_Olfactory_sacrococcigeal_leiomyoma_normal_Synoviocyte_glioblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 8.05e-13 | 3 |
receptor cell | 1.87e-12 | 6 |
sensory epithelial cell | 1.87e-12 | 6 |
olfactory epithelial cell | 1.87e-12 | 6 |
stromal cell | 1.24e-08 | 28 |
extracellular matrix secreting cell | 2.88e-07 | 15 |
synovial cell | 4.46e-07 | 3 |
hepatic stellate cell | 5.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 9.89e-09 | 12 |
serous membrane | 9.89e-09 | 12 |
stratified squamous epithelium | 4.46e-07 | 3 |
layer of synovial tissue | 4.46e-07 | 3 |
synovial joint | 4.46e-07 | 3 |
synovial membrane of synovial joint | 4.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.74e-07 | 3 |
leiomyoma | 9.74e-07 | 3 |