FFCP PHASE1:Hg19::chr17:47045949..47045964,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2695 | |EntrezGene=2695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4270 | |HGNC=4270 | ||
|TSSclassifier=strong | |||
|UniProt=P09681 | |UniProt=P09681 | ||
|association_with_transcript=0bp_to_ENST00000357424,NM_004123,uc002iol.1_5end | |association_with_transcript=0bp_to_ENST00000357424,NM_004123,uc002iol.1_5end | ||
|cluster_id=chr17:47045949..47045964,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_1_at_GIP_5end | |description=CAGE_peak_1_at_GIP_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000342!2.50e-10!1;CL:0002565!2.50e-10!1 | |ontology_enrichment_celltype=CL:0000342!2.50e-10!1;CL:0002565!2.50e-10!1 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;9.79e-26;1!UBERON:0003056;1.81e-09;3 | |ontology_enrichment_development_v019=UBERON:0000358;9.79e-26;1!UBERON:0003056;1.81e-09;3 | ||
|ontology_enrichment_disease=DOID:178!2.28e-10!1;DOID:326!2.28e-10!1;DOID:3978!2.28e-10!1;DOID:3394!2.28e-10!1;DOID:5844!2.28e-10!1 | |ontology_enrichment_disease=DOID:178!2.28e-10!1;DOID:326!2.28e-10!1;DOID:3978!2.28e-10!1;DOID:3394!2.28e-10!1;DOID:5844!2.28e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:5409;1.80e-07;4 | |ontology_enrichment_disease_v019=DOID:5409;1.80e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,1.80e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007029!1.89e-10!1;UBERON:0002506!2.50e-10!1;UBERON:0001769!2.50e-10!1;UBERON:0002336!3.61e-10!1;UBERON:0001018!3.61e-10!1;UBERON:0002473!3.61e-10!1;UBERON:0005340!3.61e-10!1;UBERON:0002316!3.61e-10!1;UBERON:0003544!3.61e-10!1;UBERON:0001020!3.61e-10!1;UBERON:0005970!3.61e-10!1;UBERON:0002437!3.61e-10!1;UBERON:0002363!4.33e-10!1;UBERON:0007647!4.33e-10!1;UBERON:0010115!4.33e-10!1;UBERON:0000488!7.16e-10!4;UBERON:0002370!8.56e-10!4;UBERON:0005058!8.56e-10!4;UBERON:0009113!8.56e-10!4;UBERON:0003295!8.56e-10!4;UBERON:0005562!8.56e-10!4;UBERON:0002203!7.30e-07!6;UBERON:0001768!7.30e-07!6;UBERON:0003351!8.22e-07!6 | |ontology_enrichment_uberon=UBERON:0007029!1.89e-10!1;UBERON:0002506!2.50e-10!1;UBERON:0001769!2.50e-10!1;UBERON:0002336!3.61e-10!1;UBERON:0001018!3.61e-10!1;UBERON:0002473!3.61e-10!1;UBERON:0005340!3.61e-10!1;UBERON:0002316!3.61e-10!1;UBERON:0003544!3.61e-10!1;UBERON:0001020!3.61e-10!1;UBERON:0005970!3.61e-10!1;UBERON:0002437!3.61e-10!1;UBERON:0002363!4.33e-10!1;UBERON:0007647!4.33e-10!1;UBERON:0010115!4.33e-10!1;UBERON:0000488!7.16e-10!4;UBERON:0002370!8.56e-10!4;UBERON:0005058!8.56e-10!4;UBERON:0009113!8.56e-10!4;UBERON:0003295!8.56e-10!4;UBERON:0005562!8.56e-10!4;UBERON:0002203!7.30e-07!6;UBERON:0001768!7.30e-07!6;UBERON:0003351!8.22e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.56e-45;4!UBERON:0000160;1.30e-22;17!UBERON:0005409;8.09e-18;22!UBERON:0004921;2.01e-10;33!UBERON:0002114;1.30e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0002108;2.56e-45;4!UBERON:0000160;1.30e-22;17!UBERON:0005409;8.09e-18;22!UBERON:0004921;2.01e-10;33!UBERON:0002114;1.30e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.56e-45,4;UBERON:0000160,1.30e-22,17;UBERON:0005409,8.00e-16,25;UBERON:0002114,1.30e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,226.982110515568,0,0,0,0,0.067401132980677,0,0,0,0,0,0,55.6557293823854,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553394539744923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.619678821295011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00225862292181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,25.3962593681941,0,153.113529686162,248.283660732495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,69.8315429480329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,4.69281884806909,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,226.982110515568,0,0,0,0,0.067401132980677,0,0,0,0,0,0,55.6557293823854,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553394539744923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.619678821295011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00225862292181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,25.3962593681941,0,153.113529686162,248.283660732495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,69.8315429480329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,4.69281884806909,0,0,0,0,0 | ||
|short_description=p1@GIP | |short_description=p1@GIP | ||
}} | }} |
Latest revision as of 19:27, 15 September 2015
Short description: | p1@GIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GIP_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000357424, NM_004123, uc002iol.1_5end |
EntrezGene: | GIP |
HGNC: | 4270 |
UniProt: | P09681 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 2.56e-45 | 4 |
intestine | 1.30e-22 | 17 |
gastrointestinal system | 8.00e-16 | 25 |
duodenum | 1.30e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.80e-07 | 4 |