FFCP PHASE1:Hg19::chr1:6510435..6510453,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:6510435..6510453,+
|short_description=p5@ESPN
|description=CAGE_peak_5_at_ESPN_5end
|association_with_transcript=1bp_to_ENST00000475479_5end
|EntrezGene=8...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83715 | |EntrezGene=83715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13281 | |HGNC=13281 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000475479_5end | |||
|cluster_id=chr1:6510435..6510453,+ | |||
|coexpression_cluster_id=C304 | |||
|description=CAGE_peak_5_at_ESPN_5end | |||
|id=chr1:6510435..6510453,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.08e-23!12;CL:0000417!2.08e-23!12;CL:0000668!2.08e-23!12;CL:0000414!2.08e-23!12;CL:0000412!2.08e-23!12;CL:0000182!2.08e-23!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.38e-31;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.27e-31,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.23e-34;11!UBERON:0009497;6.43e-29;13!UBERON:0001041;2.41e-12;30!UBERON:0003104;5.51e-12;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.52e-24!19;UBERON:0006925!5.52e-24!19;UBERON:0008836!5.52e-24!19;UBERON:0005057!5.50e-21!26;UBERON:0008835!1.66e-20!22;UBERON:0003894!1.66e-20!22;UBERON:0009854!1.51e-19!23;UBERON:0007499!7.34e-18!25;UBERON:0009497!7.34e-18!25;UBERON:0000015!7.34e-18!25;UBERON:0002423!7.34e-18!25;UBERON:0006235!7.34e-18!25;UBERON:0004161!7.34e-18!25;UBERON:0002365!2.72e-17!31;UBERON:0002330!2.72e-17!31;UBERON:0009856!4.09e-17!26;UBERON:0003929!1.42e-15!54;UBERON:0002368!4.44e-15!35;UBERON:0002530!5.52e-14!59;UBERON:0004921!1.36e-13!129;UBERON:0004185!1.36e-13!129;UBERON:0005172!5.91e-13!55;UBERON:0005173!5.91e-13!55;UBERON:0001007!6.90e-12!155;UBERON:0001555!6.90e-12!155;UBERON:0007026!6.90e-12!155;UBERON:0002417!1.89e-11!61;UBERON:0000916!1.89e-11!61;UBERON:0000949!2.52e-11!45;UBERON:0004119!1.52e-10!169;UBERON:0000925!1.52e-10!169;UBERON:0006595!1.52e-10!169;UBERON:0005911!2.28e-09!82;UBERON:0000160!2.35e-09!27;UBERON:0005409!4.03e-09!35;UBERON:0009569!3.50e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.24e-34;19!UBERON:0006925;1.24e-34;19!UBERON:0002423;3.94e-26;25!UBERON:0002365;3.98e-20;31!UBERON:0002330;3.98e-20;31!UBERON:0002368;2.06e-17;33!UBERON:0000949;1.86e-12;43!UBERON:0000160;1.43e-09;17!UBERON:0002108;1.80e-09;4!UBERON:0002417;8.02e-08;58!UBERON:0000916;8.02e-08;58!UBERON:0005172;8.51e-08;52!UBERON:0005173;8.51e-08;52!UBERON:0001007;1.08e-07;81!UBERON:0005409;1.58e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.25e-34,19;UBERON:0006925,1.25e-34,19;UBERON:0008836,1.25e-34,19;UBERON:0008835,8.38e-30,22;UBERON:0003894,8.38e-30,22;UBERON:0009854,1.79e-28,23;UBERON:0007499,3.94e-26,25;UBERON:0009497,3.94e-26,25;UBERON:0000015,3.94e-26,25;UBERON:0002423,3.94e-26,25;UBERON:0006235,3.94e-26,25;UBERON:0004161,3.94e-26,25;UBERON:0009856,4.29e-25,26;UBERON:0002365,6.52e-21,31;UBERON:0002330,6.52e-21,31;UBERON:0002368,2.00e-18,35;UBERON:0000949,3.92e-14,45;UBERON:0003929,1.26e-11,54;UBERON:0005172,1.26e-11,54;UBERON:0005173,1.26e-11,54;UBERON:0004921,5.49e-11,118;UBERON:0002530,1.46e-10,59;UBERON:0002417,2.27e-10,60;UBERON:0000916,2.27e-10,60;UBERON:0000160,1.46e-09,17;UBERON:0002108,1.84e-09,4;UBERON:0001007,1.28e-08,145;UBERON:0001555,1.28e-08,145;UBERON:0007026,1.28e-08,145;UBERON:0004119,1.20e-07,160;UBERON:0000925,1.20e-07,160;UBERON:0006595,1.20e-07,160;UBERON:0005911,2.48e-07,82;UBERON:0011216,5.82e-07,223;UBERON:0001041,7.42e-07,87 | |||
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|short_description=p5@ESPN | |||
}} | }} |
Latest revision as of 21:49, 18 September 2015
Short description: | p5@ESPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ESPN_5end |
Coexpression cluster: | [[Coexpression cluster:C304|]] |
Association with transcript: | 1bp_to_ENST00000475479_5end |
EntrezGene: | ESPN |
HGNC: | 13281 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.27e-31 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.25e-34 | 19 |
digestive gland | 1.25e-34 | 19 |
liver bud | 1.25e-34 | 19 |
hepatic diverticulum | 8.38e-30 | 22 |
liver primordium | 8.38e-30 | 22 |
digestive tract diverticulum | 1.79e-28 | 23 |
epithelial sac | 3.94e-26 | 25 |
epithelium of foregut-midgut junction | 3.94e-26 | 25 |
anatomical boundary | 3.94e-26 | 25 |
hepatobiliary system | 3.94e-26 | 25 |
foregut-midgut junction | 3.94e-26 | 25 |
septum transversum | 3.94e-26 | 25 |
sac | 4.29e-25 | 26 |
exocrine gland | 6.52e-21 | 31 |
exocrine system | 6.52e-21 | 31 |
endocrine gland | 2.00e-18 | 35 |
endocrine system | 3.92e-14 | 45 |
gut epithelium | 1.26e-11 | 54 |
abdomen element | 1.26e-11 | 54 |
abdominal segment element | 1.26e-11 | 54 |
subdivision of digestive tract | 5.49e-11 | 118 |
gland | 1.46e-10 | 59 |
abdominal segment of trunk | 2.27e-10 | 60 |
abdomen | 2.27e-10 | 60 |
intestine | 1.46e-09 | 17 |
small intestine | 1.84e-09 | 4 |
digestive system | 1.28e-08 | 145 |
digestive tract | 1.28e-08 | 145 |
primitive gut | 1.28e-08 | 145 |
endoderm-derived structure | 1.20e-07 | 160 |
endoderm | 1.20e-07 | 160 |
presumptive endoderm | 1.20e-07 | 160 |
endo-epithelium | 2.48e-07 | 82 |
organ system subdivision | 5.82e-07 | 223 |
foregut | 7.42e-07 | 87 |